DrC_00913
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00913 (1700 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q96474|ALB1_LUPAN Albumin 1 precursor (A1) [Contains: Al... 32 4.3 sp|Q03924|ZN117_HUMAN Zinc finger protein 117 (Zinc finger ... 32 5.6 sp|P47926|RSI1_LYCES RSI-1 protein precursor (TR132) 32 7.3 sp|P67414|URK_STRR6 Uridine kinase (Uridine monophosphokina... 32 7.3 sp|Q9CF21|URK_LACLA Uridine kinase (Uridine monophosphokina... 32 7.3
>sp|Q96474|ALB1_LUPAN Albumin 1 precursor (A1) [Contains: Albumin 1 chain b (A1b) (Leginsulin); Albumin 1 chain a (A1a)] Length = 81 Score = 32.3 bits (72), Expect = 4.3 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +3 Query: 60 TDECKCGKDQVIVGNCNQITKMITVT----HYSFVRQPNGKCLKKVKRTYRPCLTCPSNH 227 + +C+C +IVG C T + +V + + Q + +C+KK + C P+N+ Sbjct: 6 SSDCRCVPITLIVGFCIHPTGLSSVAKMIDEHPNLCQSDDECMKKGSGNF--CARYPNNY 63 Query: 228 VKYGRC 245 + YG C Sbjct: 64 IDYGWC 69
>sp|Q03924|ZN117_HUMAN Zinc finger protein 117 (Zinc finger protein HPF9) Length = 418 Score = 32.0 bits (71), Expect = 5.6 Identities = 21/81 (25%), Positives = 34/81 (41%) Frame = +3 Query: 303 KCVRRSNTRYENCQKCPKNIRKKRFCTANKYLRTTVYFNRLVGCFRCVSDQKTSTKEIKC 482 K + RYE C++C K + T +KY+ T +L C C S+ K Sbjct: 275 KLIHTGEKRYE-CEECGKAFNRSSKLTEHKYIHTG---EKLYKCEECDKAFNLSSTLTKH 330 Query: 483 KTRKVVKRINKTTECKTIYKR 545 K +++ K EC +K+ Sbjct: 331 KVIHTGEKLYKCKECGKAFKQ 351
>sp|P47926|RSI1_LYCES RSI-1 protein precursor (TR132) Length = 96 Score = 31.6 bits (70), Expect = 7.3 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = +3 Query: 723 CPKNTVTKLCIPRQGTVRIVHKIYRVNKKSCRCYASFRTRYKQIRCP 863 C K T LC+P+ +Y NK+SC CY +++T+ + +CP Sbjct: 59 CQKCCATCLCVPKG--------VYG-NKQSCPCYNNWKTQEGKPKCP 96
>sp|P67414|URK_STRR6 Uridine kinase (Uridine monophosphokinase) (Cytidine monophosphokinase) sp|P67413|URK_STRPN Uridine kinase (Uridine monophosphokinase) (Cytidine monophosphokinase) Length = 212 Score = 31.6 bits (70), Expect = 7.3 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = +1 Query: 241 DAIFVLENGELHDIFMLLLD*NVFVDLTLDMKIVRNVQKTLEKK 372 + I VLE+ L D L+D +FVD D++I+R +++ +E++ Sbjct: 111 EGILVLEDKRLRD----LMDIKIFVDTDDDVRIIRRIKRDMEER 150
>sp|Q9CF21|URK_LACLA Uridine kinase (Uridine monophosphokinase) (Cytidine monophosphokinase) Length = 206 Score = 31.6 bits (70), Expect = 7.3 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = +1 Query: 241 DAIFVLENGELHDIFMLLLD*NVFVDLTLDMKIVRNVQKTLEKK 372 + I VLE+ L D L+D +FVD D++I+R +++ +E++ Sbjct: 110 EGILVLEDERLRD----LMDIKIFVDTDDDVRIIRRIRRDIEER 149
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,856,194
Number of Sequences: 369166
Number of extensions: 2316975
Number of successful extensions: 6640
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6633
length of database: 68,354,980
effective HSP length: 116
effective length of database: 46,925,720
effective search space used: 21116574000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
