Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_012_N21
(673 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mi... 148 1e-35
sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mi... 144 2e-34
sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitoch... 137 3e-32
sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitoch... 125 1e-28
sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 (DnaJ domain prot... 108 2e-23
sp|O69269|DNAJ_BACSH Chaperone protein dnaJ 100 4e-21
sp|Q835R5|DNAJ_ENTFA Chaperone protein dnaJ 96 1e-19
sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein dnaJ 94 2e-19
sp|Q9KWS6|DNAJ_BACTR Chaperone protein dnaJ 94 3e-19
sp|Q65H55|DNAJ_BACLD Chaperone protein dnaJ 93 5e-19
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (hTid-1)
Length = 480
Score = 148 bits (373), Expect = 1e-35
Identities = 70/147 (47%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPG 201
G+EDGQ++R+ +G R E+++T RV+KS +FRRDG+D+HSD+ +S+ A LGG G
Sbjct: 311 GVEDGQTVRMPVGKR---EIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGGTARAQG 367
Query: 202 IYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLAL 381
+Y + V IP G+ + +IR+ GKGI R+NSYGYGDHY++IKI+ KRLT Q++L+L+
Sbjct: 368 LYETINVTIPPGTQTDQKIRMGGKGIPRINSYGYGDHYIHIKIRVPKRLTSRQQSLILSY 427
Query: 382 AEQD-ESAGMINGVTMTANGKQAIDDT 459
AE + + G +NGVT+T++G +D +
Sbjct: 428 AEDETDVEGTVNGVTLTSSGGSTMDSS 454
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (mTid-1)
Length = 480
Score = 144 bits (363), Expect = 2e-34
Identities = 71/147 (48%), Positives = 104/147 (70%), Gaps = 1/147 (0%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPG 201
G+EDGQ++R+ +G R E++VT RV+KS +FRRDG+D+HSD+ +S+ A LGG G
Sbjct: 311 GVEDGQTVRMPVGKR---EIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGGTAKAQG 367
Query: 202 IYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLAL 381
+Y + V IP G + +IRL GKGI R+NSYGYGDHY++IKI+ KRL+ Q+ L+L+
Sbjct: 368 LYETINVTIPAGIQTDQKIRLTGKGIPRINSYGYGDHYIHIKIRVPKRLSSRQQNLILSY 427
Query: 382 AEQD-ESAGMINGVTMTANGKQAIDDT 459
AE + + G +NGVT T+ G + +D +
Sbjct: 428 AEDETDVEGTVNGVTHTSTGGRTMDSS 454
>sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID58)
Length = 529
Score = 137 bits (345), Expect = 3e-32
Identities = 68/142 (47%), Positives = 105/142 (73%), Gaps = 1/142 (0%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPG 201
GIE+GQ++R+ +G++ EL+VT RVE+S+ FRRDG+DVH+D +SL A LGG + V G
Sbjct: 318 GIENGQTVRMQVGSK---ELFVTFRVERSDYFRRDGADVHTDAPISLAQAVLGGTVRVQG 374
Query: 202 IYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLAL 381
+Y D ++I G+ SH +I L GKG+ RVN++G+GDHY++IKI+ K+L++ QRALL A
Sbjct: 375 VYEDQWLNIEPGTSSHRKIALRGKGLKRVNAHGHGDHYVHIKIEVPKKLSQEQRALLEAY 434
Query: 382 AE-QDESAGMINGVTMTANGKQ 444
AE ++++ G I+G+ +G +
Sbjct: 435 AELEEDTPGQIHGMAQRKDGSK 456
>sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID56)
(TID50)
Length = 520
Score = 125 bits (314), Expect = 1e-28
Identities = 65/146 (44%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPG 201
GIE+GQ++R+ +G++ EL+VT RVE+S+ FRR+G+DVH+D +SL A LGG + V G
Sbjct: 302 GIENGQTVRMQVGSK---ELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQG 358
Query: 202 IYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKI--QPTKRLTETQRALLL 375
+Y D +++ G+ SH +I L GKG+ RVN++G+GDHY+++KI K+L + + AL+
Sbjct: 359 VYEDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIE 418
Query: 376 ALAE-QDESAGMINGVTMTANG-KQA 447
A AE ++++ G I+G+ +G KQA
Sbjct: 419 AYAELEEDTPGQIHGIANRKDGSKQA 444
>sp|Q8TA83|DNJ10_CAEEL DnaJ homolog dnj-10 (DnaJ domain protein 10)
Length = 456
Score = 108 bits (269), Expect = 2e-23
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGGKITVPG 201
G +G SL+ +G +L+V V S FRR+ D+H D+ +SL A LGG + VPG
Sbjct: 267 GTNNGDSLKFQVGKN---QLFVRFNVAPSLKFRREKDDIHCDVDISLAQAVLGGTVKVPG 323
Query: 202 IYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQRALLLAL 381
I GD V IP G+ SH ++RL GKG+ R++SYG GD Y++IK+ K LT Q+ ++LA
Sbjct: 324 INGDTYVHIPAGTGSHTKMRLTGKGVKRLHSYGNGDQYMHIKVTVPKYLTAEQKQIMLAW 383
Query: 382 AEQDE-SAGMINGVTMTANGKQAIDDTDQFLLSQ-IRMVLKQHENTDANQPTNKQDQQQH 555
A ++ G I G+ ++ ++ S+ K+ A + Q++
Sbjct: 384 AATEQLKDGTIKGLEKNQKTEEKETKKNEEKKSEGASESQKRRSEPVAENAETIDENQEN 443
Query: 556 ENPSEKLKK 582
E EK+K+
Sbjct: 444 EGFFEKIKR 452
>sp|O69269|DNAJ_BACSH Chaperone protein dnaJ
Length = 368
Score = 100 bits (248), Expect = 4e-21
Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Frame = +1
Query: 10 SARGGIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLA 171
S G++DGQ +RVS + A +LY+ RV+ N F RDG D++ ++ ++ P A
Sbjct: 213 SIPAGVDDGQQIRVSGQGEPGINGGPAGDLYIMFRVQGHNDFERDGDDIYFELKLTFPQA 272
Query: 172 ALGGKITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLT 351
ALG +I VP ++G V + IP G+ S + RL KG+ V+ YG G+ Y+ +K+ ++LT
Sbjct: 273 ALGDEIEVPTVHGKVKLRIPAGTQSGAQFRLKDKGVKNVHGYGMGNQYVTVKVMTPEKLT 332
Query: 352 ETQRALLLALAE 387
E Q+ LL AE
Sbjct: 333 EKQKQLLREFAE 344
>sp|Q835R5|DNAJ_ENTFA Chaperone protein dnaJ
Length = 389
Score = 95.5 bits (236), Expect = 1e-19
Identities = 50/128 (39%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Frame = +1
Query: 22 GIEDGQSLRVSLGARSAQ------ELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGG 183
G+EDGQ +R++ + +LYV RVE S++F RDG++++ D+ VS AALG
Sbjct: 234 GVEDGQQMRLANQGEAGTNGGPYGDLYVVFRVEDSDIFDRDGAEIYYDLPVSFVQAALGD 293
Query: 184 KITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQR 363
++TVP ++GDV + IP G+ + RL GKG R+ G GD ++ +K+ K L E Q+
Sbjct: 294 EVTVPTVHGDVKLKIPAGTQTGTNFRLRGKGAPRLRGGGNGDQHVKVKLITPKNLNEEQK 353
Query: 364 ALLLALAE 387
L A A+
Sbjct: 354 DALRAFAK 361
>sp|Q5KWZ8|DNAJ_GEOKA Chaperone protein dnaJ
Length = 382
Score = 94.4 bits (233), Expect = 2e-19
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Frame = +1
Query: 22 GIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGG 183
G++DGQ LRV+ + +LY+ RVE F+RDG D++ ++ +S AALG
Sbjct: 229 GVDDGQQLRVAGQGEPGVNGGPPGDLYIIFRVEPHEFFKRDGDDIYCEVPLSFAQAALGD 288
Query: 184 KITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQR 363
+I VP ++G V + IP G+ + R RL GKG+ V YG GD ++ +++ +LTE Q+
Sbjct: 289 EIEVPTLHGHVKLKIPAGTQTGTRFRLKGKGVPNVRGYGQGDQHVIVRVVTPTKLTEKQK 348
Query: 364 ALL 372
LL
Sbjct: 349 QLL 351
>sp|Q9KWS6|DNAJ_BACTR Chaperone protein dnaJ
Length = 380
Score = 94.0 bits (232), Expect = 3e-19
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Frame = +1
Query: 22 GIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGG 183
GI+DGQ LRV+ + +LY+ VE F RDG D++ +I ++ AALG
Sbjct: 227 GIDDGQQLRVAGQGEPGINGGPPGDLYIVFHVEPHEFFERDGDDIYCEIPLTFAQAALGD 286
Query: 184 KITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQR 363
+I VP ++G V + IP G+ + + RL GKG+ V YGYGD ++ +++ +LTE Q+
Sbjct: 287 EIEVPTLHGKVRLKIPAGTQTGTKFRLKGKGVPNVRGYGYGDQHVIVRVVTPTKLTEKQK 346
Query: 364 ALL 372
LL
Sbjct: 347 QLL 349
>sp|Q65H55|DNAJ_BACLD Chaperone protein dnaJ
Length = 375
Score = 93.2 bits (230), Expect = 5e-19
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Frame = +1
Query: 22 GIEDGQSLRVS------LGARSAQELYVTVRVEKSNLFRRDGSDVHSDITVSLPLAALGG 183
G++DGQ LRV+ + + +L+V RV++ F RDG D++ ++ ++ AALG
Sbjct: 224 GVDDGQQLRVAGQGEPGINGGPSGDLFVVFRVQEHEFFERDGDDIYCEMPLTFAQAALGD 283
Query: 184 KITVPGIYGDVTVDIPKGSCSHDRIRLPGKGIARVNSYGYGDHYLNIKIQPTKRLTETQR 363
+I VP ++G V + +P G+ + + RL GKG+A V YG GD ++ +++ LTE Q+
Sbjct: 284 EIEVPTLHGKVKLKVPAGTQTGTKFRLKGKGVANVRGYGQGDQHIVVRVVTPTNLTENQK 343
Query: 364 ALLLALAE 387
+L AE
Sbjct: 344 NILREFAE 351
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,882,554
Number of Sequences: 369166
Number of extensions: 1434595
Number of successful extensions: 4673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4595
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5636246860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)