Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_015_E22
(926 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q03265|ATPA_MOUSE ATP synthase alpha chain, mitochondria... 470 e-132
sp|P19483|ATPA1_BOVIN ATP synthase alpha chain heart isofor... 469 e-132
sp|P15999|ATPA_RAT ATP synthase alpha chain, mitochondrial ... 469 e-132
sp|P25705|ATPA_HUMAN ATP synthase alpha chain, mitochondria... 468 e-132
sp|P08428|ATPA_XENLA ATP synthase alpha chain, mitochondria... 466 e-131
sp|P35381|ATPA_DROME ATP synthase alpha chain, mitochondria... 461 e-129
sp|P24487|ATPA_SCHPO ATP synthase alpha chain, mitochondria... 399 e-111
sp|P26854|ATPAM_MARPO ATP synthase alpha chain, mitochondrial 397 e-110
sp|P49375|ATPA_KLULA ATP synthase alpha chain, mitochondria... 395 e-110
sp|P37211|ATPA_NEUCR ATP synthase alpha chain, mitochondria... 395 e-109
>sp|Q03265|ATPA_MOUSE ATP synthase alpha chain, mitochondrial precursor
Length = 553
Score = 470 bits (1209), Expect = e-132
Identities = 238/285 (83%), Positives = 260/285 (91%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VKRL++ADAMKYTI PLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAV
Sbjct: 260 VKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV 319
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSA
Sbjct: 320 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSA 379
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQ
Sbjct: 380 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQ 439
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK+
Sbjct: 440 YREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKL 499
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
+PSKITKFE +L +V+ HQ LL +IR G ISE +DAK+K+++
Sbjct: 500 EPSKITKFENAFLSHVISQHQSLLGNIRSDGKISEQSDAKLKEIV 544
>sp|P19483|ATPA1_BOVIN ATP synthase alpha chain heart isoform, mitochondrial precursor
Length = 553
Score = 469 bits (1208), Expect = e-132
Identities = 238/285 (83%), Positives = 259/285 (90%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VKRL++ADAMKYTI PLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAV
Sbjct: 260 VKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV 319
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSA
Sbjct: 320 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSA 379
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQ
Sbjct: 380 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQ 439
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK+
Sbjct: 440 YREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKL 499
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
+PSKITKFE +L +V+ HQ LL IR G ISE +DAK+K+++
Sbjct: 500 EPSKITKFENAFLSHVISQHQALLSKIRTDGKISEESDAKLKEIV 544
>sp|P15999|ATPA_RAT ATP synthase alpha chain, mitochondrial precursor
Length = 543
Score = 469 bits (1208), Expect = e-132
Identities = 238/285 (83%), Positives = 260/285 (91%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VKRL++ADAMKYTI PLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAV
Sbjct: 250 VKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV 309
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSA
Sbjct: 310 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSA 369
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQ
Sbjct: 370 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQ 429
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK+
Sbjct: 430 YREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKL 489
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
+PSKITKFE +L +V+ HQ LL +IR G ISE +DAK+K+++
Sbjct: 490 EPSKITKFESAFLSHVVSQHQSLLGNIRSDGKISEQSDAKLKEIV 534
>sp|P25705|ATPA_HUMAN ATP synthase alpha chain, mitochondrial precursor
Length = 553
Score = 468 bits (1205), Expect = e-132
Identities = 238/285 (83%), Positives = 259/285 (90%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VKRL++ADAMKYTI PLQYL+PYSGC+MGEYFRDNGKHALIIYDDLSKQAV
Sbjct: 260 VKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAV 319
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSA
Sbjct: 320 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSA 379
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQ
Sbjct: 380 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQ 439
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQQLL+RGVRLTELLKQGQY PMAIE+Q+ VIYAGVRGYLDK+
Sbjct: 440 YREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKL 499
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
+PSKITKFE +L +V+ HQ LL IR G ISE +DAK+K+++
Sbjct: 500 EPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIV 544
>sp|P08428|ATPA_XENLA ATP synthase alpha chain, mitochondrial precursor
Length = 545
Score = 466 bits (1199), Expect = e-131
Identities = 238/284 (83%), Positives = 257/284 (90%)
Frame = +3
Query: 6 KRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAVA 185
KRL++ADAMKYTI PLQYL+PYSGC+MGEYFRDNG HALIIYDDLSKQAVA
Sbjct: 253 KRLTDADAMKYTIVVSRTASDAAPLQYLAPYSGCSMGEYFRDNGTHALIIYDDLSKQAVA 312
Query: 186 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSAY 365
YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+D +GGGSLTALPVIETQAGDVSAY
Sbjct: 313 YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDHFGGGSLTALPVIETQAGDVSAY 372
Query: 366 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQY 545
IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQT+AMKQVAG MKLELAQY
Sbjct: 373 IPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQY 432
Query: 546 REVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKMD 725
REVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMAIE+Q+ VIYAGVRG+LDKM+
Sbjct: 433 REVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEEQVTVIYAGVRGHLDKME 492
Query: 726 PSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
PSKITKFE +L +V HQ+LL IR G ISE DAK+K+++
Sbjct: 493 PSKITKFESAFLAHVKSQHQELLATIRADGKISEQADAKLKEIV 536
>sp|P35381|ATPA_DROME ATP synthase alpha chain, mitochondrial precursor (Protein
bellwether)
Length = 552
Score = 461 bits (1186), Expect = e-129
Identities = 235/285 (82%), Positives = 256/285 (89%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VKRL+++ AM Y++ PLQYL+PYSGCAMGEYFRD GKHALIIYDDLSKQAV
Sbjct: 259 VKRLTDSGAMGYSVIVSATASDAAPLQYLAPYSGCAMGEYFRDKGKHALIIYDDLSKQAV 318
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS GGGSLTALPVIETQAGDVSA
Sbjct: 319 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPAMGGGSLTALPVIETQAGDVSA 378
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAG MKLELAQ
Sbjct: 379 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGSMKLELAQ 438
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQQLLNRGVRLTELLKQGQYVPMAIEDQ+ VIY GVRG+LDKM
Sbjct: 439 YREVAAFAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKM 498
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKML 857
DP+KITKFE+E+L+++ + Q LL I + G ISEA+DAK+K ++
Sbjct: 499 DPAKITKFEKEFLQHIKTSEQALLDTIAKDGAISEASDAKLKDIV 543
>sp|P24487|ATPA_SCHPO ATP synthase alpha chain, mitochondrial precursor
Length = 536
Score = 399 bits (1026), Expect = e-111
Identities = 197/289 (68%), Positives = 243/289 (84%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
V++L D++KY+I PLQYL+P+SGCAMGE+FRDNGKH L++YDDLSKQAV
Sbjct: 245 VQKLEENDSLKYSIIVAATASESAPLQYLAPFSGCAMGEWFRDNGKHGLVVYDDLSKQAV 304
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMS +GGGSLTALPVIETQ GDVSA
Sbjct: 305 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSPKHGGGSLTALPVIETQGGDVSA 364
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLE+ELF+KGIRPAINVGLSVSRVGSAAQ KAMKQVAG++KL LAQ
Sbjct: 365 YIPTNVISITDGQIFLESELFFKGIRPAINVGLSVSRVGSAAQVKAMKQVAGQIKLFLAQ 424
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVA+FAQFGSDLDA T+ L+RG+RLTELLKQ QY P+A+E+Q+ +IY GV+GYLDK+
Sbjct: 425 YREVASFAQFGSDLDAGTRATLDRGLRLTELLKQPQYSPLAVEEQVPLIYCGVKGYLDKI 484
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKMLQILL 869
++ +FE +++ + + ++++ IR+ GV+S+ + +K +++ L
Sbjct: 485 PVDRVVEFEHKFIPYLRSSGAEIMEAIRKEGVLSKTTEDSLKAVIKEFL 533
>sp|P26854|ATPAM_MARPO ATP synthase alpha chain, mitochondrial
Length = 513
Score = 397 bits (1019), Expect = e-110
Identities = 204/256 (79%), Positives = 223/256 (87%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VK LS A A++Y+I PLQ+L+PYSGCAMGEYFRDNG HALIIYDDLSKQ+V
Sbjct: 219 VKILSEAGALEYSIIVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQSV 278
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREA+PGDVFYLHSRLLERAAKMSD G GSLTALPVIETQAGDVSA
Sbjct: 279 AYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKMSDQTGAGSLTALPVIETQAGDVSA 338
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLETELFY+G RPAINVGLSVSRVGSAAQ KAMKQV G +KLELAQ
Sbjct: 339 YIPTNVISITDGQIFLETELFYRGSRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQ 398
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+TQ LLNRG RLTE+LKQ QY P+ IE QIVVIYA V+GYLD++
Sbjct: 399 YREVAAFAQFGSDLDAATQYLLNRGARLTEILKQAQYSPIPIEKQIVVIYAAVKGYLDQI 458
Query: 723 DPSKITKFEQEYLKNV 770
+ IT +EQE LK++
Sbjct: 459 PVALITHYEQELLKSI 474
>sp|P49375|ATPA_KLULA ATP synthase alpha chain, mitochondrial precursor
Length = 548
Score = 395 bits (1016), Expect = e-110
Identities = 202/282 (71%), Positives = 234/282 (82%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
V+ L DA+KY+I PLQY++P++ A+GE+FRDNG+HALIIYDDLSKQAV
Sbjct: 257 VQTLEQHDALKYSIIVAATASEAAPLQYIAPFTAAAIGEWFRDNGRHALIIYDDLSKQAV 316
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERAAKMS+ GGGSLTALPVIETQ GDVSA
Sbjct: 317 AYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSEKNGGGSLTALPVIETQGGDVSA 376
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLE ELFYKGIRPAINVGLSVSRVGSAAQ KA+KQVAG +KL LAQ
Sbjct: 377 YIPTNVISITDGQIFLEAELFYKGIRPAINVGLSVSRVGSAAQVKALKQVAGSLKLFLAQ 436
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDAST+Q L RG RLT+LLKQ QY P+A E+Q+ +IYAGV GYLD +
Sbjct: 437 YREVAAFAQFGSDLDASTKQTLARGERLTQLLKQNQYSPLAAEEQVPLIYAGVNGYLDNI 496
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMK 848
D S+I +FE ++L + NH +++ IRE G +S+ A +K
Sbjct: 497 DISRIAEFETKFLAYLKANHDEIVSAIREKGELSKELLATLK 538
>sp|P37211|ATPA_NEUCR ATP synthase alpha chain, mitochondrial precursor
Length = 551
Score = 395 bits (1014), Expect = e-109
Identities = 197/286 (68%), Positives = 238/286 (83%)
Frame = +3
Query: 3 VKRLSNADAMKYTIXXXXXXXXXXPLQYLSPYSGCAMGEYFRDNGKHALIIYDDLSKQAV 182
VK L DAMKY+I PLQYL+P++G +GEYFRDNGKH+L+I+DDL+KQAV
Sbjct: 258 VKTLEENDAMKYSIVVAATASEAAPLQYLAPFTGACVGEYFRDNGKHSLVIFDDLTKQAV 317
Query: 183 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSDVYGGGSLTALPVIETQAGDVSA 362
AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKM+ +GGGS+TALPVIETQ GDVSA
Sbjct: 318 AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNKTHGGGSMTALPVIETQGGDVSA 377
Query: 363 YIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTKAMKQVAGRMKLELAQ 542
YIPTNVISITDGQIFLE+ELFYKG+RPAINVGLSVSRVGSAAQ KAMKQVAG +KL LAQ
Sbjct: 378 YIPTNVISITDGQIFLESELFYKGVRPAINVGLSVSRVGSAAQLKAMKQVAGSLKLFLAQ 437
Query: 543 YREVAAFAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMAIEDQIVVIYAGVRGYLDKM 722
YREVAAFAQFGSDLDA+T+Q LNRG RLTELLKQ QY PMA+ + + +I+AGV G+LD +
Sbjct: 438 YREVAAFAQFGSDLDAATKQTLNRGERLTELLKQKQYSPMAVNEMVPLIFAGVNGFLDSV 497
Query: 723 DPSKITKFEQEYLKNVLVNHQDLLKDIRESGVISEANDAKMKKMLQ 860
+KI ++E ++L ++ N +++ I + G IS+ +AK++ ++Q
Sbjct: 498 PVAKILQWEADFLAHLKTNEPEIMATIDKEGAISKDLEAKLRDVIQ 543
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,539,399
Number of Sequences: 369166
Number of extensions: 1956662
Number of successful extensions: 5243
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5048
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9510757740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)