Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_O09
(928 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99JY0|ECHB_MOUSE Trifunctional enzyme beta subunit, mit... 368 e-101
sp|O46629|ECHB_BOVIN Trifunctional enzyme beta subunit, mit... 367 e-101
sp|Q5R1W7|ECHB_PANTR Trifunctional enzyme beta subunit, mit... 366 e-101
sp|Q8HXX4|ECHB_MACFA Trifunctional enzyme beta subunit, mit... 366 e-101
sp|Q60587|ECHB_RAT Trifunctional enzyme beta subunit, mitoc... 363 e-100
sp|P34255|YKA3_CAEEL Hypothetical protein B0303.3 in chromo... 304 3e-82
sp|P76503|FADI_ECOLI 3-ketoacyl-CoA thiolase (Fatty acid ox... 187 4e-47
sp|P44873|ATOB_HAEIN Acetyl-CoA acetyltransferase (Acetoace... 119 1e-26
sp|P46707|THIL_MYCLE Probable acetyl-CoA acetyltransferase ... 113 9e-25
sp|P45369|THIL_CHRVI Acetyl-CoA acetyltransferase (Acetoace... 112 2e-24
>sp|Q99JY0|ECHB_MOUSE Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
Length = 475
Score = 368 bits (945), Expect = e-101
Identities = 192/280 (68%), Positives = 226/280 (80%), Gaps = 4/280 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
RIPFL+SGT YK++MPHDLARAAL GL + N PK VD +I GTVIQEVKTSN+AREAA
Sbjct: 62 RIPFLLSGTSYKDLMPHDLARAALSGLLHRTNIPKDVVDYIIFGTVIQEVKTSNVAREAA 121
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LGAGFS+ TPAHTVTMACISSN A+T ++GL+A G DV +AGGVE +SD PIR SR +R
Sbjct: 122 LGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMR 181
Query: 363 STMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
MLD KAKT GQ+ SL S+ LSPE LPAVAEFST+ETMGHSADRLAAAF
Sbjct: 182 KMMLDLNKAKTLGQRLSLLSKFRLNFLSPE-----LPAVAEFSTNETMGHSADRLAAAFA 236
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIETPITKDNGIRPSSKEKMATLKP 710
+SR EQD YA+RSH+LAK+A + G L DIVP K+PG +T +TKDNGIRPSS E+MA LKP
Sbjct: 237 VSRMEQDEYALRSHSLAKKAQDEGHLSDIVPFKVPGKDT-VTKDNGIRPSSLEQMAKLKP 295
Query: 711 AFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
AFIKP+GT+TAAN+SFLTDGASA L+ +E++A MG+KPK
Sbjct: 296 AFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPK 335
Score = 64.3 bits (155), Expect = 5e-10
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +2
Query: 815 GLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
G + +AYLRDFIYVSQDPKDQLLLGP YATPK+L++
Sbjct: 331 GYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEK 366
>sp|O46629|ECHB_BOVIN Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
Length = 475
Score = 367 bits (942), Expect = e-101
Identities = 191/280 (68%), Positives = 226/280 (80%), Gaps = 4/280 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
R PFL+SGT YK++MPHDLARAAL GL + + PK VD +I GTVIQEVKTSN+AREAA
Sbjct: 62 RTPFLLSGTSYKDLMPHDLARAALSGLLHRTSVPKDVVDYIIFGTVIQEVKTSNVAREAA 121
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LGAGFS+ TPAHTVTMACISSN A+T ++GL+A G DV +AGGVE +SD PIR SRK+R
Sbjct: 122 LGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDIPIRHSRKMR 181
Query: 363 STMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
MLD KAKT Q+ S+ S+ LSPE LPAV+EFSTSETMGHSADRLAAAF
Sbjct: 182 KMMLDLNKAKTLAQRLSIISKFRLNFLSPE-----LPAVSEFSTSETMGHSADRLAAAFA 236
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIETPITKDNGIRPSSKEKMATLKP 710
ISREEQD YA+RSH+LAK+A + GLL D+VP K+PG +T +T+DNGIRPSS ++MA LKP
Sbjct: 237 ISREEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGRDT-VTQDNGIRPSSLDQMAKLKP 295
Query: 711 AFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
AFIKP+GT+TAAN+SFLTDGASA L+ EEKA MG+KPK
Sbjct: 296 AFIKPYGTVTAANSSFLTDGASAVLIMAEEKALAMGYKPK 335
Score = 63.5 bits (153), Expect = 8e-10
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +2
Query: 800 KSKTDGLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
K+ G + +AYLRDF+YVSQDPKDQLLLGP YATPK+L++
Sbjct: 326 KALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEK 366
>sp|Q5R1W7|ECHB_PANTR Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
sp|P55084|ECHB_HUMAN Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
Length = 475
Score = 366 bits (940), Expect = e-101
Identities = 190/280 (67%), Positives = 226/280 (80%), Gaps = 4/280 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
R PFL+SGT YK++MPHDLARAAL GL + + PK+ VD +I GTVIQEVKTSN+AREAA
Sbjct: 62 RTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAA 121
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LGAGFS+ TPAHTVTMACIS+N A+T +GL+A G DV +AGGVE +SD PIR SRK+R
Sbjct: 122 LGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDVPIRHSRKMR 181
Query: 363 STMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
MLD KAK+ GQ+ SL S+ L+PE LPAV+EFSTSETMGHSADRLAAAF
Sbjct: 182 KLMLDLNKAKSMGQRLSLISKFRFNFLAPE-----LPAVSEFSTSETMGHSADRLAAAFA 236
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIETPITKDNGIRPSSKEKMATLKP 710
+SR EQD YA+RSH+LAK+A + GLL D+VP K+PG +T +TKDNGIRPSS E+MA LKP
Sbjct: 237 VSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFKVPGKDT-VTKDNGIRPSSLEQMAKLKP 295
Query: 711 AFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
AFIKP+GT+TAAN+SFLTDGASA L+ EEKA MG+KPK
Sbjct: 296 AFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPK 335
Score = 63.9 bits (154), Expect = 6e-10
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 779 MFINY*RKSKTDGLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
M I K+ G + +AYLRDF+YVSQDPKDQLLLGP YATPK+L++
Sbjct: 319 MLIMAEEKALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEK 366
>sp|Q8HXX4|ECHB_MACFA Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
Length = 475
Score = 366 bits (939), Expect = e-101
Identities = 190/280 (67%), Positives = 226/280 (80%), Gaps = 4/280 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
R PFL+SGT YK++MPHDLARAAL GL + + PK+ VD +I GTVIQEVKTSN+AREAA
Sbjct: 62 RTPFLLSGTSYKDLMPHDLARAALTGLLHRTSVPKEVVDYIIFGTVIQEVKTSNVAREAA 121
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LGAGFS+ TPAHTVTMACIS+N A+T +GL+A G DV +AGGVE +SD PIR SRK+R
Sbjct: 122 LGAGFSDKTPAHTVTMACISANQAMTTGVGLIASGQCDVIVAGGVELMSDIPIRHSRKMR 181
Query: 363 STMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
MLD KAK+ GQ+ SL S+ L+PE LPAVAEFSTSETMGHSADRLAAAF
Sbjct: 182 KLMLDLNKAKSMGQRLSLISKFRLNFLAPE-----LPAVAEFSTSETMGHSADRLAAAFA 236
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIETPITKDNGIRPSSKEKMATLKP 710
+SR EQD YA+RSH+LAK+A + GLL D+VP ++PG +T +TKDNGIRPSS E+MA LKP
Sbjct: 237 VSRLEQDEYALRSHSLAKKAQDEGLLSDVVPFRVPGKDT-VTKDNGIRPSSLEQMAKLKP 295
Query: 711 AFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
AFIKP+GT+TAAN+SFLTDGASA L+ EEKA MG+KPK
Sbjct: 296 AFIKPYGTVTAANSSFLTDGASAMLIMAEEKALAMGYKPK 335
Score = 63.9 bits (154), Expect = 6e-10
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +2
Query: 779 MFINY*RKSKTDGLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
M I K+ G + +AYLRDF+YVSQDPKDQLLLGP YATPK+L++
Sbjct: 319 MLIMAEEKALAMGYKPKAYLRDFMYVSQDPKDQLLLGPTYATPKVLEK 366
>sp|Q60587|ECHB_RAT Trifunctional enzyme beta subunit, mitochondrial precursor
(TP-beta) [Includes: 3-ketoacyl-CoA thiolase (Acetyl-CoA
acyltransferase) (Beta-ketothiolase)]
Length = 475
Score = 363 bits (932), Expect = e-100
Identities = 189/280 (67%), Positives = 225/280 (80%), Gaps = 4/280 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
RIPFL+SGT YK++MPHDLARAAL GL + N PK VD +I GTVIQEVKTSN+AREAA
Sbjct: 62 RIPFLLSGTSYKDLMPHDLARAALSGLLYRTNIPKDVVDYIIFGTVIQEVKTSNVAREAA 121
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LGAGFS+ TPAHTVTMACISSN A+T ++GL+A G DV +AGGVE +SD PIR SR +R
Sbjct: 122 LGAGFSDKTPAHTVTMACISSNQAMTTAVGLIASGQCDVVVAGGVELMSDVPIRHSRNMR 181
Query: 363 STMLDFRKAKTFGQKASLFSR----LLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
MLD KAKT Q+ SL ++ LSPE LPAVAEFST+ETMGHSADRLAAAF
Sbjct: 182 KMMLDLNKAKTLAQRLSLLTKFRLNFLSPE-----LPAVAEFSTNETMGHSADRLAAAFA 236
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIETPITKDNGIRPSSKEKMATLKP 710
+SR EQD YA+RSH+LAK+A + G L DIVP K+PG +T ++KDNGIRPSS E+MA LKP
Sbjct: 237 VSRMEQDKYALRSHSLAKKAQDEGHLSDIVPFKVPGKDT-VSKDNGIRPSSLEQMAKLKP 295
Query: 711 AFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
AFIKP+GT+TAAN+SFLTDGASA L+ +E++A MG+KPK
Sbjct: 296 AFIKPYGTVTAANSSFLTDGASAMLIMSEDRALAMGYKPK 335
Score = 64.3 bits (155), Expect = 5e-10
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +2
Query: 815 GLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
G + +AYLRDFIYVSQDPKDQLLLGP YATPK+L++
Sbjct: 331 GYKPKAYLRDFIYVSQDPKDQLLLGPTYATPKVLEK 366
>sp|P34255|YKA3_CAEEL Hypothetical protein B0303.3 in chromosome III
Length = 448
Score = 304 bits (778), Expect = 3e-82
Identities = 164/281 (58%), Positives = 202/281 (71%), Gaps = 5/281 (1%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
R PF+VSGT +K++M DL + A+ L +K P + +D++I GTVIQE KTSNIAREAA
Sbjct: 33 RTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVIQECKTSNIAREAA 92
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
L AG + PAHTVT+ACISSN+A+T MG+LA G + IAGGVE LSD PIR++R R
Sbjct: 93 LLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVELLSDVPIRYNRNAR 152
Query: 363 STMLDFRKAKTFGQK----ASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFG 530
ML KAK K + LLSPE LPAVAEFST ETMGHS DRLAAAF
Sbjct: 153 KAMLGMNKAKDVPSKLKIGGQIVKNLLSPE-----LPAVAEFSTGETMGHSGDRLAAAFN 207
Query: 531 ISREEQDLYAMRSHTLAKEAAENGLLDDIVPIKIPGIE-TPITKDNGIRPSSKEKMATLK 707
+SR EQD +A+RSHTLA EAA+NG D+VP+ + G + I +DNGIR S+ EK+++LK
Sbjct: 208 VSRREQDEFAIRSHTLASEAAKNGKFTDVVPVFLDGKKPKTIKEDNGIRVSTLEKLSSLK 267
Query: 708 PAFIKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKPK 830
PAF+KPHGT+TAANAS+LTDGASA L+ TEE A G+KPK
Sbjct: 268 PAFVKPHGTVTAANASYLTDGASAALIMTEEYALANGYKPK 308
Score = 58.2 bits (139), Expect = 3e-08
Identities = 24/37 (64%), Positives = 32/37 (86%)
Frame = +2
Query: 812 DGLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
+G + +AYLRD++YV+QDPKDQLLL PAY PK+LD+
Sbjct: 303 NGYKPKAYLRDYLYVAQDPKDQLLLSPAYVIPKLLDK 339
>sp|P76503|FADI_ECOLI 3-ketoacyl-CoA thiolase (Fatty acid oxidation complex beta subunit)
(Beta-ketothiolase) (Acetyl-CoA acyltransferase)
(Acyl-CoA ligase) (ACSs)
Length = 436
Score = 187 bits (475), Expect = 4e-47
Identities = 109/277 (39%), Positives = 162/277 (58%), Gaps = 2/277 (0%)
Frame = +3
Query: 3 RIPFLVSGTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAA 182
R PF T + + DL + + L + P + ++ ++ G V+Q + NIARE
Sbjct: 22 RTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIV 81
Query: 183 LGAGFSESTPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVR 362
LG G + T A++V+ AC +S A+ N L G I IAGG + S PI S+K+
Sbjct: 82 LGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLA 141
Query: 363 STMLDFRKAKTFGQKASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFGISRE 542
++D KA+T Q+ LFSRL + V PAVAE+ST MG +A+++A +GI+RE
Sbjct: 142 RVLVDVNKARTMSQRLKLFSRLRLRDLMPVP-PAVAEYSTGLRMGDTAEQMAKTYGITRE 200
Query: 543 EQDLYAMRSHTLAKEAAENG-LLDDIVPIKIPGIETPITKDNGIR-PSSKEKMATLKPAF 716
+QD A RSH A +A +G L ++++ IP + P+ +DN IR SS A L+PAF
Sbjct: 201 QQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAF 260
Query: 717 IKPHGTITAANASFLTDGASACLLTTEEKAKQMGWKP 827
+ HGT+TAAN++ LTDGA+A +L TE +AK++G P
Sbjct: 261 DRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVP 297
Score = 34.3 bits (77), Expect = 0.51
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 800 KSKTDGLETEAYLRDFIYVSQDPKDQLLLGPAYATPKILDR 922
++K GL YLR + + + D +LLGPA++TP L+R
Sbjct: 289 RAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALER 329
>sp|P44873|ATOB_HAEIN Acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase)
Length = 393
Score = 119 bits (298), Expect = 1e-26
Identities = 89/261 (34%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Frame = +3
Query: 54 DLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAALGAGFSESTPAHTVTMA 233
DL + K+ N V+ VI+G V+Q N AR+AAL AG + P+ T+
Sbjct: 28 DLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQNPARQAALKAGIEKEIPSLTINKV 87
Query: 234 CISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVRSTMLDFRKAKTFGQKAS 413
C S ++ + G D+ + GG+E +S AP KVR G K
Sbjct: 88 CGSGLKSVALGAQSIISGDADIVVVGGMENMSQAPYLLDSKVRQ-----------GVK-- 134
Query: 414 LFSRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFGISREEQDLYAMRSHTLAKEAA 593
L +T D A S MG +A+ +A +GISR+ QD A+RS TLA +A
Sbjct: 135 -MGNLTLRDTMIEDGLTCA--SNHYHMGITAENIAEQYGISRQAQDELALRSQTLASQAV 191
Query: 594 ENGLLD-DIVPIKIPGIETPITKDNGIRP---SSKEKMATLKPAFIKPHGTITAANASFL 761
+ G+ D +IVP+ + + I P ++ E +A LKPAF K GT+TA NAS +
Sbjct: 192 QLGVFDKEIVPVMVKTRKGDIIVSRDEYPKADTTAEGLAKLKPAF-KKEGTVTAGNASGI 250
Query: 762 TDGASACLLTTEEKAKQMGWK 824
DGA+A +L +E KA +G K
Sbjct: 251 NDGAAALILVSESKAHALGLK 271
>sp|P46707|THIL_MYCLE Probable acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase)
Length = 393
Score = 113 bits (282), Expect = 9e-25
Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Frame = +3
Query: 36 KNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAALGAGFSESTPA 215
K+ DL + KK N V VI+G V+ AR+AA+ AG PA
Sbjct: 22 KDFSASDLGAITIAAALKKANVAPSIVQYVIIGQVLTAGAGQMPARQAAVAAGIGWDVPA 81
Query: 216 HTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVRSTMLDFRKAKT 395
T+ C+S AI + L+ G DV +AGG E ++ AP ++D R
Sbjct: 82 LTINKMCLSGLDAIALADQLIRAGEFDVVVAGGQESMTKAP--------HLLMDSRSGYK 133
Query: 396 FGQKASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFGISREEQDLYAMRSHT 575
+G ++ L + + T++ MG ++ +R+EQD +A RSH
Sbjct: 134 YGD-VTIVDHLA--------YDGLHDVFTNQPMGALTEQRNDVEKFTRQEQDEFAARSHQ 184
Query: 576 LAKEAAENGLL-DDIVPIKIP---GIETPITKDNGIRP-SSKEKMATLKPAFIKPHGTIT 740
A A ++G+ D++VP+ IP G T+D GIR +S E +A LKPAF + GTIT
Sbjct: 185 KAAAAWKDGVFADEVVPVSIPQSKGDSLQFTEDEGIRANTSAESLAGLKPAF-RCGGTIT 243
Query: 741 AANASFLTDGASACLLTTEEKAKQMG 818
+AS ++DGA+ ++ +EKA+Q+G
Sbjct: 244 PGSASQISDGAATVVVMNKEKAQQLG 269
>sp|P45369|THIL_CHRVI Acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase)
Length = 394
Score = 112 bits (279), Expect = 2e-24
Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Frame = +3
Query: 24 GTDYKNVMPHDLARAALLGLHKKLNFPKQCVDNVILGTVIQEVKTSNIAREAALGAGFSE 203
G ++ ++ A L GL + + +D VILG V+ N AR+ L AG
Sbjct: 19 GGSLSSLSATEIGTAVLKGLLARTGLAPEQIDEVILGQVLTAGVGQNPARQTTLHAGLPH 78
Query: 204 STPAHTVTMACISSNIAITNSMGLLACGAIDVAIAGGVEFLSDAPIRFSRKVRSTMLDFR 383
S PA T+ C S A+ +M +ACG D+ IAGG E +S S V D +
Sbjct: 79 SVPAMTINKVCGSGLKAVHLAMQAIACGDADIVIAGGQESMSQ-----SSHVLPRSRDGQ 133
Query: 384 KAKTFGQKASLFSRLLSPETFSVDLPAVAEFSTSETMGHSADRLAAAFGISREEQDLYAM 563
+ + K +T VD + + + MG +A+ +A +G +RE+QD +A
Sbjct: 134 RMGDWSMK----------DTMIVD--GLWDAFNNYHMGTTAENIAQKYGFTREQQDAFAA 181
Query: 564 RSHTLAKEAAENG-LLDDIVPIKIP---GIETPITKDNGIR-PSSKEKMATLKPAFIKPH 728
S + A + G D+I+PI+IP G D R ++ E + L+PAF K
Sbjct: 182 ASQQKTEAAQKAGRFQDEIIPIEIPQRKGDPKVFDADEFPRHGTTAESLGKLRPAFSK-D 240
Query: 729 GTITAANASFLTDGASACLLTTEEKAKQMGWKP 827
G++TA NAS + DGA+ ++ E KAK++G KP
Sbjct: 241 GSVTAGNASGINDGAAMVVVMKESKAKELGLKP 273
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,468,725
Number of Sequences: 369166
Number of extensions: 2061416
Number of successful extensions: 5980
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5879
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9510757740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)