Planaria EST Database

DrC_00026

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00026
         (1272 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99MN1|SYK_MOUSE  Lysyl-tRNA synthetase (Lysine--tRNA lig...   562   e-160
sp|P37879|SYK_CRIGR  Lysyl-tRNA synthetase (Lysine--tRNA lig...   560   e-159
sp|Q15046|SYK_HUMAN  Lysyl-tRNA synthetase (Lysine--tRNA lig...   559   e-159
sp|Q22099|SYK_CAEEL  Lysyl-tRNA synthetase (Lysine--tRNA lig...   537   e-152
sp|Q6F2U9|SYK_ORYSA  Lysyl-tRNA synthetase (Lysine--tRNA lig...   525   e-148
sp|Q9ZPI1|SYK_ARATH  Lysyl-tRNA synthetase (Lysine--tRNA lig...   506   e-143
sp|P15180|SYKC_YEAST  Lysyl-tRNA synthetase, cytoplasmic (Ly...   478   e-134
sp|Q43776|SYK_LYCES  Lysyl-tRNA synthetase (Lysine--tRNA lig...   453   e-127
sp|O67258|SYK_AQUAE  Lysyl-tRNA synthetase (Lysine--tRNA lig...   366   e-101
sp|Q9X231|SYK_THEMA  Lysyl-tRNA synthetase (Lysine--tRNA lig...   353   5e-97

>sp|Q99MN1|SYK_MOUSE Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 595

 Score =  562 bits (1448), Expect = e-160
 Identities = 264/409 (64%), Positives = 336/409 (82%), Gaps = 3/409 (0%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRY 180
            EF  I   ++RGD+IGV G+PGK+K GE+SIIP+ I +LSP L  +PHLHFGLKD+E+RY
Sbjct: 166  EFVHINNKLRRGDIIGVEGNPGKTKKGELSIIPQEITLLSPCLHMLPHLHFGLKDKETRY 225

Query: 181  RFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYH 360
            R R LD+ +N  V Q F++R KI+++I+ FL ++GF+++ETPM+N+IPGGA AKPF TYH
Sbjct: 226  RQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYH 285

Query: 361  NDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADY 540
            N+ +M++Y+RIAPEL+ K L++GG++RV+EIG+QFRNE +DLTHNPEFTTCEFYMA+ADY
Sbjct: 286  NELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADY 345

Query: 541  FDLITVTEDLLSNLVKELFGDYIVKYNKDG---KTYEIDFKPPYQRIDMMTGLEEALKMK 711
             DL+ +TE +LS +VK + G Y + Y+ DG   + YE+DF PP++RI M+  LE+AL +K
Sbjct: 346  HDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEVDFTPPFRRISMVEELEKALGVK 405

Query: 712  LPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPE 891
            LP  +   TEE+R ILD IC    VEC  PRTTARLLDKLVGE+LE  CI+PTFI +HP+
Sbjct: 406  LPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCISPTFICDHPQ 465

Query: 892  IMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAM 1071
            IMSPLAKWHR+  GLTERFELFVMKKE+CNAYTELNDP+ QR+ FE+QAK KAAGD+EAM
Sbjct: 466  IMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQAKAKAAGDDEAM 525

Query: 1072 FVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
            F+DE F  A+E G+PPTAGWG+GIDRLTMFLTD++NIKEVL FPAMKPE
Sbjct: 526  FIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAMKPE 574

>sp|P37879|SYK_CRIGR Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 597

 Score =  560 bits (1444), Expect = e-159
 Identities = 265/409 (64%), Positives = 335/409 (81%), Gaps = 3/409 (0%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRY 180
            EF  I   ++RGD+IGV G+PGK+K GE+SIIP  I +LSP L  +PHLHFGLKD+E+RY
Sbjct: 168  EFVRINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRY 227

Query: 181  RFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYH 360
            R R LD+ +N  V Q F++R KI+++I+ FL ++GF+++ETPM+N+IPGGA AKPF TYH
Sbjct: 228  RQRYLDLILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYH 287

Query: 361  NDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADY 540
            N+ +M++Y+RIAPEL+ K L++GG++RV+EIG+QFRNE +DLTHNPEFTTCEFYMA+ADY
Sbjct: 288  NELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADY 347

Query: 541  FDLITVTEDLLSNLVKELFGDYIVKYNKDG---KTYEIDFKPPYQRIDMMTGLEEALKMK 711
             DL+ +TE +LS +VK + G Y + Y+ DG   + YEIDF PP++RI M+  LE+AL +K
Sbjct: 348  HDLMEITEKMLSGMVKSITGSYKITYHPDGPEGEAYEIDFTPPFRRISMVEELEKALGVK 407

Query: 712  LPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPE 891
            LP  +   TEE+R ILD IC    VEC  PRTTARLLDKLVGE+LE  CINPTFI +HP+
Sbjct: 408  LPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQ 467

Query: 892  IMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAM 1071
            IMSPLAKWHR+  GLTERFELFVMKKE+CNAYTELNDP+ QR+ FE+QAK KAAGD+EAM
Sbjct: 468  IMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAM 527

Query: 1072 FVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
            F+DE F  A+E G+PPTAGWG+GIDR+TMFLTD++NIKEVL FPAMKPE
Sbjct: 528  FIDENFCTALEYGLPPTAGWGMGIDRVTMFLTDSNNIKEVLLFPAMKPE 576

>sp|Q15046|SYK_HUMAN Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 597

 Score =  559 bits (1440), Expect = e-159
 Identities = 264/409 (64%), Positives = 334/409 (81%), Gaps = 3/409 (0%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRY 180
            EF  I   ++RGD+IGV G+PGK+K GE+SIIP  I +LSP L  +PHLHFGLKD+E+RY
Sbjct: 168  EFIHINNKLRRGDIIGVQGNPGKTKKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRY 227

Query: 181  RFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYH 360
            R R LD+ +N  V Q F+IR KI+++I+ FL ++GF+++ETPM+N+IPGGA AKPF TYH
Sbjct: 228  RQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITYH 287

Query: 361  NDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADY 540
            N+ +M++Y+RIAPEL+ K L++GG++RV+EIG+QFRNE +DLTHNPEFTTCEFYMA+ADY
Sbjct: 288  NELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADY 347

Query: 541  FDLITVTEDLLSNLVKELFGDYIVKYNKDG---KTYEIDFKPPYQRIDMMTGLEEALKMK 711
             DL+ +TE ++S +VK + G Y V Y+ DG   + Y++DF PP++RI+M+  LE+AL MK
Sbjct: 348  HDLMEITEKMVSGMVKHITGSYKVTYHPDGPEGQAYDVDFTPPFRRINMVEELEKALGMK 407

Query: 712  LPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPE 891
            LP      TEE+R ILD IC    VEC  PRTTARLLDKLVGE+LE  CINPTFI +HP+
Sbjct: 408  LPETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQ 467

Query: 892  IMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAM 1071
            IMSPLAKWHR+  GLTERFELFVMKKE+CNAYTELNDP+ QR+ FE+QAK KAAGD+EAM
Sbjct: 468  IMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEAM 527

Query: 1072 FVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
            F+DE F  A+E G+PPTAGWG+GIDR+ MFLTD++NIKEVL FPAMKPE
Sbjct: 528  FIDENFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPE 576

>sp|Q22099|SYK_CAEEL Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 572

 Score =  537 bits (1383), Expect = e-152
 Identities = 248/415 (59%), Positives = 327/415 (78%), Gaps = 4/415 (0%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRY 180
            +F  + + +KRGD++G  G   ++K GE+S+IP  I  L+P L  +PH HFGLKD+E R+
Sbjct: 147  DFVTLHDRIKRGDIVGFTGRATRTKAGELSLIPNEILQLTPCLHMLPHSHFGLKDKELRF 206

Query: 181  RFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYH 360
            R R LD+ +NP V   FVIR KI++F++ +L  +GF++VETP++N I GGA AKPF T+H
Sbjct: 207  RKRYLDLILNPRVKDNFVIRSKIITFLRRYLDNLGFLEVETPIMNQIAGGATAKPFITHH 266

Query: 361  NDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADY 540
            ND +M+++LR+APEL+ K L++GG++RV+E+G+ FRNE +DLTHNPEFTTCEFYMA+ADY
Sbjct: 267  NDLDMNLFLRVAPELYHKMLVVGGIDRVYEVGRLFRNEGIDLTHNPEFTTCEFYMAYADY 326

Query: 541  FDLITVTEDLLSNLVKELFGDYIVKYNKDGKT----YEIDFKPPYQRIDMMTGLEEALKM 708
             D+I +TEDLLS++V  + G Y ++Y+ +G      YE+DF PP++R+ M  GL E L  
Sbjct: 327  EDVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGA 386

Query: 709  KLPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHP 888
             LP P+ L TEE+R + DK+C DNNV+CSAPRTTARLLDKLVGEYLE   I+PTF++ HP
Sbjct: 387  TLPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHP 446

Query: 889  EIMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEA 1068
            +IMSPLAKWHR++PGLTERFELF + +E+ NAYTELNDPI QR+RFEQQAKDK AGD+EA
Sbjct: 447  QIMSPLAKWHRSIPGLTERFELFAVTREIANAYTELNDPITQRQRFEQQAKDKDAGDDEA 506

Query: 1069 MFVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPEFGIKK 1233
              +DETF  A+E G+PPT GWG+GIDRL+M LTD +NIKEVL FPAM+PE G +K
Sbjct: 507  QMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNNNIKEVLLFPAMRPEDGTEK 561

>sp|Q6F2U9|SYK_ORYSA Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 602

 Score =  525 bits (1351), Expect = e-148
 Identities = 257/429 (59%), Positives = 324/429 (75%), Gaps = 23/429 (5%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLH---------- 150
            EF +   ++KRGD++GV G+PGKSK GE+SI PK I +LSP L  MP             
Sbjct: 175  EFIKFHSTLKRGDIVGVCGYPGKSKRGELSIFPKKIVVLSPCLHMMPRQKSEGSAVPTPW 234

Query: 151  ----------FGLKDQESRYRFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVE 300
                      + L+DQE+RYR R LD+ +N EV  IF  R K+VSFI+ FL  + F++VE
Sbjct: 235  APGMGRNIEKYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVE 294

Query: 301  TPMLNMIPGGAAAKPFKTYHNDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESV 480
            TPM+NMI GGAAA+PF T+HN+ NM +Y+RIAPEL+LKEL++GG++RV+EIGKQFRNE +
Sbjct: 295  TPMMNMIAGGAAARPFVTHHNELNMRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGI 354

Query: 481  DLTHNPEFTTCEFYMAFADYFDLITVTEDLLSNLVKELFGDYIVKYNKDG---KTYEIDF 651
            DLTHNPEFTTCEFYMA+ADY DLI +TE +LS +VKEL G Y +KY+ +G      EIDF
Sbjct: 355  DLTHNPEFTTCEFYMAYADYNDLIELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDF 414

Query: 652  KPPYQRIDMMTGLEEALKMKLPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDKL 831
             PP+++IDM+  LE   K+ +P   +L ++E+   L   CA  +V+C  P+TT RLLDKL
Sbjct: 415  TPPFRKIDMIEELEAMAKLNIP--KDLSSDEANKYLIDACAKYDVKCPPPQTTTRLLDKL 472

Query: 832  VGEYLEEKCINPTFIMNHPEIMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIV 1011
            VG +LEE C+NPTFI+NHPEIMSPLAKWHR+ PGLTERFELFV K E+CNAYTELNDP+V
Sbjct: 473  VGHFLEETCVNPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVV 532

Query: 1012 QRERFEQQAKDKAAGDEEAMFVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEV 1191
            QR+RFE+Q KD+ +GD+EAM +DETF  A+E G+PPT GWGLGIDRLTM LTD+ NIKEV
Sbjct: 533  QRQRFEEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEV 592

Query: 1192 LCFPAMKPE 1218
            L FPAMKP+
Sbjct: 593  LLFPAMKPQ 601

>sp|Q9ZPI1|SYK_ARATH Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 626

 Score =  506 bits (1303), Expect = e-143
 Identities = 253/429 (58%), Positives = 318/429 (74%), Gaps = 24/429 (5%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLH---------- 150
            EF ++  + KRGD++GV+G PGK+K GE+SI P+S  +LS  L  MP             
Sbjct: 183  EFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRKADNVNAKKPEI 242

Query: 151  -----------FGLKDQESRYRFRSLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQV 297
                       + LKDQESRYR R LDM +N EV QIF  R KI+S+++ FL    F++V
Sbjct: 243  WVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLDNKNFLEV 302

Query: 298  ETPMLNMIPGGAAAKPFKTYHNDFNMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNES 477
            ETPM+NMI GGAAA+PF T+HND +M +Y+RIAPEL+LK+LI+GG+ RV+EIGKQFRNE 
Sbjct: 303  ETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIGKQFRNEG 362

Query: 478  VDLTHNPEFTTCEFYMAFADYFDLITVTEDLLSNLVKELFGDYIVKYNKDG---KTYEID 648
            +DLTHNPEFTTCEFYMAFADY DL+ +TE +LS +VKEL G Y +KYN +G      EID
Sbjct: 363  IDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYDKDPIEID 422

Query: 649  FKPPYQRIDMMTGLEEALKMKLPLPTELGTEESRLILDKICADNNVECSAPRTTARLLDK 828
            F PP++RI+M+  LE+  K+ +P   +L +EE+   L   CA  +V+C  P+TTARLLDK
Sbjct: 423  FTPPFRRIEMIGELEKVAKLNIP--KDLASEEANKYLIDACARFDVKCPPPQTTARLLDK 480

Query: 829  LVGEYLEEKCINPTFIMNHPEIMSPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPI 1008
            LVGE+LE  C+NPTFI+N PEIMSPLAKWHR+  GLTERFELF+ K ELCNAYTELNDP+
Sbjct: 481  LVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTELNDPV 540

Query: 1009 VQRERFEQQAKDKAAGDEEAMFVDETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKE 1188
            VQR+RF  Q KD+ +GD+EAM +DETF  A+E G+ PT GWGLGIDRL+M LTD+ NIKE
Sbjct: 541  VQRQRFADQLKDRQSGDDEAMALDETFCNALEYGLAPTGGWGLGIDRLSMLLTDSLNIKE 600

Query: 1189 VLCFPAMKP 1215
            VL FPAM+P
Sbjct: 601  VLFFPAMRP 609

>sp|P15180|SYKC_YEAST Lysyl-tRNA synthetase, cytoplasmic (Lysine--tRNA ligase) (LysRS)
          Length = 591

 Score =  478 bits (1231), Expect = e-134
 Identities = 230/407 (56%), Positives = 303/407 (74%), Gaps = 9/407 (2%)
 Frame = +1

Query: 25   VKRGDVIGVVGHPGKSKL-----GEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRYRFR 189
            +KRGD++GV G+ G+++      GEVS+    +Q+L+P L  +P  HFG KDQE+RYR R
Sbjct: 174  LKRGDIVGVEGYVGRTQPKKGGEGEVSVFVSRVQLLTPCLHMLPADHFGFKDQETRYRKR 233

Query: 190  SLDMQMNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYHNDF 369
             LD+ MN +    F+ R +I+ +I+ FL Q  FI+VETPM+N+I GGA AKPF T+HND 
Sbjct: 234  YLDLIMNKDARNRFITRSEIIRYIRRFLDQRKFIEVETPMMNVIAGGATAKPFITHHNDL 293

Query: 370  NMDMYLRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADYFDL 549
            +MDMY+RIAPELFLK+L++GG++RV+EIG+QFRNE +D+THNPEFTTCEFY A+AD +DL
Sbjct: 294  DMDMYMRIAPELFLKQLVVGGLDRVYEIGRQFRNEGIDMTHNPEFTTCEFYQAYADVYDL 353

Query: 550  ITVTEDLLSNLVKELFGDYIVKYNKD----GKTYEIDFKPPYQRIDMMTGLEEALKMKLP 717
            + +TE + S +VKE+ G YI+KY+ D     K  E++F  P++RI+M+  LE+   +K P
Sbjct: 354  MDMTELMFSEMVKEITGSYIIKYHPDPADPAKELELNFSRPWKRINMIEELEKVFNVKFP 413

Query: 718  LPTELGTEESRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPEIM 897
               +L T E+   L KI  DN +EC  P T AR+LDKLVGE LE+ CINPTFI  HP++M
Sbjct: 414  SGDQLHTAETGEFLKKILVDNKLECPPPLTNARMLDKLVGE-LEDTCINPTFIFGHPQMM 472

Query: 898  SPLAKWHRNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAMFV 1077
            SPLAK+ R+ PGL ERFE+FV  KE+CNAYTELNDP  QR RFE+QA+ K  GD+EA  V
Sbjct: 473  SPLAKYSRDQPGLCERFEVFVATKEICNAYTELNDPFDQRARFEEQARQKDQGDDEAQLV 532

Query: 1078 DETFLEAMELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
            DETF  A+E G+PPT GWG GIDRL MFLTD++ I+EVL FP +KP+
Sbjct: 533  DETFCNALEYGLPPTGGWGCGIDRLAMFLTDSNTIREVLLFPTLKPD 579

>sp|Q43776|SYK_LYCES Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 588

 Score =  453 bits (1165), Expect = e-127
 Identities = 222/439 (50%), Positives = 306/439 (69%), Gaps = 35/439 (7%)
 Frame = +1

Query: 1    EFSEIVESVKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHL----------- 147
            +FS     VKRGD+IGV G+PGKSK GE+SI  K   +L+P L  +P             
Sbjct: 150  QFSNYQSGVKRGDIIGVRGYPGKSKRGELSIFAKPFIVLAPCLHMLPRRLTSSIVDETRT 209

Query: 148  ---------------------HFGLKDQESRYRFRSLDMQMNPEVIQIFVIRDKIVSFIQ 264
                                  + L+DQE+RYR R LD+ MNPEV  +F  R +I+S+I+
Sbjct: 210  QNFQGITAYDTWTPGDLRNPESYVLRDQETRYRQRYLDLMMNPEVRALFRTRARIISYIR 269

Query: 265  HFLRQMGFIQVETPMLNMIPGGAAAKPFKTYHNDFNMDMYLRIAPELFLKELIIGGMNRV 444
             FL  + F++VETP +N+  GGA+A+PF T+HN+ + ++ +R++PEL+LK+L++GG +RV
Sbjct: 270  SFLDNLEFLEVETPSMNLTAGGASARPFITHHNELDTELLIRVSPELYLKKLVVGGFDRV 329

Query: 445  FEIGKQFRNESVDLTHNPEFTTCEFYMAFADYFDLITVTEDLLSNLVKELFGDYIVKYNK 624
            +E+GK FRNE +DLTH+PEFT CE YMA+ADY DL+ +TE LLS +VK+L G Y ++Y+ 
Sbjct: 330  YELGKHFRNEGMDLTHSPEFTMCELYMAYADYNDLMDLTEQLLSGMVKDLTGSYKIRYHA 389

Query: 625  DG---KTYEIDFKPPYQRIDMMTGLEEALKMKLPLPTELGTEESRLILDKICADNNVECS 795
            +G   +  EIDF PP+++IDM++ LE+     + +P +L +E +   L  +C   +V+C 
Sbjct: 390  NGLDNEPIEIDFTPPFRKIDMLSELEKV--ANISIPRDLSSESANKHLVDVCEKFDVKCP 447

Query: 796  APRTTARLLDKLVGEYLEEKCINPTFIMNHPEIMSPLAKWHRNVPGLTERFELFVMKKEL 975
             P TT RLLDKLVG ++E  CINPTFI+NHPEIMSPLAK  R+ PGLTERF LFV ++EL
Sbjct: 448  PPHTTTRLLDKLVGHFIEVNCINPTFIINHPEIMSPLAKSRRSEPGLTERFNLFVNRREL 507

Query: 976  CNAYTELNDPIVQRERFEQQAKDKAAGDEEAMFVDETFLEAMELGMPPTAGWGLGIDRLT 1155
            C+AYTELNDP  QRERF +Q KD+  GD+EAM +DE+F+ A+E G+PPT G G+GIDRLT
Sbjct: 508  CDAYTELNDPTAQRERFAEQLKDRQLGDDEAMDLDESFITALEYGLPPTGGLGMGIDRLT 567

Query: 1156 MFLTDTDNIKEVLCFPAMK 1212
            M LTD+ N+KEV+ FPAM+
Sbjct: 568  MLLTDSQNVKEVILFPAMR 586

>sp|O67258|SYK_AQUAE Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 597

 Score =  366 bits (939), Expect = e-101
 Identities = 191/400 (47%), Positives = 262/400 (65%), Gaps = 5/400 (1%)
 Frame = +1

Query: 34   GDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRYRFRSLDMQMNP 213
            GD++GV G   ++  GE+++  +  Q+L+ SL  +P    GLKD E RYR R LD+  NP
Sbjct: 205  GDIVGVRGKLFRTNTGELTVEVEEYQLLAKSLHPLPEKWHGLKDVEVRYRQRYLDLIANP 264

Query: 214  EVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYHNDFNMDMYLRI 393
            E  +IF++R K+++ ++ F    GFI+VETP+L  I  GA A+PF TYHN    ++YLRI
Sbjct: 265  EARRIFMLRTKLITEMRKFFEMHGFIEVETPILQPIASGANARPFVTYHNFLETELYLRI 324

Query: 394  APELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADYFDLITVTEDLL 573
            APEL+LK LI+GG  RV+EIGK FRNESVD THNPEFT  EFY A+ DY DLI  TED+ 
Sbjct: 325  APELYLKRLIVGGFPRVYEIGKNFRNESVDRTHNPEFTMVEFYAAYWDYHDLIKFTEDMF 384

Query: 574  SNLVKELFGDYIVKYNKDGKTYEIDFKPPYQRIDMMTGLEEALKMKLPLPTELGTEESRL 753
              L+++  G   VKY +    +E+DF PP++++     L+E          + G ++   
Sbjct: 385  VYLLEKTLGTLKVKYGE----WELDFSPPFKKVRYFDLLKE----------KTGKDKDFF 430

Query: 754  ILD-----KICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPEIMSPLAKWH 918
            + D     K+  +  +      T A+LLDK+  +  EE  I PTF+++ P+I+SPLAK H
Sbjct: 431  LKDLEGLRKLAKELEIPDVERMTHAKLLDKVFEKVAEEDLIQPTFVIDFPKILSPLAKTH 490

Query: 919  RNVPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAMFVDETFLEA 1098
            R  P L ERFEL + + E+ NAYTELNDP  Q+ERF +Q K+K  GDEEAM +DE F+ A
Sbjct: 491  REDPDLVERFELIIARYEVANAYTELNDPFDQKERFLEQLKEKQMGDEEAMDMDEDFIRA 550

Query: 1099 MELGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
            +E GMPPTAG G+GIDRL M L +TD+I+EV+ FP +KPE
Sbjct: 551  LEYGMPPTAGEGIGIDRLVMILANTDSIREVILFPQLKPE 590

>sp|Q9X231|SYK_THEMA Lysyl-tRNA synthetase (Lysine--tRNA ligase) (LysRS)
          Length = 502

 Score =  353 bits (907), Expect = 5e-97
 Identities = 187/398 (46%), Positives = 267/398 (67%)
 Frame = +1

Query: 25   VKRGDVIGVVGHPGKSKLGEVSIIPKSIQILSPSLKQMPHLHFGLKDQESRYRFRSLDMQ 204
            VK GD +GV G P KSK GE++I  +   +LS +L+ +P    G+KD+E  YR R L++ 
Sbjct: 103  VKIGDFVGVRGFPFKSKTGELTIYVQEYTLLSKALRPLPEKWHGIKDKEIIYRQRYLELI 162

Query: 205  MNPEVIQIFVIRDKIVSFIQHFLRQMGFIQVETPMLNMIPGGAAAKPFKTYHNDFNMDMY 384
            +N E I+ F  R K V  I+ FL   GFI+VETP+L+ + GGA A+PF T+ N F++DMY
Sbjct: 163  VNDEAIERFKKRFKAVRVIREFLNSRGFIEVETPILHYVTGGAEARPFVTHLNVFDIDMY 222

Query: 385  LRIAPELFLKELIIGGMNRVFEIGKQFRNESVDLTHNPEFTTCEFYMAFADYFDLITVTE 564
            LRIAPEL+LK LI+GG  +++EIGK FRNE +   H+PEFT+ E Y A+ADY D++ +TE
Sbjct: 223  LRIAPELYLKRLIVGGFEKIYEIGKNFRNEGISYKHSPEFTSIEIYQAYADYNDMMDLTE 282

Query: 565  DLLSNLVKELFGDYIVKYNKDGKTYEIDFKPPYQRIDMMTGLEEALKMKLPLPTELGTEE 744
            +L+  +VK   G   + Y   GK  EIDF PP++R+ M   L+E L + +        E+
Sbjct: 283  ELIVEVVKRTCGTLKISY--QGK--EIDFTPPWKRVRMRDFLKEKLGVDI-------LED 331

Query: 745  SRLILDKICADNNVECSAPRTTARLLDKLVGEYLEEKCINPTFIMNHPEIMSPLAKWHRN 924
               +L K   ++ VE    +  A L+DKL  + +EE+ +NPTFI++HP ++SPLAK HR 
Sbjct: 332  PDEVLLKKLEEHGVELEI-KNRAHLIDKL-RDLVEEELVNPTFIIDHPVVISPLAKRHRE 389

Query: 925  VPGLTERFELFVMKKELCNAYTELNDPIVQRERFEQQAKDKAAGDEEAMFVDETFLEAME 1104
             P LTERFEL +  +E+ NA++ELNDP+ Q +RF +QAK +  GDEEA  +D  F+ A+E
Sbjct: 390  DPRLTERFELIIFGREIANAFSELNDPVDQYQRFLEQAKMREEGDEEAHMMDLDFVRALE 449

Query: 1105 LGMPPTAGWGLGIDRLTMFLTDTDNIKEVLCFPAMKPE 1218
             GMPPT G G+G+DRL MF+TD+  I++V+ FP +KP+
Sbjct: 450  YGMPPTGGLGIGLDRLFMFITDSPTIRDVIPFPIVKPK 487

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,382,323
Number of Sequences: 369166
Number of extensions: 3504792
Number of successful extensions: 10415
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9991
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 14718776750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00026

  1. Dr_sW_001_K17
  2. Dr_sW_016_B04
  3. Dr_sW_004_P07
  4. Dr_sW_011_K03
  5. Dr_sW_003_G06
  6. Dr_sW_007_H14