Planaria EST Database


DrC_00324

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00324
         (1281 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28021|CSK2B_XENLA  Casein kinase II beta subunit (CK II ...   377   e-104
sp|P67870|CSK2B_HUMAN  Casein kinase II beta subunit (CK II ...   377   e-104
sp|Q91398|CSK2B_BRARE  Casein kinase II beta subunit (CK II ...   375   e-103
sp|O76485|CSK2B_SPOFR  Casein kinase II beta subunit (CK II ...   373   e-103
sp|P08182|CSK2B_DROME  Casein kinase II beta subunit (CK II ...   367   e-101
sp|P28548|CSK2B_CAEEL  Casein kinase II beta subunit (CK II ...   326   8e-89
sp|O96863|CSK2C_DROME  Casein kinase II beta' subunit (CK II...   249   2e-65
sp|P40232|CSK2B_SCHPO  Casein kinase II beta subunit (CK II ...   240   7e-63
sp|O80507|CSK2E_ARATH  Putative casein kinase II beta-4 subu...   239   1e-62
sp|O81275|CSK2D_ARATH  Casein kinase II beta-3 subunit (CK I...   238   4e-62
>sp|P28021|CSK2B_XENLA Casein kinase II beta subunit (CK II beta) (Phosvitin)
          Length = 215

 Score =  377 bits (969), Expect = e-104
 Identities = 174/210 (82%), Positives = 187/210 (89%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQD+FNLTGLNEQVPHYRQALDMI       
Sbjct: 1   MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDE 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                  QSD+IEQAAEMLYGLIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP L
Sbjct: 61  ELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPML 120

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           PIGLSD+PGEAMVKLYCPKC DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP 
Sbjct: 121 PIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPA 180

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMP 683
           NQFVP+LYGFKIHP+AYQ+Q QAA+N K P
Sbjct: 181 NQFVPRLYGFKIHPMAYQLQLQAASNFKSP 210
>sp|P67870|CSK2B_HUMAN Casein kinase II beta subunit (CK II beta) (Phosvitin) (G5a)
 sp|P67874|CSK2B_RAT Casein kinase II beta subunit (CK II beta) (Phosvitin)
 sp|P67873|CSK2B_RABIT Casein kinase II beta subunit (CK II beta) (Phosvitin)
 sp|P67872|CSK2B_PIG Casein kinase II beta subunit (CK II beta) (Phosvitin)
 sp|P67871|CSK2B_MOUSE Casein kinase II beta subunit (CK II beta) (Phosvitin)
 sp|P67869|CSK2B_CHICK Casein kinase II beta subunit (CK II beta) (Phosvitin)
 sp|P67868|CSK2B_BOVIN Casein kinase II beta subunit (CK II beta) (Phosvitin)
          Length = 215

 Score =  377 bits (969), Expect = e-104
 Identities = 174/210 (82%), Positives = 187/210 (89%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQD+FNLTGLNEQVPHYRQALDMI       
Sbjct: 1   MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDE 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                  QSD+IEQAAEMLYGLIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP L
Sbjct: 61  ELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPML 120

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           PIGLSD+PGEAMVKLYCPKC DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP 
Sbjct: 121 PIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPA 180

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMP 683
           NQFVP+LYGFKIHP+AYQ+Q QAA+N K P
Sbjct: 181 NQFVPRLYGFKIHPMAYQLQLQAASNFKSP 210
>sp|Q91398|CSK2B_BRARE Casein kinase II beta subunit (CK II beta)
          Length = 215

 Score =  375 bits (964), Expect = e-103
 Identities = 173/210 (82%), Positives = 187/210 (89%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQD+FNLTGLNEQVPHYRQALDMI       
Sbjct: 1   MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDE 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                  QSD+IEQAAEMLYGLIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP L
Sbjct: 61  ELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPML 120

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           PIGLSD+PGEAMVKLYCPKC DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP 
Sbjct: 121 PIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPA 180

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMP 683
           NQFVP+LYGFKIHP+AYQ+Q QAA++ K P
Sbjct: 181 NQFVPRLYGFKIHPMAYQLQLQAASSFKSP 210
>sp|O76485|CSK2B_SPOFR Casein kinase II beta subunit (CK II beta)
          Length = 221

 Score =  373 bits (958), Expect = e-103
 Identities = 173/221 (78%), Positives = 192/221 (86%), Gaps = 1/221 (0%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSWISWFCGLRGNEFFCEVDEDYI D+FNLTGLNEQVPHYRQALDMI       
Sbjct: 1   MSSSEEVSWISWFCGLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYRQALDMILDLEPDD 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                  QSD++EQA+E+LYGLIHARYILT RGI QM+EK+Q  +FG+CPRVYCE QP L
Sbjct: 61  DLDDNPNQSDLVEQASEILYGLIHARYILTNRGIGQMLEKFQAGDFGHCPRVYCECQPML 120

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           P+GLSDVPGEAMVKLYCP+C DVYTPKS+RHHHTDGAYFGTGFPHM+F++HPEYRPKRP 
Sbjct: 121 PLGLSDVPGEAMVKLYCPRCMDVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPEYRPKRPA 180

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMPPRN-AYGNGKR 713
           +QFVP+LYGFKIHPLAYQIQ QAAAN K P R+ +Y NGKR
Sbjct: 181 SQFVPRLYGFKIHPLAYQIQQQAAANFKAPLRSLSYNNGKR 221
>sp|P08182|CSK2B_DROME Casein kinase II beta subunit (CK II beta)
          Length = 235

 Score =  367 bits (942), Expect = e-101
 Identities = 172/216 (79%), Positives = 186/216 (86%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSW++WFCGLRGNEFFCEVDEDYIQD+FNLTGLNEQVP+YRQALDMI       
Sbjct: 1   MSSSEEVSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPED 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                  QSD+ EQAAEMLYGLIHARYILT RGIAQMIEK+Q  +FG+CPRVYCE QP L
Sbjct: 61  ELEDNPLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIEKYQTGDFGHCPRVYCESQPML 120

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           P+GLSD+PGEAMVK YCPKC DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP 
Sbjct: 121 PLGLSDIPGEAMVKTYCPKCIDVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPT 180

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMPPRNAYG 701
           NQFVP+LYGFKIH LAYQIQ QAAAN KMP R   G
Sbjct: 181 NQFVPRLYGFKIHSLAYQIQLQAAANFKMPLRAQRG 216
>sp|P28548|CSK2B_CAEEL Casein kinase II beta subunit (CK II beta)
          Length = 234

 Score =  326 bits (836), Expect = 8e-89
 Identities = 149/197 (75%), Positives = 168/197 (85%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           MSSSEEVSWI+WFCGLRGNEFFCEVDE+YIQDRFNLTGLNEQVP YRQALDMI       
Sbjct: 1   MSSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDD 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                   +D++EQAAEMLYGLIHARYILT RGI+QM+EKW+  +FG CPRVYCE QP L
Sbjct: 61  IEDNAT-NTDLVEQAAEMLYGLIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPML 119

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           PIGLSDVPGEAMVKLYCP+C  V+ P+S+RH HTDG+YFGTGFPHMLF +HP+ RP+RP+
Sbjct: 120 PIGLSDVPGEAMVKLYCPRCNMVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPV 179

Query: 594 NQFVPKLYGFKIHPLAY 644
            QFVPKLYGFKIHP+AY
Sbjct: 180 TQFVPKLYGFKIHPVAY 196
>sp|O96863|CSK2C_DROME Casein kinase II beta' subunit (CK II beta')
          Length = 219

 Score =  249 bits (635), Expect = 2e-65
 Identities = 117/211 (55%), Positives = 147/211 (69%)
 Frame = +3

Query: 54  MSSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXX 233
           M+ S+E SWI WFC  RGNEFFCEVDE+YIQD+FNL  L+  V +Y+ AL++I       
Sbjct: 1   MTDSDESSWIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILDLNPGS 60

Query: 234 XXXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSL 413
                      +E +AE LYGLIHAR+ILT RGI  M++K+ + EFG CPR +C  QP L
Sbjct: 61  ASEDPAEPE--LEASAEKLYGLIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVL 118

Query: 414 PIGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPI 593
           PIGLSD PGE MV++YCPKC DVY PK++RH + DGA+FGTGFPHM F+  P+ RPKR  
Sbjct: 119 PIGLSDNPGEDMVRIYCPKCNDVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAK 178

Query: 594 NQFVPKLYGFKIHPLAYQIQYQAAANCKMPP 686
            +FVP+LYGFKIHP AY+   +   +  M P
Sbjct: 179 QKFVPRLYGFKIHPTAYRTAAEIQKDVTMTP 209
>sp|P40232|CSK2B_SCHPO Casein kinase II beta subunit (CK II beta)
          Length = 231

 Score =  240 bits (612), Expect = 7e-63
 Identities = 106/191 (55%), Positives = 139/191 (72%)
 Frame = +3

Query: 60  SSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXX 239
           S +   W+ WF GL+GNEFFCEVDED+IQDRFNLTGL+ +VPHY Q+LD+I         
Sbjct: 10  SDDSQYWVDWFLGLKGNEFFCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLILDVLDPDLP 69

Query: 240 XXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPI 419
                  D +E +A  LYGLIHARYILT +G+ +M+EK+++C+FG+CPRV C  QP LP+
Sbjct: 70  EEV---QDEVEASARHLYGLIHARYILTAQGLYKMLEKYKKCDFGHCPRVLCNGQPMLPV 126

Query: 420 GLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQ 599
           GLSD+     VKLYCP+C+DVYTPKS RH   DGAYFGT FPHMLF ++PE    +   +
Sbjct: 127 GLSDIAHTKSVKLYCPRCEDVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELAVPKSQER 186

Query: 600 FVPKLYGFKIH 632
           ++P+++GFK+H
Sbjct: 187 YIPRIFGFKVH 197
>sp|O80507|CSK2E_ARATH Putative casein kinase II beta-4 subunit (CK II beta-4)
          Length = 283

 Score =  239 bits (610), Expect = 1e-62
 Identities = 105/192 (54%), Positives = 138/192 (71%)
 Frame = +3

Query: 57  SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXX 236
           S  ++ SWISWFC LRGNEFFCEVDEDYIQD FNL GL+ QVP+Y  ALD+I        
Sbjct: 89  SEGDDTSWISWFCNLRGNEFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNG 148

Query: 237 XXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLP 416
                 Q +++E AAEMLYGLIH RYILTT+G+A M+EK++  +FG CPRV+C  Q  LP
Sbjct: 149 DMFTEEQHEMVESAAEMLYGLIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSCLP 208

Query: 417 IGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPIN 596
           +G SD+P  + VK+YCPKC+D+Y P+S    + DGAYFGT FPH+  + +   +P++P  
Sbjct: 209 VGQSDIPRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKPAQ 268

Query: 597 QFVPKLYGFKIH 632
            +VPK++GFK+H
Sbjct: 269 NYVPKIFGFKVH 280
>sp|O81275|CSK2D_ARATH Casein kinase II beta-3 subunit (CK II beta-3)
          Length = 276

 Score =  238 bits (606), Expect = 4e-62
 Identities = 104/192 (54%), Positives = 137/192 (71%)
 Frame = +3

Query: 57  SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXX 236
           S  ++ SWISWFC LRGN+FFCEVDEDYIQD FNL GL+ QVP+Y  ALD+I        
Sbjct: 83  SEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNS 142

Query: 237 XXXXXXQSDIIEQAAEMLYGLIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLP 416
                 Q +++E AAEMLYGLIH RYILTT+G+A M EK++ C+FG CPRV+C  Q  LP
Sbjct: 143 EMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSCLP 202

Query: 417 IGLSDVPGEAMVKLYCPKCQDVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPIN 596
           +G SD+P  + VK+YCPKC+D+  P+S    + DGAYFGT FPH+  + +   +P++P  
Sbjct: 203 VGQSDIPRSSTVKIYCPKCEDISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKPTQ 262

Query: 597 QFVPKLYGFKIH 632
            +VPK++GFK+H
Sbjct: 263 SYVPKIFGFKVH 274
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,995,221
Number of Sequences: 369166
Number of extensions: 2520148
Number of successful extensions: 5494
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5461
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 14861216525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00324

  1. Dr_sW_008_J04
  2. Dr_sW_001_E08
  3. Dr_sW_020_C11
  4. Dr_sW_005_I13
  5. Dr_sW_016_B21
  6. Dr_sW_021_H03
  7. Dr_sW_015_D15