Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_K17
(564 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitoch... 148 8e-36
sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitoch... 147 1e-35
sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mi... 144 2e-34
sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mi... 141 1e-33
sp|P63969|DNAJ_NEIMB Chaperone protein dnaJ >gi|54040948|sp... 110 3e-24
sp|Q5E3A8|DNAJ_VIBF1 Chaperone protein dnaJ 110 3e-24
sp|Q73T77|DNAJ2_MYCPA Chaperone protein dnaJ 2 108 7e-24
sp|Q5F5M1|DNAJ_NEIG1 Chaperone protein dnaJ 108 7e-24
sp|P0A548|DNAJ1_MYCTU Chaperone protein dnaJ 1 >gi|61222854... 106 5e-23
sp|Q892R1|DNAJ_CLOTE Chaperone protein dnaJ 105 1e-22
>sp|Q24331|TID_DROVI Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID58)
Length = 529
Score = 148 bits (374), Expect = 8e-36
Identities = 73/162 (45%), Positives = 108/162 (66%)
Frame = +3
Query: 78 RAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNT 257
+AQE+ ++LTF QAA GVNK++ VN++ +C +C GSK EPGT C C G+G ++++T
Sbjct: 214 QAQELVMDLTFAQAARGVNKDVNVNVVDQCPKCAGSKCEPGTKPGRCQYCNGTGFETIST 273
Query: 258 GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVSLRARS 437
GPF+M IK PC +C+GKG+ QR+K+ V +P I++GQT+R+ +
Sbjct: 274 GPFVMRSTCRYCQGTRQYIKYPCAECEGKGQTVQRRKVTVPVPAGIENGQTVRMQV---G 330
Query: 438 AQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
++EL+VT RVE+S+ FRRD +DVH+D ISL L G + V
Sbjct: 331 SKELFVTFRVERSDYFRRDGADVHTDAPISLAQAVLGGTVRV 372
>sp|Q27237|TID_DROME Tumorous imaginal discs protein, mitochondrial precursor
(Lethal(2)tumorous imaginal discs protein) (TID56)
(TID50)
Length = 520
Score = 147 bits (372), Expect = 1e-35
Identities = 73/162 (45%), Positives = 108/162 (66%)
Frame = +3
Query: 78 RAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNT 257
+AQE+ ++LTF QAA GVNK++ VN++ +C +C G+K EPGT C C G+G ++V+T
Sbjct: 198 QAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVST 257
Query: 258 GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVSLRARS 437
GPF+M IK PC +C+GKGR QR+K+ V +P I++GQT+R+ +
Sbjct: 258 GPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQV---G 314
Query: 438 AQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
++EL+VT RVE+S+ FRR+ +DVH+D ISL L G + V
Sbjct: 315 SKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRV 356
>sp|Q99M87|DNJA3_MOUSE DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (mTid-1)
Length = 480
Score = 144 bits (362), Expect = 2e-34
Identities = 71/159 (44%), Positives = 101/159 (63%)
Frame = +3
Query: 75 ERAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVN 254
++ QE + LTF QAA GVNKE VN+M C RC G +EPGT C C GSG++++N
Sbjct: 206 DQPQEYIMELTFNQAAKGVNKEFTVNIMDTCERCDGKGNEPGTKVQHCHYCGGSGMETIN 265
Query: 255 TGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVSLRAR 434
TGPF+M II NPC C+G G+ Q+K++ + +P ++DGQT+R+ + R
Sbjct: 266 TGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVTIPVPAGVEDGQTVRMPVGKR 325
Query: 435 SAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCG 551
E++VT RV+KS +FRRD +D+HSD+ IS+ L G
Sbjct: 326 ---EIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGG 361
>sp|Q96EY1|DNJA3_HUMAN DnaJ homolog subfamily A member 3, mitochondrial precursor
(Tumorous imaginal discs protein Tid56 homolog) (DnaJ
protein Tid-1) (hTid-1)
Length = 480
Score = 141 bits (355), Expect = 1e-33
Identities = 69/159 (43%), Positives = 101/159 (63%)
Frame = +3
Query: 75 ERAQEVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVN 254
++ QE + LTF QAA GVNKE VN+M C RC G +EPGT C C GSG++++N
Sbjct: 206 DQPQEYFMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETIN 265
Query: 255 TGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVSLRAR 434
TGPF+M II +PC C+G G+ Q+K++ + +P ++DGQT+R+ + R
Sbjct: 266 TGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRVMIPVPAGVEDGQTVRMPVGKR 325
Query: 435 SAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCG 551
E+++T RV+KS +FRRD +D+HSD+ IS+ L G
Sbjct: 326 ---EIFITFRVQKSPVFRRDGADIHSDLFISIAQALLGG 361
>sp|P63969|DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
Length = 373
Score = 110 bits (274), Expect = 3e-24
Identities = 59/165 (35%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Frame = +3
Query: 87 EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNTGPF 266
+V + +T +AA GV K + + C C GS ++PGTS CP+C+GSG + F
Sbjct: 121 QVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTSPETCPTCKGSGTVHIQQAIF 180
Query: 267 LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVS------LR 428
M IK PC C+G GR K + V+IP I DGQ +R+S +
Sbjct: 181 RMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVNIPAGIDDGQRIRLSGEGGPGMH 240
Query: 429 ARSAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
A +LYVTVR+ +F+RD D+H ++ IS AL G++ V
Sbjct: 241 GAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFATAALGGELEV 285
>sp|Q5E3A8|DNAJ_VIBF1 Chaperone protein dnaJ
Length = 379
Score = 110 bits (274), Expect = 3e-24
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Frame = +3
Query: 57 GRDDGPERAQE-----VNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCP 221
GR G +RAQ N+ LT +A G +KE+ V ++ C C G+ ++ GTSST C
Sbjct: 106 GRRGGQQRAQRGSDLRYNMELTLEEAGRGCDKEIEVPTLVSCDPCEGTGAKKGTSSTTCS 165
Query: 222 SCQGSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKD 401
+C G G + G F + IIK+PC+ C G+GRV + K + V IP +
Sbjct: 166 TCHGQGQVQMRQGFFAVQQACPTCHGKGKIIKDPCNSCHGEGRVHKTKTLNVKIPSGVDT 225
Query: 402 GQTLRVSLRARS------AQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
G +R+S + A +LYV V V++ N+F RD ++++ ++ +S + AL G++ V
Sbjct: 226 GDRIRLSGEGEAGEHGAPAGDLYVQVHVKEHNIFERDGNNLYCEVPVSFTMAALGGEVEV 285
>sp|Q73T77|DNAJ2_MYCPA Chaperone protein dnaJ 2
Length = 392
Score = 108 bits (271), Expect = 7e-24
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Frame = +3
Query: 57 GRDDGPERAQ--EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQ 230
GR P R E L F +AA GV L + C C GS + PGTS VCP+C
Sbjct: 136 GRPSRPRRGNDLETETQLDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCN 195
Query: 231 GSGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQT 410
GSGV S N G F II++PC +CKG G ++ + I V IPP ++DGQ
Sbjct: 196 GSGVISRNQGAFGFSEPCTDCRGSGSIIEHPCDECKGTGVTTRTRTINVRIPPGVEDGQR 255
Query: 411 LRV------SLRARSAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
+R+ LR + +LYVTV V +F RD D+ + +S AL I+V
Sbjct: 256 IRLPGQGEAGLRGAPSGDLYVTVHVRPHKVFGRDGDDLTVTVPVSFTELALGSTISV 312
>sp|Q5F5M1|DNAJ_NEIG1 Chaperone protein dnaJ
Length = 373
Score = 108 bits (271), Expect = 7e-24
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Frame = +3
Query: 87 EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQGSGVQSVNTGPF 266
+V + +T +AA GV K + + C C GS ++PG S CP+C+GSG + F
Sbjct: 121 QVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGASPETCPTCKGSGTVHIQQAIF 180
Query: 267 LMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTLRVS------LR 428
M IK PC C+G GR K + V+IP I DGQ +R+S +
Sbjct: 181 RMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVNIPAGIDDGQRIRLSGEGGPGMH 240
Query: 429 ARSAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
A +LYVTVR+ +F+RD D+H ++ IS + AL G++ V
Sbjct: 241 GAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAMAALGGELEV 285
>sp|P0A548|DNAJ1_MYCTU Chaperone protein dnaJ 1
sp|P0A549|DNAJ1_MYCBO Chaperone protein dnaJ 1
Length = 395
Score = 106 bits (264), Expect = 5e-23
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Frame = +3
Query: 60 RDDGPERAQ--EVNVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQG 233
R P R E L F +AA GV L + C C GS + PGTS VCP+C G
Sbjct: 140 RPSRPRRGNDLETETELDFVEAAKGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPTCNG 199
Query: 234 SGVQSVNTGPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKDGQTL 413
SGV + N G F II++PC +CKG G ++ + I V IPP ++DGQ +
Sbjct: 200 SGVINRNQGAFGFSEPCTDCRGSGSIIEHPCEECKGTGVTTRTRTINVRIPPGVEDGQRI 259
Query: 414 RVS------LRARSAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
R++ LR + +LYVTV V +F RD D+ + +S AL ++V
Sbjct: 260 RLAGQGEAGLRGAPSGDLYVTVHVRPDKIFGRDGDDLTVTVPVSFTELALGSTLSV 315
>sp|Q892R1|DNAJ_CLOTE Chaperone protein dnaJ
Length = 375
Score = 105 bits (261), Expect = 1e-22
Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 12/180 (6%)
Frame = +3
Query: 60 RDDGPERAQEV--NVNLTFGQAACGVNKELYVNLMMECGRCGGSKSEPGTSSTVCPSCQG 233
R +GP++ +V ++NLTF +A GV KE+ + C C G+ ++PGT+S CP C G
Sbjct: 110 RRNGPQKGPDVQYSINLTFNEAVFGVEKEVSITKSETCETCTGTGAKPGTNSKTCPKCNG 169
Query: 234 SGVQSV--NT--GPFLMXXXXXXXXXXXXIIKNPCHDCKGKGRVSQRKKIRVSIPPRIKD 401
SG V NT G F+ II +PC DCKGKG V ++KKI+V+IP +
Sbjct: 170 SGQIKVQRNTALGSFVSVNTCDMCGGKGTIISDPCSDCKGKGTVRKQKKIKVNIPAGVDT 229
Query: 402 GQTLRV------SLRARSAQELYVTVRVEKSNLFRRDRSDVHSDITISLPLTALCGKITV 563
G + + + +LY++VRV F+R D++ D IS +L ++ V
Sbjct: 230 GNVIPIRGQGEAGVNGGPPGDLYISVRVMPDPFFKRRGDDIYIDQHISFAKASLGTELKV 289
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,699,658
Number of Sequences: 369166
Number of extensions: 1321545
Number of successful extensions: 3966
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3503
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4078830820
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)