Planaria EST Database

DrC_00525

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00525
         (1416 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99JY0|ECHB_MOUSE  Trifunctional enzyme beta subunit, mit...   312   1e-84
sp|Q5R1W7|ECHB_PANTR  Trifunctional enzyme beta subunit, mit...   311   4e-84
sp|Q60587|ECHB_RAT  Trifunctional enzyme beta subunit, mitoc...   310   9e-84
sp|O46629|ECHB_BOVIN  Trifunctional enzyme beta subunit, mit...   310   9e-84
sp|Q8HXX4|ECHB_MACFA  Trifunctional enzyme beta subunit, mit...   310   9e-84
sp|P34255|YKA3_CAEEL  Hypothetical protein B0303.3 in chromo...   291   2e-78
sp|P76503|FADI_ECOLI  3-ketoacyl-CoA thiolase (Fatty acid ox...   179   2e-44
sp|P07871|THIKB_RAT  3-ketoacyl-CoA thiolase B, peroxisomal ...   121   6e-27
sp|P21775|THIKA_RAT  3-ketoacyl-CoA thiolase A, peroxisomal ...   121   6e-27
sp|Q12598|THIA_CANTR  Acetyl-CoA acetyltransferase IA (Perox...   120   7e-27

>sp|Q99JY0|ECHB_MOUSE Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
          Length = 475

 Score =  312 bits (800), Expect = 1e-84
 Identities = 151/209 (72%), Positives = 178/209 (85%)
 Frame = +3

Query: 678  PIKIPGIETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEE 857
            P K+PG +T +TKDNGIRPSS E+MA LKPAFIKP+GT+TAAN+SFLTDGASA L+ +E+
Sbjct: 267  PFKVPGKDT-VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSED 325

Query: 858  KAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAG 1037
            +A  MG+KPKAYLRDFIYVSQDPKDQLLLGP YATPK+L++  LT+ DI AFEFHEAF+G
Sbjct: 326  RALAMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSG 385

Query: 1038 QILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANR 1217
            QILAN KAMD D+F + YM R  K GS PL++ N WGGSLS+GHPFGATG RLV  AANR
Sbjct: 386  QILANFKAMDSDWFAQNYMGRKTKVGSPPLEKFNIWGGSLSLGHPFGATGCRLVMAAANR 445

Query: 1218 LIKEKGQFALVAACAAGGQGHAILIENYP 1304
            L K+ GQ+ALVAACAAGGQGHA+++E YP
Sbjct: 446  LRKDGGQYALVAACAAGGQGHAMIVEAYP 474


 Score =  290 bits (743), Expect = 5e-78
 Identities = 152/228 (66%), Positives = 178/228 (78%), Gaps = 4/228 (1%)
 Frame = +2

Query: 8   KPLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVIL 187
           K L  P  KN+V+++GVRIPFL+SGT YK++MPHDLARAAL GL  + N PK  VD +I 
Sbjct: 45  KTLAKPNMKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLHRTNIPKDVVDYIIF 104

Query: 188 GTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAG 367
           GTVIQEVKTSN+AREAALGAGFS+ TPAHTVTMACISSN A+T ++GL+A G  DV +AG
Sbjct: 105 GTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAG 164

Query: 368 GVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFS 535
           GVE +SD PIR SR +R  MLD  KAKT GQ+ SL S+     LSPE     LPAVAEFS
Sbjct: 165 GVELMSDVPIRHSRNMRKMMLDLNKAKTLGQRLSLLSKFRLNFLSPE-----LPAVAEFS 219

Query: 536 TSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           T+ETMGHSADRLAAAF +SR EQD YA+RSH+LAK+A + G L DIVP
Sbjct: 220 TNETMGHSADRLAAAFAVSRMEQDEYALRSHSLAKKAQDEGHLSDIVP 267

>sp|Q5R1W7|ECHB_PANTR Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
 sp|P55084|ECHB_HUMAN Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
          Length = 475

 Score =  311 bits (796), Expect = 4e-84
 Identities = 151/209 (72%), Positives = 175/209 (83%)
 Frame = +3

Query: 678  PIKIPGIETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEE 857
            P K+PG +T +TKDNGIRPSS E+MA LKPAFIKP+GT+TAAN+SFLTDGASA L+  EE
Sbjct: 267  PFKVPGKDT-VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEE 325

Query: 858  KAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAG 1037
            KA  MG+KPKAYLRDF+YVSQDPKDQLLLGP YATPK+L++  LT+ DI AFEFHEAF+G
Sbjct: 326  KALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSG 385

Query: 1038 QILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANR 1217
            QILAN KAMD D+F + YM R  K G  PL++ N WGGSLS+GHPFGATG RLV  AANR
Sbjct: 386  QILANFKAMDSDWFAENYMGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANR 445

Query: 1218 LIKEKGQFALVAACAAGGQGHAILIENYP 1304
            L KE GQ+ LVAACAAGGQGHA+++E YP
Sbjct: 446  LRKEGGQYGLVAACAAGGQGHAMIVEAYP 474


 Score =  286 bits (732), Expect = 1e-76
 Identities = 148/228 (64%), Positives = 179/228 (78%), Gaps = 4/228 (1%)
 Frame = +2

Query: 8   KPLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVIL 187
           K L  P  +N+V++DGVR PFL+SGT YK++MPHDLARAAL GL  + + PK+ VD +I 
Sbjct: 45  KTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYIIF 104

Query: 188 GTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAG 367
           GTVIQEVKTSN+AREAALGAGFS+ TPAHTVTMACIS+N A+T  +GL+A G  DV +AG
Sbjct: 105 GTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAG 164

Query: 368 GVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFS 535
           GVE +SD PIR SRK+R  MLD  KAK+ GQ+ SL S+     L+PE     LPAV+EFS
Sbjct: 165 GVELMSDVPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRFNFLAPE-----LPAVSEFS 219

Query: 536 TSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           TSETMGHSADRLAAAF +SR EQD YA+RSH+LAK+A + GLL D+VP
Sbjct: 220 TSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVP 267

>sp|Q60587|ECHB_RAT Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
          Length = 475

 Score =  310 bits (793), Expect = 9e-84
 Identities = 149/209 (71%), Positives = 178/209 (85%)
 Frame = +3

Query: 678  PIKIPGIETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEE 857
            P K+PG +T ++KDNGIRPSS E+MA LKPAFIKP+GT+TAAN+SFLTDGASA L+ +E+
Sbjct: 267  PFKVPGKDT-VSKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMSED 325

Query: 858  KAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAG 1037
            +A  MG+KPKAYLRDFIYVSQDPKDQLLLGP YATPK+L++  LT+ DI AFEFHEAF+G
Sbjct: 326  RALAMGYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSG 385

Query: 1038 QILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANR 1217
            QILAN KAMD D+F + YM R  K G+ PL++ N WGGSLS+GHPFGATG RLV  AANR
Sbjct: 386  QILANFKAMDSDWFAQNYMGRKTKVGAPPLEKFNIWGGSLSLGHPFGATGCRLVMAAANR 445

Query: 1218 LIKEKGQFALVAACAAGGQGHAILIENYP 1304
            L K+ GQ+ALVAACAAGGQGHA+++E YP
Sbjct: 446  LRKDGGQYALVAACAAGGQGHAMIVEAYP 474


 Score =  286 bits (733), Expect = 8e-77
 Identities = 150/228 (65%), Positives = 177/228 (77%), Gaps = 4/228 (1%)
 Frame = +2

Query: 8   KPLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVIL 187
           K L  P  KN+V+++GVRIPFL+SGT YK++MPHDLARAAL GL  + N PK  VD +I 
Sbjct: 45  KTLAKPNLKNIVVVEGVRIPFLLSGTSYKDLMPHDLARAALSGLLYRTNIPKDVVDYIIF 104

Query: 188 GTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAG 367
           GTVIQEVKTSN+AREAALGAGFS+ TPAHTVTMACISSN A+T ++GL+A G  DV +AG
Sbjct: 105 GTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAG 164

Query: 368 GVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFS 535
           GVE +SD PIR SR +R  MLD  KAKT  Q+ SL ++     LSPE     LPAVAEFS
Sbjct: 165 GVELMSDVPIRHSRNMRKMMLDLNKAKTLAQRLSLLTKFRLNFLSPE-----LPAVAEFS 219

Query: 536 TSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           T+ETMGHSADRLAAAF +SR EQD YA+RSH+LAK+A + G L DIVP
Sbjct: 220 TNETMGHSADRLAAAFAVSRMEQDKYALRSHSLAKKAQDEGHLSDIVP 267

>sp|O46629|ECHB_BOVIN Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
          Length = 475

 Score =  310 bits (793), Expect = 9e-84
 Identities = 150/209 (71%), Positives = 176/209 (84%)
 Frame = +3

Query: 678  PIKIPGIETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEE 857
            P K+PG +T +T+DNGIRPSS ++MA LKPAFIKP+GT+TAAN+SFLTDGASA L+  EE
Sbjct: 267  PFKVPGRDT-VTQDNGIRPSSLDQMAKLKPAFIKPYGTVTAANSSFLTDGASAVLIMAEE 325

Query: 858  KAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAG 1037
            KA  MG+KPKAYLRDF+YVSQDPKDQLLLGP YATPK+L++  LT+ DI  FEFHEAF+G
Sbjct: 326  KALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDVFEFHEAFSG 385

Query: 1038 QILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANR 1217
            QILANLKAMD D+F + YM R AK G  PL++ N WGGSLS+GHPFGATG RLV  AANR
Sbjct: 386  QILANLKAMDSDWFAQNYMGRKAKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANR 445

Query: 1218 LIKEKGQFALVAACAAGGQGHAILIENYP 1304
            L KE GQ+ LVAACAAGGQGHA+++E YP
Sbjct: 446  LRKEGGQYGLVAACAAGGQGHAMIVEAYP 474


 Score =  290 bits (742), Expect = 7e-78
 Identities = 151/228 (66%), Positives = 179/228 (78%), Gaps = 4/228 (1%)
 Frame = +2

Query: 8   KPLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVIL 187
           K L  P  +N+V++DGVR PFL+SGT YK++MPHDLARAAL GL  + + PK  VD +I 
Sbjct: 45  KTLAKPNIRNIVVVDGVRTPFLLSGTSYKDLMPHDLARAALSGLLHRTSVPKDVVDYIIF 104

Query: 188 GTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAG 367
           GTVIQEVKTSN+AREAALGAGFS+ TPAHTVTMACISSN A+T ++GL+A G  DV +AG
Sbjct: 105 GTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAG 164

Query: 368 GVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFS 535
           GVE +SD PIR SRK+R  MLD  KAKT  Q+ S+ S+     LSPE     LPAV+EFS
Sbjct: 165 GVELMSDIPIRHSRKMRKMMLDLNKAKTLAQRLSIISKFRLNFLSPE-----LPAVSEFS 219

Query: 536 TSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           TSETMGHSADRLAAAF ISREEQD YA+RSH+LAK+A + GLL D+VP
Sbjct: 220 TSETMGHSADRLAAAFAISREEQDEYALRSHSLAKKAQDEGLLSDVVP 267

>sp|Q8HXX4|ECHB_MACFA Trifunctional enzyme beta subunit, mitochondrial precursor (TP-beta)
            [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
            acyltransferase) (Beta-ketothiolase)]
          Length = 475

 Score =  310 bits (793), Expect = 9e-84
 Identities = 150/209 (71%), Positives = 175/209 (83%)
 Frame = +3

Query: 678  PIKIPGIETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEE 857
            P ++PG +T +TKDNGIRPSS E+MA LKPAFIKP+GT+TAAN+SFLTDGASA L+  EE
Sbjct: 267  PFRVPGKDT-VTKDNGIRPSSLEQMAKLKPAFIKPYGTVTAANSSFLTDGASAMLIMAEE 325

Query: 858  KAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAG 1037
            KA  MG+KPKAYLRDF+YVSQDPKDQLLLGP YATPK+L++  LT+ DI AFEFHEAF+G
Sbjct: 326  KALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEKAGLTMNDIDAFEFHEAFSG 385

Query: 1038 QILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANR 1217
            QILAN KAMD D+F + YM R  K G  PL++ N WGGSLS+GHPFGATG RLV  AANR
Sbjct: 386  QILANFKAMDSDWFAENYMGRKTKVGLPPLEKFNNWGGSLSLGHPFGATGCRLVMAAANR 445

Query: 1218 LIKEKGQFALVAACAAGGQGHAILIENYP 1304
            L KE GQ+ LVAACAAGGQGHA+++E YP
Sbjct: 446  LRKEGGQYGLVAACAAGGQGHAMIVEAYP 474


 Score =  287 bits (734), Expect = 6e-77
 Identities = 149/228 (65%), Positives = 179/228 (78%), Gaps = 4/228 (1%)
 Frame = +2

Query: 8   KPLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVIL 187
           K L  P  +N+V++DGVR PFL+SGT YK++MPHDLARAAL GL  + + PK+ VD +I 
Sbjct: 45  KTLAKPNIRNVVVVDGVRTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYIIF 104

Query: 188 GTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAG 367
           GTVIQEVKTSN+AREAALGAGFS+ TPAHTVTMACIS+N A+T  +GL+A G  DV +AG
Sbjct: 105 GTVIQEVKTSNVAREAALGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAG 164

Query: 368 GVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFS 535
           GVE +SD PIR SRK+R  MLD  KAK+ GQ+ SL S+     L+PE     LPAVAEFS
Sbjct: 165 GVELMSDIPIRHSRKMRKLMLDLNKAKSMGQRLSLISKFRLNFLAPE-----LPAVAEFS 219

Query: 536 TSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           TSETMGHSADRLAAAF +SR EQD YA+RSH+LAK+A + GLL D+VP
Sbjct: 220 TSETMGHSADRLAAAFAVSRLEQDEYALRSHSLAKKAQDEGLLSDVVP 267

>sp|P34255|YKA3_CAEEL Hypothetical protein B0303.3 in chromosome III
          Length = 448

 Score =  291 bits (746), Expect = 2e-78
 Identities = 138/198 (69%), Positives = 167/198 (84%)
 Frame = +3

Query: 708  ITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 887
            I +DNGIR S+ EK+++LKPAF+KPHGT+TAANAS+LTDGASA L+ TEE A   G+KPK
Sbjct: 249  IKEDNGIRVSTLEKLSSLKPAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPK 308

Query: 888  AYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAGQILANLKAMD 1067
            AYLRD++YV+QDPKDQLLL PAY  PK+LD+  LTLKD+  FE HEAFAGQ+LANL AMD
Sbjct: 309  AYLRDYLYVAQDPKDQLLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMD 368

Query: 1068 CDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANRLIKEKGQFAL 1247
             D+FCKE MKR  K+G +P+D+LN WGGSLSIGHPFGATGVRL T +A+RL +EKGQ+A+
Sbjct: 369  SDYFCKEQMKRSGKFGRVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQYAV 428

Query: 1248 VAACAAGGQGHAILIENY 1301
            +AACAAGG G  +LIE Y
Sbjct: 429  IAACAAGGHGVGMLIEAY 446


 Score =  236 bits (602), Expect = 1e-61
 Identities = 127/219 (57%), Positives = 154/219 (70%), Gaps = 4/219 (1%)
 Frame = +2

Query: 35  NLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKT 214
           N+VL+D VR PF+VSGT +K++M  DL + A+  L +K   P + +D++I GTVIQE KT
Sbjct: 25  NIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKT 84

Query: 215 SNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAP 394
           SNIAREAAL AG  +  PAHTVT+ACISSN+A+T  MG+LA G  +  IAGGVE LSD P
Sbjct: 85  SNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVP 144

Query: 395 IRFSRKVRSTMLDFRKAKTFGQK----ASLFSRLLSPETFSVDLPAVAEFSTSETMGHSA 562
           IR++R  R  ML   KAK    K      +   LLSPE     LPAVAEFST ETMGHS 
Sbjct: 145 IRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPE-----LPAVAEFSTGETMGHSG 199

Query: 563 DRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIVP 679
           DRLAAAF +SR EQD +A+RSHTLA EAA+NG   D+VP
Sbjct: 200 DRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTDVVP 238

>sp|P76503|FADI_ECOLI 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit)
            (Beta-ketothiolase) (Acetyl-CoA acyltransferase)
            (Acyl-CoA ligase) (ACSs)
          Length = 436

 Score =  179 bits (453), Expect = 2e-44
 Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 1/204 (0%)
 Frame = +3

Query: 687  IPGIETPITKDNGIRP-SSKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEEKA 863
            IP  + P+ +DN IR  SS    A L+PAF + HGT+TAAN++ LTDGA+A +L TE +A
Sbjct: 231  IPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRA 290

Query: 864  KQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAGQI 1043
            K++G  P  YLR + + + D    +LLGPA++TP  L+R  LT+ D+T  + HEAFA Q 
Sbjct: 291  KELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQT 350

Query: 1044 LANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANRLI 1223
            LAN++ +  + F +E + R    G +   + N  GGS++ GHPF ATG R++T   + L 
Sbjct: 351  LANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELR 410

Query: 1224 KEKGQFALVAACAAGGQGHAILIE 1295
            +  G F LV ACAAGG G A+++E
Sbjct: 411  RRGGGFGLVTACAAGGLGAAMVLE 434


 Score =  140 bits (352), Expect = 1e-32
 Identities = 80/222 (36%), Positives = 122/222 (54%)
 Frame = +2

Query: 11  PLKSPGGKNLVLIDGVRIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILG 190
           PL +  G  + ++ G+R PF    T +  +   DL +  +  L  +   P + ++ ++ G
Sbjct: 6   PLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFG 65

Query: 191 TVIQEVKTSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGG 370
            V+Q  +  NIARE  LG G +  T A++V+ AC +S  A+ N    L  G I   IAGG
Sbjct: 66  QVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGG 125

Query: 371 VEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLFSRLLSPETFSVDLPAVAEFSTSETM 550
            +  S  PI  S+K+   ++D  KA+T  Q+  LFSRL   +   V  PAVAE+ST   M
Sbjct: 126 ADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVP-PAVAEYSTGLRM 184

Query: 551 GHSADRLAAAFGISREEQDLYAMRSHTLAKEAAENGLLDDIV 676
           G +A+++A  +GI+RE+QD  A RSH  A +A  +G L + V
Sbjct: 185 GDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEV 226

>sp|P07871|THIKB_RAT 3-ketoacyl-CoA thiolase B, peroxisomal precursor (Beta-ketothiolase
            B) (Acetyl-CoA acyltransferase B) (Peroxisomal
            3-oxoacyl-CoA thiolase B)
          Length = 424

 Score =  121 bits (303), Expect = 6e-27
 Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
 Frame = +3

Query: 708  ITKDNGIRPS-SKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKP 884
            +++D G+RPS + E +A LKPAF K  G+ TA N+S ++DGA+A LL    KA+++G   
Sbjct: 242  VSQDEGVRPSTTMEGLAKLKPAF-KDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPI 300

Query: 885  KAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAGQILANLKAM 1064
               LR +  V   P D + +GPAYA P  L +  LT+ DI  FE +EAFA Q L      
Sbjct: 301  LGVLRSYAVVGV-PPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAL------ 353

Query: 1065 DCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANRLIKEKGQ-- 1238
                +C E +        +P +++N  GG++++GHP G TG R V T  N L K +G+  
Sbjct: 354  ----YCVEKL-------GIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNEL-KRRGRRA 401

Query: 1239 FALVAACAAGGQGHAILIENYP 1304
            + +V+ C   G G A + E YP
Sbjct: 402  YGVVSMCIGTGMGAAAVFE-YP 422


 Score = 68.6 bits (166), Expect = 4e-11
 Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 35  NLVLIDGVRIPFLVSGTD-YKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVK 211
           ++V++ G R P   +G   +K+  P +L  A L  + + +    +C+ ++ +G V+Q   
Sbjct: 37  DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGA 96

Query: 212 TSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDA 391
            + +AR A   +G  E+ P   V   C S   A+ N  G +  G+ D+ +A GVE ++ +
Sbjct: 97  GAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMTLS 156

Query: 392 PIRFSRKVRSTMLDFRKAKTFGQKASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRL 571
                  + S +L+  KA+            L P                  MG +++ +
Sbjct: 157 ERGNPGNISSRLLENEKARD----------CLIP------------------MGITSENV 188

Query: 572 AAAFGISREEQDLYAMRSHTLAKEAAENGLL-DDIVP 679
           A  FGISR++QD +A+ S   A  A   G    +IVP
Sbjct: 189 AERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVP 225

>sp|P21775|THIKA_RAT 3-ketoacyl-CoA thiolase A, peroxisomal precursor (Beta-ketothiolase
            A) (Acetyl-CoA acyltransferase A) (Peroxisomal
            3-oxoacyl-CoA thiolase A)
          Length = 424

 Score =  121 bits (303), Expect = 6e-27
 Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 3/202 (1%)
 Frame = +3

Query: 708  ITKDNGIRPS-SKEKMATLKPAFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKP 884
            +++D G+RPS + E +A LKPAF K  G+ TA N+S ++DGA+A LL    KA+++G   
Sbjct: 242  VSQDEGVRPSTTMEGLAKLKPAF-KDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPI 300

Query: 885  KAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHEAFAGQILANLKAM 1064
               LR +  V   P D + +GPAYA P  L +  LT+ DI  FE +EAFA Q L      
Sbjct: 301  LGVLRSYAVVGV-PPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAL------ 353

Query: 1065 DCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTTAANRLIKEKGQ-- 1238
                +C E +        +P +++N  GG++++GHP G TG R V T  N L K +G+  
Sbjct: 354  ----YCVEKL-------GIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNEL-KRRGRRA 401

Query: 1239 FALVAACAAGGQGHAILIENYP 1304
            + +V+ C   G G A + E YP
Sbjct: 402  YGVVSMCIGTGMGAAAVFE-YP 422


 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
 Frame = +2

Query: 35  NLVLIDGVRIPFLVSGTD-YKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVK 211
           ++V++ G R P   +G   +K+  P +L  A L  + + +    +C+ ++ +G V++   
Sbjct: 37  DVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGA 96

Query: 212 TSNIAREAALGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDA 391
            + +AR A   +G  E+ P   V   C S   A+ N  G +  G+ D+ +A GVE +S +
Sbjct: 97  GAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSLS 156

Query: 392 PIRFSRKVRSTMLDFRKAKTFGQKASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRL 571
                  + S +L+  KA+            L P                  MG +++ +
Sbjct: 157 NRGNPGNISSRLLESDKARD----------CLIP------------------MGITSENV 188

Query: 572 AAAFGISREEQDLYAMRSHTLAKEAAENGLL-DDIVP 679
           A  FGISR++QD +A+ S   A  A   G    +IVP
Sbjct: 189 AERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVP 225

>sp|Q12598|THIA_CANTR Acetyl-CoA acetyltransferase IA (Peroxisomal acetoacetyl-CoA
            thiolase) (Thiolase IA)
          Length = 403

 Score =  120 bits (302), Expect = 7e-27
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%)
 Frame = +3

Query: 678  PIKIPGI----ETPITKDNGIRPSSKEKMATLKPAFIKPHGTITAANASFLTDGASACLL 845
            P+ I G     +T I  D  I   ++E++ + +  F K +GT+TA NAS L DG +A +L
Sbjct: 204  PVTIKGFRGKPDTVIENDEEIGKFNEERLKSARTVFQKENGTVTAPNASKLNDGGAALVL 263

Query: 846  TTEEKAKQMGWKPKAYLRDFIYVSQDPKDQLLLGPAYATPKILDRNKLTLKDITAFEFHE 1025
             +E K KQ+G KP A +  +   ++ P D   + PA A PK +    LT+  +  FE +E
Sbjct: 264  VSEAKLKQLGLKPLAKISGWGEAARTPFD-FTIAPALAVPKAVKHAGLTVDRVDFFELNE 322

Query: 1026 AFAGQILANLKAMDCDFFCKEYMKRPAKYGSLPLDRLNTWGGSLSIGHPFGATGVRLVTT 1205
            AF+   LAN                 A+  ++PL++LN +GG++++GHP G +G R++ T
Sbjct: 323  AFSVVGLAN-----------------AELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVT 365

Query: 1206 AANRLIKEKGQFALVAACAAGGQGHAILIE 1295
              + L +E G+F +   C  GG   A++IE
Sbjct: 366  LLSVLTQEGGRFGVAGVCNGGGGASAVVIE 395


 Score = 63.5 bits (153), Expect = 1e-09
 Identities = 48/181 (26%), Positives = 74/181 (40%)
 Frame = +2

Query: 116 ARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAALGAGFSESTPAHTVTMACI 295
           A A    L K      Q VD ++ G V+Q       AR+ AL AG  +S  A T+   C 
Sbjct: 33  AHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIVASTINKVCA 92

Query: 296 SSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKASLF 475
           S   A+      + CG  D+ + GG E +S+ P          +   R    +G    + 
Sbjct: 93  SGMKAVIIGAQNIICGTSDIVVVGGAESMSNTPY--------YLPSARSGARYGDAIMV- 143

Query: 476 SRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAAEN 655
                     V    + +    + MG +A++ A   G SRE+QD +A+ S+  A +A   
Sbjct: 144 --------DGVQKDGLLDVYEEKLMGVAAEKCAKDHGFSREDQDNFAINSYKKAGKALSE 195

Query: 656 G 658
           G
Sbjct: 196 G 196

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,510,103
Number of Sequences: 369166
Number of extensions: 3133564
Number of successful extensions: 8444
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8287
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16884382830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00525

  1. Dr_sW_013_L12
  2. Dr_sW_006_O09
  3. Dr_sW_024_P13
  4. Dr_sW_009_B19
  5. Dr_sW_007_I21
  6. Dr_sW_011_G23