Planaria EST Database

DrC_00558

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00558
         (1043 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9QZ08|NAGK_MOUSE  N-acetylglucosamine kinase (GlcNAc kin...   184   4e-46
sp|Q9UJ70|NAGK_HUMAN  N-acetylglucosamine kinase (GlcNAc kin...   182   2e-45
sp|P20261|LIP1_CANRU  Lipase 1 precursor                           30   8.8  
sp|Q9A5F0|PURL_CAUCR  Phosphoribosylformylglycinamidine synt...    30   8.8  

>sp|Q9QZ08|NAGK_MOUSE N-acetylglucosamine kinase (GlcNAc kinase)
          Length = 343

 Score =  184 bits (467), Expect = 4e-46
 Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 5/335 (1%)
 Frame = +2

Query: 5    GVEGGSTATKAIILDRSGHIVSHVSGPHTNINLLGANEMAERIRSLLEECLIKGQRPVNS 184
            GVEGG T +K ++L   G I++   G  TN  L+G ++  ERI  +++    K       
Sbjct: 7    GVEGGGTRSKVLLLSEDGQILAEADGLSTNHWLIGTDQCVERINEMVDRAKQKAGVDPLV 66

Query: 185  RINYLGLSLSGIDTEAHTKLCIDAMLNIWKPGIDHIHVCNDTVGALRTGA-DAGIVLISG 361
             +  LGLSLSG + E   +L I+ + + +    ++  +  D  G++ T   D GIVLISG
Sbjct: 67   PLRSLGLSLSGGEQEDAVRLLIEELRHRFPNLSENYLITTDAAGSIATATPDGGIVLISG 126

Query: 362  TGSNCRLVHKDLTFHRVGGWGNLLGDEGSAYGIVNGGIKKIIDAEEGRIPMETPYSVFKE 541
            TGSNCRL++ D +    GGWG+++GDEGSAY I +  +K + D+ +            K+
Sbjct: 127  TGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGHVKQ 186

Query: 542  ILFKYLKISDIYELIPLYYHNFDKALIANMCPLLAQAAENGDKFCIDLFYEAGYILARLV 721
             +F Y ++ D   ++   Y +FDK   A  C  +A+ A  GD     +F +AG +L R V
Sbjct: 187  AMFDYFQVPDRLGILTHLYRDFDKCKFAGFCQKIAEGAHQGDPLSRYIFRKAGEMLGRHV 246

Query: 722  ATMARHCEPAILENPEGLPVVCVGGVWGSWNLLESGFIDGLKPKYENDI--VIKKICLKR 895
              +    +P + +   GLP++CVG VW SW LL+ GF+  L    E           L +
Sbjct: 247  VAVLPEIDPVLFQGELGLPILCVGSVWKSWELLKEGFLLALTLGREQQAQNSFSSFTLMK 306

Query: 896  LIVTAAYGAAII-ASELG-HSPIKPDYSSTFCVFF 994
            L  ++A G A + A  +G H P+  DYS     F+
Sbjct: 307  LRHSSALGGASLGARHIGYHLPM--DYSINAIAFY 339

>sp|Q9UJ70|NAGK_HUMAN N-acetylglucosamine kinase (GlcNAc kinase)
          Length = 344

 Score =  182 bits (461), Expect = 2e-45
 Identities = 106/334 (31%), Positives = 172/334 (51%), Gaps = 4/334 (1%)
 Frame = +2

Query: 5    GVEGGSTATKAIILDRSGHIVSHVSGPHTNINLLGANEMAERIRSLLEECLIKGQRPVNS 184
            GVEGG T ++ +++   G I++   G  TN  L+G ++  ERI  ++     K       
Sbjct: 7    GVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLV 66

Query: 185  RINYLGLSLSGIDTEAHTKLCIDAMLNIWKPGIDHIHVCNDTVGALRTGA-DAGIVLISG 361
             +  LGLSLSG D E   ++ I+ + + +    +   +  D  G++ T   D G+VLISG
Sbjct: 67   PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLISG 126

Query: 362  TGSNCRLVHKDLTFHRVGGWGNLLGDEGSAYGIVNGGIKKIIDAEEGRIPMETPYSVFKE 541
            TGSNCRL++ D +    GGWG+++GDEGSAY I +  +K + D+ +            K+
Sbjct: 127  TGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQ 186

Query: 542  ILFKYLKISDIYELIPLYYHNFDKALIANMCPLLAQAAENGDKFCIDLFYEAGYILARLV 721
             +F Y ++ D   ++   Y +FDK   A  C  +A+ A+ GD     +F +AG +L R +
Sbjct: 187  AMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHI 246

Query: 722  ATMARHCEPAILENPEGLPVVCVGGVWGSWNLLESGFIDGLKPKYE---NDIVIKKICLK 892
              +    +P + +   GLP++CVG VW SW LL+ GF+  L    E    +       +K
Sbjct: 247  VAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMK 306

Query: 893  RLIVTAAYGAAIIASELGHSPIKPDYSSTFCVFF 994
                +A  GA++ A  +GH  +  DYS+    F+
Sbjct: 307  LRHSSALGGASLGARHIGHL-LPMDYSANAIAFY 339

>sp|P20261|LIP1_CANRU Lipase 1 precursor
          Length = 549

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 380 LVHKDLTFHRVGGWGNLLGDEGSAYGIVNGGIK 478
           ++H  + + RV  WG L GDE  A G  N G+K
Sbjct: 164 IIHVSVNY-RVSSWGFLAGDEIKAEGSANAGLK 195

>sp|Q9A5F0|PURL_CAUCR Phosphoribosylformylglycinamidine synthase II (FGAM synthase II)
          Length = 739

 Score = 30.4 bits (67), Expect = 8.8
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +2

Query: 293 HVCNDTVGALRTGADAGIVLISGTG 367
           HV  DT+    TG DAGIV I GTG
Sbjct: 429 HVMADTLEDSATGCDAGIVRIHGTG 453

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,850,152
Number of Sequences: 369166
Number of extensions: 2569550
Number of successful extensions: 6714
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6710
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11292457220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00558

  1. Dr_sW_014_I08
  2. Dr_sW_012_E13
  3. Dr_sW_025_A23
  4. Dr_sW_017_M16
  5. Dr_sW_007_K14
  6. Dr_sW_022_O21
  7. Dr_sW_022_O04
  8. Dr_sW_023_E04