Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_025_E16
(630 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mi... 181 1e-45
sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mi... 181 1e-45
sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitoch... 181 2e-45
sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitoch... 171 1e-42
sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 (DnaJ domain prot... 147 2e-35
sp|O69269|DNAJ_BACSH Chaperone protein dnaJ 139 8e-33
sp|P63969|DNAJ_NEIMB Chaperone protein dnaJ >gi|54040948|sp... 134 3e-31
sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein dnaJ 133 4e-31
sp|Q5F5M1|DNAJ_NEIG1 Chaperone protein dnaJ 132 6e-31
sp|Q8XIT1|DNAJ_CLOPE Chaperone protein dnaJ 130 4e-30
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (mTid-1)
Length = 480
Score = 181 bits (460), Expect = 1e-45
Identities = 84/178 (47%), Positives = 123/178 (69%)
Frame = +3
Query: 18 CPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGI 197
C C GSG++++NTGPF+M II NPC C+G G+ Q+K++ + +PAG+
Sbjct: 253 CHYCGGSGMETINTGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVTIPVPAGV 312
Query: 198 EDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIY 377
EDGQ++R+ +G R E++VT RV+KS +FRRDG+D+HSD+ +S+ A LGG G+Y
Sbjct: 313 EDGQTVRMPVGKR---EIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGGTAKAQGLY 369
Query: 378 GDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTDTQRALLLAW 551
+ V IP G + +IRL GKGI R+NSYGYGDHY++IKI+ KRL+ Q+ L+L++
Sbjct: 370 ETINVTIPAGIQTDQKIRLTGKGIPRINSYGYGDHYIHIKIRVPKRLSSRQQNLILSY 427
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (hTid-1)
Length = 480
Score = 181 bits (459), Expect = 1e-45
Identities = 82/178 (46%), Positives = 125/178 (70%)
Frame = +3
Query: 18 CPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGI 197
C C GSG++++NTGPF+M II +PC C+G G+ Q+K++ + +PAG+
Sbjct: 253 CHYCGGSGMETINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGV 312
Query: 198 EDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIY 377
EDGQ++R+ +G R E+++T RV+KS +FRRDG+D+HSD+ +S+ A LGG G+Y
Sbjct: 313 EDGQTVRMPVGKR---EIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQGLY 369
Query: 378 GDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTDTQRALLLAW 551
+ V IP G+ + +IR+ GKGI R+NSYGYGDHY++IKI+ KRLT Q++L+L++
Sbjct: 370 ETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQSLILSY 427
>sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID58)
Length = 529
Score = 181 bits (458), Expect = 2e-45
Identities = 86/178 (48%), Positives = 126/178 (70%)
Frame = +3
Query: 18 CPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGI 197
C C G+G ++++TGPF+M IK PC +C+GKG+ QR+K+ V +PAGI
Sbjct: 260 CQYCNGTGFETISTGPFVMRSTCRYCQGTRQYIKYPCAECEGKGQTVQRRKVTVPVPAGI 319
Query: 198 EDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIY 377
E+GQ++R+ +G++ EL+VT RVE+S+ FRRDG+DVH+D +SL A LGG + V G+Y
Sbjct: 320 ENGQTVRMQVGSK---ELFVTFRVERSDYFRRDGADVHTDAPISLAQAVLGGTVRVQGVY 376
Query: 378 GDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTDTQRALLLAW 551
D ++I G+ SH +I L GKG+ RVN++G+GDHYV+IKI+ K+L+ QRALL A+
Sbjct: 377 EDQWLNIEPGTSSHRKIALRGKGLKRVNAHGHGDHYVHIKIEVPKKLSQEQRALLEAY 434
>sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID56)
(TID50)
Length = 520
Score = 171 bits (433), Expect = 1e-42
Identities = 81/177 (45%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
Frame = +3
Query: 18 CPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPAGI 197
C C G+G ++V+TGPF+M IK PC +C+GKGR QR+K+ V +PAGI
Sbjct: 244 CQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGI 303
Query: 198 EDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPGIY 377
E+GQ++R+ +G++ EL+VT RVE+S+ FRR+G+DVH+D +SL A LGG + V G+Y
Sbjct: 304 ENGQTVRMQVGSK---ELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVY 360
Query: 378 GDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQ-PTKRLTDTQRALLL 545
D +++ G+ SH +I L GKG+ RVN++G+GDHYV++KI P+ + D +R L+
Sbjct: 361 EDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALI 417
>sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 (DnaJ domain protein 10)
Length = 456
Score = 147 bits (372), Expect = 2e-35
Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 1/188 (0%)
Frame = +3
Query: 12 TVCPSCQGSGVQSVNT-GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIP 188
T CP C G+G S G F KNPC +C+G+G+ QR+++ ++P
Sbjct: 206 TSCPYCNGTGAVSQRLQGGFFYQTTCNRCRGSGHYNKNPCQECEGEGQTVQRRQVSFNVP 265
Query: 189 AGIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVP 368
AG +G SL+ +G +L+V V S FRR+ D+H D+ +SL A LGG + VP
Sbjct: 266 AGTNNGDSLKFQVGKN---QLFVRFNVAPSLKFRREKDDIHCDVDISLAQAVLGGTVKVP 322
Query: 369 GIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTDTQRALLLA 548
GI GD V IP G+ SH ++RL GKG+ R++SYG GD Y++IK+ K LT Q+ ++LA
Sbjct: 323 GINGDTYVHIPAGTGSHTKMRLTGKGVKRLHSYGNGDQYMHIKVTVPKYLTAEQKQIMLA 382
Query: 549 WLSRTSLQ 572
W + L+
Sbjct: 383 WAATEQLK 390
>sp|O69269|DNAJ_BACSH Chaperone protein dnaJ
Length = 368
Score = 139 bits (349), Expect = 8e-33
Identities = 74/190 (38%), Positives = 112/190 (58%), Gaps = 10/190 (5%)
Frame = +3
Query: 3 TSSTVCPSCQGSGV--QSVNT--GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKK 170
T C +C G+G Q+V+T G + IIK C C+G+G+V +RKK
Sbjct: 150 TQPETCSTCNGAGQINQAVDTPFGRMMNRRSCTTCHGTGKIIKEKCSTCRGEGKVQKRKK 209
Query: 171 IRVSIPAGIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSL 332
I+VSIPAG++DGQ +RVS + A +LY+ RV+ N F RDG D++ ++ ++
Sbjct: 210 IKVSIPAGVDDGQQIRVSGQGEPGINGGPAGDLYIMFRVQGHNDFERDGDDIYFELKLTF 269
Query: 333 PLAALGGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTK 512
P AALG +I VP ++G V + IP G+ S + RL KG+ V+ YG G+ YV +K+ +
Sbjct: 270 PQAALGDEIEVPTVHGKVKLRIPAGTQSGAQFRLKDKGVKNVHGYGMGNQYVTVKVMTPE 329
Query: 513 RLTDTQRALL 542
+LT+ Q+ LL
Sbjct: 330 KLTEKQKQLL 339
>sp|P63969|DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
Length = 373
Score = 134 bits (336), Expect = 3e-31
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Frame = +3
Query: 3 TSSTVCPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVS 182
TS CP+C+GSG + F M IK PC C+G GR K + V+
Sbjct: 159 TSPETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN 218
Query: 183 IPAGIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAA 344
IPAGI+DGQ +R+S + A +LYVTVR+ +F+RDG D+H ++ +S AA
Sbjct: 219 IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFATAA 278
Query: 345 LGGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTD 524
LGG++ VP + G V + +PK + + R+R+ GKG+ + S GD Y +I ++ LTD
Sbjct: 279 LGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTD 338
Query: 525 TQRALL 542
Q+ LL
Sbjct: 339 RQKELL 344
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein dnaJ
Length = 382
Score = 133 bits (334), Expect = 4e-31
Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 10/190 (5%)
Frame = +3
Query: 3 TSSTVCPSCQGSG-VQSVNTGPF---LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKK 170
TS T CP C GSG V S PF + I C C G GRV +RKK
Sbjct: 162 TSPTSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTGRYIPEKCPTCGGTGRVKRRKK 221
Query: 171 IRVSIPAGIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSL 332
I V IPAG++DGQ LRV+ + +LY+ RVE F+RDG D++ ++ +S
Sbjct: 222 IHVKIPAGVDDGQQLRVAGQGEPGVNGGPPGDLYIIFRVEPHEFFKRDGDDIYCEVPLSF 281
Query: 333 PLAALGGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTK 512
AALG +I VP ++G V + IP G+ + R RL GKG+ V YG GD +V +++
Sbjct: 282 AQAALGDEIEVPTLHGHVKLKIPAGTQTGTRFRLKGKGVPNVRGYGQGDQHVIVRVVTPT 341
Query: 513 RLTDTQRALL 542
+LT+ Q+ LL
Sbjct: 342 KLTEKQKQLL 351
>sp|Q5F5M1|DNAJ_NEIG1 Chaperone protein dnaJ
Length = 373
Score = 132 bits (333), Expect = 6e-31
Identities = 70/185 (37%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Frame = +3
Query: 6 SSTVCPSCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSI 185
S CP+C+GSG + F M IK PC C+G GR K + V+I
Sbjct: 160 SPETCPTCKGSGTVHIQQAIFRMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVNI 219
Query: 186 PAGIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAAL 347
PAGI+DGQ +R+S + A +LYVTVR+ +F+RDG D+H ++ +S +AAL
Sbjct: 220 PAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAMAAL 279
Query: 348 GGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTKRLTDT 527
GG++ VP + G V + +PK + + R+R+ GKG+ + S GD Y +I ++ LTD
Sbjct: 280 GGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPVNLTDR 339
Query: 528 QRALL 542
Q+ LL
Sbjct: 340 QKELL 344
>sp|Q8XIT1|DNAJ_CLOPE Chaperone protein dnaJ
Length = 387
Score = 130 bits (326), Expect = 4e-30
Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 10/194 (5%)
Frame = +3
Query: 3 TSSTVCPSCQGSGVQSVNT----GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKK 170
TS CP C GSG V G F+ +I++PC DCKGKG V + +K
Sbjct: 169 TSPKTCPKCNGSGQIRVQRQTPLGSFVSTTTCDQCGGTGKVIEDPCPDCKGKGTVRKNRK 228
Query: 171 IRVSIPAGIEDGQSLRV----SLGARS--AQELYVTVRVEKSNLFRRDGSDVHSDITVSL 332
I V IPAG++ G + + GA + A +LY+ V V S +FRR+GSD++ D +S+
Sbjct: 229 ITVKIPAGVDTGNIIPLRGQGEQGANNGPAGDLYIRVNVAPSKIFRREGSDIYYDYKISM 288
Query: 333 PLAALGGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYVNIKIQPTK 512
AALG +ITVP + G+V +P G+ + RL GKG+ VN G G+ YV++ ++ K
Sbjct: 289 AKAALGAEITVPTVDGNVKYKVPAGTQPGTKFRLKGKGVPHVNGGGRGNQYVHMVVEVPK 348
Query: 513 RLTDTQRALLLAWL 554
L Q L A++
Sbjct: 349 HLNKEQEEALKAFM 362
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,505,319
Number of Sequences: 369166
Number of extensions: 1583390
Number of successful extensions: 4776
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4097
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5023626210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)