Planaria EST Database


DrC_00397

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00397
         (1043 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96EY1|DNJA3_HUMAN  DnaJ homolog subfamily A member 3, mi...   242   1e-63
sp|Q99M87|DNJA3_MOUSE  DnaJ homolog subfamily A member 3, mi...   240   4e-63
sp|Q24331|TID_DROVI  Tumorous imaginal discs protein, mitoch...   236   6e-62
sp|Q27237|TID_DROME  Tumorous imaginal discs protein, mitoch...   225   2e-58
sp|Q8TA83|DNJ10_CAEEL  DnaJ homolog dnj-10 (DnaJ domain prot...   179   2e-44
sp|O69269|DNAJ_BACSH  Chaperone protein dnaJ                      161   3e-39
sp|Q892R1|DNAJ_CLOTE  Chaperone protein dnaJ                      161   3e-39
sp|Q5KWZ8|DNAJ_GEOKA  Chaperone protein dnaJ                      160   6e-39
sp|P63969|DNAJ_NEIMB  Chaperone protein dnaJ >gi|54040948|sp...   159   2e-38
sp|Q5F5M1|DNAJ_NEIG1  Chaperone protein dnaJ                      157   4e-38
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial precursor
           (Tumorous imaginal discs protein Tid56 homolog) (DnaJ
           protein Tid-1) (hTid-1)
          Length = 480

 Score =  242 bits (617), Expect = 1e-63
 Identities = 116/252 (46%), Positives = 171/252 (67%), Gaps = 1/252 (0%)
 Frame = +3

Query: 75  ERAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVN 254
           ++ QE  + LTF QAA GVNKE  VN+M  C RC G  +EPGT    C  C GSG++++N
Sbjct: 206 DQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETIN 265

Query: 255 TGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVSLGAR 434
           TGPF+M            II +PC  C+G G+  Q+K++ + +PAG+EDGQ++R+ +G R
Sbjct: 266 TGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKR 325

Query: 435 SAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGSCS 614
              E+++T RV+KS +FRRDG+D+HSD+ +S+  A LGG     G+Y  + V IP G+ +
Sbjct: 326 ---EIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQGLYETINVTIPPGTQT 382

Query: 615 HDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLALAEQD-ESAGMINGVT 791
             +IR+ GKGI R+NSYGYGDHY++IKI+  KRLT  Q++L+L+ AE + +  G +NGVT
Sbjct: 383 DQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQSLILSYAEDETDVEGTVNGVT 442

Query: 792 MTANGKQAIDDT 827
           +T++G   +D +
Sbjct: 443 LTSSGGSTMDSS 454
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial precursor
           (Tumorous imaginal discs protein Tid56 homolog) (DnaJ
           protein Tid-1) (mTid-1)
          Length = 480

 Score =  240 bits (613), Expect = 4e-63
 Identities = 118/252 (46%), Positives = 168/252 (66%), Gaps = 1/252 (0%)
 Frame = +3

Query: 75  ERAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVN 254
           ++ QE  + LTF QAA GVNKE  VN+M  C RC G  +EPGT    C  C GSG++++N
Sbjct: 206 DQPQEYIMELTFNQAAKGVNKEFTVNIMDTCERCDGKGNEPGTKVQHCHYCGGSGMETIN 265

Query: 255 TGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVSLGAR 434
           TGPF+M            II NPC  C+G G+  Q+K++ + +PAG+EDGQ++R+ +G R
Sbjct: 266 TGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVTIPVPAGVEDGQTVRMPVGKR 325

Query: 435 SAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGSCS 614
              E++VT RV+KS +FRRDG+D+HSD+ +S+  A LGG     G+Y  + V IP G  +
Sbjct: 326 ---EIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGGTAKAQGLYETINVTIPAGIQT 382

Query: 615 HDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLALAEQD-ESAGMINGVT 791
             +IRL GKGI R+NSYGYGDHY++IKI+  KRL+  Q+ L+L+ AE + +  G +NGVT
Sbjct: 383 DQKIRLTGKGIPRINSYGYGDHYIHIKIRVPKRLSSRQQNLILSYAEDETDVEGTVNGVT 442

Query: 792 MTANGKQAIDDT 827
            T+ G + +D +
Sbjct: 443 HTSTGGRTMDSS 454
>sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitochondrial precursor
           (Lethal(2)tumorous imaginal discs protein) (TID58)
          Length = 529

 Score =  236 bits (603), Expect = 6e-62
 Identities = 115/246 (46%), Positives = 174/246 (70%), Gaps = 1/246 (0%)
 Frame = +3

Query: 78  RAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNT 257
           +AQE+ ++LTF QAA GVNK++ VN++ +C +C GSK EPGT    C  C G+G ++++T
Sbjct: 214 QAQELVMDLTFAQAARGVNKDVNVNVVDQCPKCAGSKCEPGTKPGRCQYCNGTGFETIST 273

Query: 258 GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVSLGARS 437
           GPF+M             IK PC +C+GKG+  QR+K+ V +PAGIE+GQ++R+ +G++ 
Sbjct: 274 GPFVMRSTCRYCQGTRQYIKYPCAECEGKGQTVQRRKVTVPVPAGIENGQTVRMQVGSK- 332

Query: 438 AQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGSCSH 617
             EL+VT RVE+S+ FRRDG+DVH+D  +SL  A LGG + V G+Y D  ++I  G+ SH
Sbjct: 333 --ELFVTFRVERSDYFRRDGADVHTDAPISLAQAVLGGTVRVQGVYEDQWLNIEPGTSSH 390

Query: 618 DRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLALAE-QDESAGMINGVTM 794
            +I L GKG+ RVN++G+GDHY++IKI+  K+L++ QRALL A AE ++++ G I+G+  
Sbjct: 391 RKIALRGKGLKRVNAHGHGDHYVHIKIEVPKKLSQEQRALLEAYAELEEDTPGQIHGMAQ 450

Query: 795 TANGKQ 812
             +G +
Sbjct: 451 RKDGSK 456
>sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitochondrial precursor
           (Lethal(2)tumorous imaginal discs protein) (TID56)
           (TID50)
          Length = 520

 Score =  225 bits (573), Expect = 2e-58
 Identities = 113/250 (45%), Positives = 173/250 (69%), Gaps = 4/250 (1%)
 Frame = +3

Query: 78  RAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNT 257
           +AQE+ ++LTF QAA GVNK++ VN++ +C +C G+K EPGT    C  C G+G ++V+T
Sbjct: 198 QAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVST 257

Query: 258 GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVSLGARS 437
           GPF+M             IK PC +C+GKGR  QR+K+ V +PAGIE+GQ++R+ +G++ 
Sbjct: 258 GPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQVGSK- 316

Query: 438 AQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGSCSH 617
             EL+VT RVE+S+ FRR+G+DVH+D  +SL  A LGG + V G+Y D  +++  G+ SH
Sbjct: 317 --ELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSH 374

Query: 618 DRIRLPGKGIARVNSYGYGDHYLNIKI--QPTKRLTETQRALLLALAE-QDESAGMINGV 788
            +I L GKG+ RVN++G+GDHY+++KI     K+L + + AL+ A AE ++++ G I+G+
Sbjct: 375 HKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGI 434

Query: 789 TMTANG-KQA 815
               +G KQA
Sbjct: 435 ANRKDGSKQA 444
>sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 (DnaJ domain protein 10)
          Length = 456

 Score =  179 bits (453), Expect = 2e-44
 Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 3/297 (1%)
 Frame = +3

Query: 69   GPERAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQS 248
            G   AQE+ ++++F +A  G  K + VN++ +C +C G++ EPG   T CP C G+G  S
Sbjct: 159  GHSAAQEMVMDISFEEAVRGATKNVSVNVVEDCLKCHGTQVEPGHKKTSCPYCNGTGAVS 218

Query: 249  VNT-GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVSL 425
                G F                KNPC +C+G+G+  QR+++  ++PAG  +G SL+  +
Sbjct: 219  QRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEGQTVQRRQVSFNVPAGTNNGDSLKFQV 278

Query: 426  GARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKG 605
            G     +L+V   V  S  FRR+  D+H D+ +SL  A LGG + VPGI GD  V IP G
Sbjct: 279  GKN---QLFVRFNVAPSLKFRREKDDIHCDVDISLAQAVLGGTVKVPGINGDTYVHIPAG 335

Query: 606  SCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLALAEQDE-SAGMIN 782
            + SH ++RL GKG+ R++SYG GD Y++IK+   K LT  Q+ ++LA A  ++   G I 
Sbjct: 336  TGSHTKMRLTGKGVKRLHSYGNGDQYMHIKVTVPKYLTAEQKQIMLAWAATEQLKDGTIK 395

Query: 783  GVTMTANGKQAIDDTDQFLLSQ-IRMVLKQHENTDANQPTNKQDQQQHENPSEKLKK 950
            G+      ++     ++   S+      K+     A       + Q++E   EK+K+
Sbjct: 396  GLEKNQKTEEKETKKNEEKKSEGASESQKRRSEPVAENAETIDENQENEGFFEKIKR 452
>sp|O69269|DNAJ_BACSH Chaperone protein dnaJ
          Length = 368

 Score =  161 bits (408), Expect = 3e-39
 Identities = 87/233 (37%), Positives = 133/233 (57%), Gaps = 10/233 (4%)
 Frame = +3

Query: 87  EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGV--QSVNT- 257
           +  +N+ F +A  G   E+ +     C  C GS ++PGT    C +C G+G   Q+V+T 
Sbjct: 112 QYRMNIKFEEAIFGKETEIEIPKDETCETCHGSGAKPGTQPETCSTCNGAGQINQAVDTP 171

Query: 258 -GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVS---- 422
            G  +             IIK  C  C+G+G+V +RKKI+VSIPAG++DGQ +RVS    
Sbjct: 172 FGRMMNRRSCTTCHGTGKIIKEKCSTCRGEGKVQKRKKIKVSIPAGVDDGQQIRVSGQGE 231

Query: 423 --LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDI 596
             +    A +LY+  RV+  N F RDG D++ ++ ++ P AALG +I VP ++G V + I
Sbjct: 232 PGINGGPAGDLYIMFRVQGHNDFERDGDDIYFELKLTFPQAALGDEIEVPTVHGKVKLRI 291

Query: 597 PKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLALAE 755
           P G+ S  + RL  KG+  V+ YG G+ Y+ +K+   ++LTE Q+ LL   AE
Sbjct: 292 PAGTQSGAQFRLKDKGVKNVHGYGMGNQYVTVKVMTPEKLTEKQKQLLREFAE 344
>sp|Q892R1|DNAJ_CLOTE Chaperone protein dnaJ
          Length = 375

 Score =  161 bits (407), Expect = 3e-39
 Identities = 92/244 (37%), Positives = 133/244 (54%), Gaps = 12/244 (4%)
 Frame = +3

Query: 60  RDDGPERAQEV--NVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQG 233
           R +GP++  +V  ++NLTF +A  GV KE+ +     C  C G+ ++PGT+S  CP C G
Sbjct: 110 RRNGPQKGPDVQYSINLTFNEAVFGVEKEVSITKSETCETCTGTGAKPGTNSKTCPKCNG 169

Query: 234 SGVQSV--NT--GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIED 401
           SG   V  NT  G F+             II +PC DCKGKG V ++KKI+V+IPAG++ 
Sbjct: 170 SGQIKVQRNTALGSFVSVNTCDMCGGKGTIISDPCSDCKGKGTVRKQKKIKVNIPAGVDT 229

Query: 402 GQSLRV------SLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITV 563
           G  + +       +      +LY++VRV     F+R G D++ D  +S   A+LG ++ V
Sbjct: 230 GNVIPIRGQGEAGVNGGPPGDLYISVRVMPDPFFKRRGDDIYIDQHISFAKASLGTELKV 289

Query: 564 PGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLL 743
             I G+V  DIP G+      RL GKG+  VN  G GD Y+NI +   K L + Q+  L 
Sbjct: 290 KTIDGEVKYDIPSGTQPGTVFRLKGKGVPHVNGRGRGDQYVNIIVDIPKSLNQKQKEALF 349

Query: 744 ALAE 755
           A  E
Sbjct: 350 AYME 353
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein dnaJ
          Length = 382

 Score =  160 bits (405), Expect = 6e-39
 Identities = 92/239 (38%), Positives = 128/239 (53%), Gaps = 12/239 (5%)
 Frame = +3

Query: 60  RDDGPERAQEVN--VNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQG 233
           R  GP +  +V   + LTF +AA G   E+ +     C  C GS ++PGTS T CP C G
Sbjct: 113 RASGPRKGADVEYMMTLTFEEAAFGKETEIEIpreETCDTCQGSGAKPGTSPTSCPHCHG 172

Query: 234 SG-VQSVNTGPF---LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIED 401
           SG V S    PF   +              I   C  C G GRV +RKKI V IPAG++D
Sbjct: 173 SGQVTSEQATPFGRIVNRRTCPVCGGTGRYIPEKCPTCGGTGRVKRRKKIHVKIPAGVDD 232

Query: 402 GQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITV 563
           GQ LRV+      +      +LY+  RVE    F+RDG D++ ++ +S   AALG +I V
Sbjct: 233 GQQLRVAGQGEPGVNGGPPGDLYIIFRVEPHEFFKRDGDDIYCEVPLSFAQAALGDEIEV 292

Query: 564 PGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALL 740
           P ++G V + IP G+ +  R RL GKG+  V  YG GD ++ +++    +LTE Q+ LL
Sbjct: 293 PTLHGHVKLKIPAGTQTGTRFRLKGKGVPNVRGYGQGDQHVIVRVVTPTKLTEKQKQLL 351
>sp|P63969|DNAJ_NEIMB Chaperone protein dnaJ
 sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
          Length = 373

 Score =  159 bits (401), Expect = 2e-38
 Identities = 83/224 (37%), Positives = 125/224 (55%), Gaps = 6/224 (2%)
 Frame = +3

Query: 87  EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNTGPF 266
           +V + +T  +AA GV K + +     C  C GS ++PGTS   CP+C+GSG   +    F
Sbjct: 121 QVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQAIF 180

Query: 267 LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVS------LG 428
            M             IK PC  C+G GR    K + V+IPAGI+DGQ +R+S      + 
Sbjct: 181 RMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDGQRIRLSGEGGPGMH 240

Query: 429 ARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGS 608
              A +LYVTVR+    +F+RDG D+H ++ +S   AALGG++ VP + G V + +PK +
Sbjct: 241 GAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFATAALGGELEVPTLDGKVKLTVPKET 300

Query: 609 CSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALL 740
            +  R+R+ GKG+  + S   GD Y +I ++    LT+ Q+ LL
Sbjct: 301 QTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELL 344
>sp|Q5F5M1|DNAJ_NEIG1 Chaperone protein dnaJ
          Length = 373

 Score =  157 bits (398), Expect = 4e-38
 Identities = 82/224 (36%), Positives = 125/224 (55%), Gaps = 6/224 (2%)
 Frame = +3

Query: 87  EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNTGPF 266
           +V + +T  +AA GV K + +     C  C GS ++PG S   CP+C+GSG   +    F
Sbjct: 121 QVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGASPETCPTCKGSGTVHIQQAIF 180

Query: 267 LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGIEDGQSLRVS------LG 428
            M             IK PC  C+G GR    K + V+IPAGI+DGQ +R+S      + 
Sbjct: 181 RMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVNIPAGIDDGQRIRLSGEGGPGMH 240

Query: 429 ARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIYGDVTVDIPKGS 608
              A +LYVTVR+    +F+RDG D+H ++ +S  +AALGG++ VP + G V + +PK +
Sbjct: 241 GAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAMAALGGELEVPTLDGKVKLTVPKET 300

Query: 609 CSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALL 740
            +  R+R+ GKG+  + S   GD Y +I ++    LT+ Q+ LL
Sbjct: 301 QTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDRQKELL 344
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,251,550
Number of Sequences: 369166
Number of extensions: 2447494
Number of successful extensions: 7790
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6901
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 11292457220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00397

  1. Dr_sW_010_K17
  2. Dr_sW_025_E16
  3. Dr_sW_009_N22
  4. Dr_sW_012_N21
  5. Dr_sW_011_A17
  6. Dr_sW_028_H22