Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_B21
(671 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P28021|CSK2B_XENLA Casein kinase II beta subunit (CK II ... 325 9e-89
sp|P67870|CSK2B_HUMAN Casein kinase II beta subunit (CK II ... 325 9e-89
sp|Q91398|CSK2B_BRARE Casein kinase II beta subunit (CK II ... 323 3e-88
sp|O76485|CSK2B_SPOFR Casein kinase II beta subunit (CK II ... 320 2e-87
sp|P08182|CSK2B_DROME Casein kinase II beta subunit (CK II ... 316 4e-86
sp|P28548|CSK2B_CAEEL Casein kinase II beta subunit (CK II ... 275 1e-73
sp|O96863|CSK2C_DROME Casein kinase II beta' subunit (CK II... 209 4e-54
sp|P40232|CSK2B_SCHPO Casein kinase II beta subunit (CK II ... 207 3e-53
sp|O80507|CSK2E_ARATH Putative casein kinase II beta-4 subu... 197 2e-50
sp|O81275|CSK2D_ARATH Casein kinase II beta-3 subunit (CK I... 197 2e-50
>sp|P28021|CSK2B_XENLA Casein kinase II beta subunit (CK II beta) (Phosvitin)
Length = 215
Score = 325 bits (832), Expect = 9e-89
Identities = 151/189 (79%), Positives = 164/189 (86%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD+FNLTGLNEQVPHYRQALDMI QSD+IEQAAEMLYG
Sbjct: 22 FCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYG 81
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP LPIGLSD+PGEAMVKLYCPKC
Sbjct: 82 LIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCM 141
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP NQFVP+LYGFKIHP+AYQ+Q
Sbjct: 142 DVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQL 201
Query: 541 QAAANCKMP 567
QAA+N K P
Sbjct: 202 QAASNFKSP 210
>sp|P67870|CSK2B_HUMAN Casein kinase II beta subunit (CK II beta) (Phosvitin) (G5a)
sp|P67874|CSK2B_RAT Casein kinase II beta subunit (CK II beta) (Phosvitin)
sp|P67873|CSK2B_RABIT Casein kinase II beta subunit (CK II beta) (Phosvitin)
sp|P67872|CSK2B_PIG Casein kinase II beta subunit (CK II beta) (Phosvitin)
sp|P67871|CSK2B_MOUSE Casein kinase II beta subunit (CK II beta) (Phosvitin)
sp|P67869|CSK2B_CHICK Casein kinase II beta subunit (CK II beta) (Phosvitin)
sp|P67868|CSK2B_BOVIN Casein kinase II beta subunit (CK II beta) (Phosvitin)
Length = 215
Score = 325 bits (832), Expect = 9e-89
Identities = 151/189 (79%), Positives = 164/189 (86%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD+FNLTGLNEQVPHYRQALDMI QSD+IEQAAEMLYG
Sbjct: 22 FCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYG 81
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP LPIGLSD+PGEAMVKLYCPKC
Sbjct: 82 LIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCM 141
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP NQFVP+LYGFKIHP+AYQ+Q
Sbjct: 142 DVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQL 201
Query: 541 QAAANCKMP 567
QAA+N K P
Sbjct: 202 QAASNFKSP 210
>sp|Q91398|CSK2B_BRARE Casein kinase II beta subunit (CK II beta)
Length = 215
Score = 323 bits (827), Expect = 3e-88
Identities = 150/189 (79%), Positives = 164/189 (86%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD+FNLTGLNEQVPHYRQALDMI QSD+IEQAAEMLYG
Sbjct: 22 FCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYG 81
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGIAQM+EK+QQ +FGYCPRVYCE QP LPIGLSD+PGEAMVKLYCPKC
Sbjct: 82 LIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCM 141
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP NQFVP+LYGFKIHP+AYQ+Q
Sbjct: 142 DVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPANQFVPRLYGFKIHPMAYQLQL 201
Query: 541 QAAANCKMP 567
QAA++ K P
Sbjct: 202 QAASSFKSP 210
>sp|O76485|CSK2B_SPOFR Casein kinase II beta subunit (CK II beta)
Length = 221
Score = 320 bits (821), Expect = 2e-87
Identities = 150/200 (75%), Positives = 169/200 (84%), Gaps = 1/200 (0%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYI D+FNLTGLNEQVPHYRQALDMI QSD++EQA+E+LYG
Sbjct: 22 FCEVDEDYINDKFNLTGLNEQVPHYRQALDMILDLEPDDDLDDNPNQSDLVEQASEILYG 81
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGI QM+EK+Q +FG+CPRVYCE QP LP+GLSDVPGEAMVKLYCP+C
Sbjct: 82 LIHARYILTNRGIGQMLEKFQAGDFGHCPRVYCECQPMLPLGLSDVPGEAMVKLYCPRCM 141
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVYTPKS+RHHHTDGAYFGTGFPHM+F++HPEYRPKRP +QFVP+LYGFKIHPLAYQIQ
Sbjct: 142 DVYTPKSSRHHHTDGAYFGTGFPHMVFMVHPEYRPKRPASQFVPRLYGFKIHPLAYQIQQ 201
Query: 541 QAAANCKMPPRN-AYGNGKR 597
QAAAN K P R+ +Y NGKR
Sbjct: 202 QAAANFKAPLRSLSYNNGKR 221
>sp|P08182|CSK2B_DROME Casein kinase II beta subunit (CK II beta)
Length = 235
Score = 316 bits (809), Expect = 4e-86
Identities = 151/195 (77%), Positives = 163/195 (83%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD+FNLTGLNEQVP+YRQALDMI QSD+ EQAAEMLYG
Sbjct: 22 FCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDELEDNPLQSDMTEQAAEMLYG 81
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGIAQMIEK+Q +FG+CPRVYCE QP LP+GLSD+PGEAMVK YCPKC
Sbjct: 82 LIHARYILTNRGIAQMIEKYQTGDFGHCPRVYCESQPMLPLGLSDIPGEAMVKTYCPKCI 141
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVYTPKS+RHHHTDGAYFGTGFPHMLF++HPEYRPKRP NQFVP+LYGFKIH LAYQIQ
Sbjct: 142 DVYTPKSSRHHHTDGAYFGTGFPHMLFMVHPEYRPKRPTNQFVPRLYGFKIHSLAYQIQL 201
Query: 541 QAAANCKMPPRNAYG 585
QAAAN KMP R G
Sbjct: 202 QAAANFKMPLRAQRG 216
>sp|P28548|CSK2B_CAEEL Casein kinase II beta subunit (CK II beta)
Length = 234
Score = 275 bits (702), Expect = 1e-73
Identities = 127/176 (72%), Positives = 145/176 (82%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDE+YIQDRFNLTGLNEQVP YRQALDMI +D++EQAAEMLYG
Sbjct: 22 FCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPDDIEDNAT-NTDLVEQAAEMLYG 80
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT RGI+QM+EKW+ +FG CPRVYCE QP LPIGLSDVPGEAMVKLYCP+C
Sbjct: 81 LIHARYILTNRGISQMVEKWRDHDFGVCPRVYCENQPMLPIGLSDVPGEAMVKLYCPRCN 140
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAY 528
V+ P+S+RH HTDG+YFGTGFPHMLF +HP+ RP+RP+ QFVPKLYGFKIHP+AY
Sbjct: 141 MVFVPRSSRHQHTDGSYFGTGFPHMLFFVHPDLRPRRPVTQFVPKLYGFKIHPVAY 196
>sp|O96863|CSK2C_DROME Casein kinase II beta' subunit (CK II beta')
Length = 219
Score = 209 bits (533), Expect = 4e-54
Identities = 101/190 (53%), Positives = 129/190 (67%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDE+YIQD+FNL L+ V +Y+ AL++I +E +AE LYG
Sbjct: 22 FCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILDLNPGSASEDPAEPE--LEASAEKLYG 79
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHAR+ILT RGI M++K+ + EFG CPR +C QP LPIGLSD PGE MV++YCPKC
Sbjct: 80 LIHARFILTNRGIELMLDKYNKGEFGTCPRAFCHSQPVLPIGLSDNPGEDMVRIYCPKCN 139
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIHPLAYQIQY 540
DVY PK++RH + DGA+FGTGFPHM F+ P+ RPKR +FVP+LYGFKIHP AY+
Sbjct: 140 DVYIPKASRHSNLDGAFFGTGFPHMFFMEKPDARPKRAKQKFVPRLYGFKIHPTAYRTAA 199
Query: 541 QAAANCKMPP 570
+ + M P
Sbjct: 200 EIQKDVTMTP 209
>sp|P40232|CSK2B_SCHPO Casein kinase II beta subunit (CK II beta)
Length = 231
Score = 207 bits (526), Expect = 3e-53
Identities = 94/172 (54%), Positives = 124/172 (72%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDED+IQDRFNLTGL+ +VPHY Q+LD+I D +E +A LYG
Sbjct: 29 FCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLILDVLDPDLPEEV---QDEVEASARHLYG 85
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIHARYILT +G+ +M+EK+++C+FG+CPRV C QP LP+GLSD+ VKLYCP+C+
Sbjct: 86 LIHARYILTAQGLYKMLEKYKKCDFGHCPRVLCNGQPMLPVGLSDIAHTKSVKLYCPRCE 145
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIH 516
DVYTPKS RH DGAYFGT FPHMLF ++PE + +++P+++GFK+H
Sbjct: 146 DVYTPKSQRHASIDGAYFGTSFPHMLFQVYPELAVPKSQERYIPRIFGFKVH 197
>sp|O80507|CSK2E_ARATH Putative casein kinase II beta-4 subunit (CK II beta-4)
Length = 283
Score = 197 bits (502), Expect = 2e-50
Identities = 89/172 (51%), Positives = 120/172 (69%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD FNL GL+ QVP+Y ALD+I Q +++E AAEMLYG
Sbjct: 109 FCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLYG 168
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIH RYILTT+G+A M+EK++ +FG CPRV+C Q LP+G SD+P + VK+YCPKC+
Sbjct: 169 LIHVRYILTTKGMAAMMEKYKNYDFGRCPRVFCCGQSCLPVGQSDIPRSSTVKIYCPKCE 228
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIH 516
D+Y P+S + DGAYFGT FPH+ + + +P++P +VPK++GFK+H
Sbjct: 229 DIYYPRSKYQGNIDGAYFGTTFPHLFLMAYGNMKPQKPAQNYVPKIFGFKVH 280
>sp|O81275|CSK2D_ARATH Casein kinase II beta-3 subunit (CK II beta-3)
Length = 276
Score = 197 bits (501), Expect = 2e-50
Identities = 89/172 (51%), Positives = 119/172 (69%)
Frame = +1
Query: 1 FL*VDEDYIQDRFNLTGLNEQVPHYRQALDMIXXXXXXXXXXXXXXQSDIIEQAAEMLYG 180
F VDEDYIQD FNL GL+ QVP+Y ALD+I Q +++E AAEMLYG
Sbjct: 103 FCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYG 162
Query: 181 LIHARYILTTRGIAQMIEKWQQCEFGYCPRVYCEIQPSLPIGLSDVPGEAMVKLYCPKCQ 360
LIH RYILTT+G+A M EK++ C+FG CPRV+C Q LP+G SD+P + VK+YCPKC+
Sbjct: 163 LIHVRYILTTKGMAAMTEKYKNCDFGRCPRVFCCGQSCLPVGQSDIPRSSTVKIYCPKCE 222
Query: 361 DVYTPKSTRHHHTDGAYFGTGFPHMLFLMHPEYRPKRPINQFVPKLYGFKIH 516
D+ P+S + DGAYFGT FPH+ + + +P++P +VPK++GFK+H
Sbjct: 223 DISYPRSKFQGNIDGAYFGTTFPHLFLMTYGNLKPQKPTQSYVPKIFGFKVH 274
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,141,992
Number of Sequences: 369166
Number of extensions: 1388945
Number of successful extensions: 2913
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2882
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5636246860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)