Planaria EST Database

DrC_00884

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00884
         (704 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7SXA5|FRIL_XENLA  Ferritin light chain, oocyte isoform (...    67   6e-11
sp|P42577|FRIS_LYMST  Soma ferritin                                63   7e-10
sp|P07798|FRI2_RANCA  Ferritin, middle subunit (Ferritin M) ...    61   3e-09
sp|P19132|FRIH_RAT  Ferritin heavy chain (Ferritin H subunit)      61   3e-09
sp|P29389|FRIH_CRIGR  Ferritin heavy chain (Ferritin H subunit)    60   4e-09
sp|P49948|FRIH2_XENLA  Ferritin heavy chain 2 (XL2-17)             60   6e-09
sp|P09528|FRIH_MOUSE  Ferritin heavy chain (Ferritin H subunit)    60   6e-09
sp|P17663|FRIH1_XENLA  Ferritin heavy chain 1                      59   2e-08
sp|P07229|FRI1_RANCA  Ferritin, higher subunit (Ferritin H)        59   2e-08
sp|P25915|FRIH_RABIT  Ferritin heavy chain (Ferritin H subunit)    57   6e-08

>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
          Length = 177

 Score = 66.6 bits (161), Expect = 6e-11
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
 Frame = +1

Query: 58  SKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 237
           +++ N  LQ    Y  V      D++ L  F + F  + + +  + E+ ++FQ  RG +V
Sbjct: 20  NRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRV 79

Query: 238 TWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVIL 417
              DVK  +   E G   +  +  LN EK ++Q  L L K+A +  D  +  +LE   + 
Sbjct: 80  VLQDVKKPDDD-EWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLE 138

Query: 418 RQTKVIRKRANQLRDLKR---SEDDMTPFLTSKL 510
            + K+I+K  + L +L+R   +E+ M  +L  KL
Sbjct: 139 EEVKLIKKLGDHLTNLRRVKAAEEGMGEYLFDKL 172

>sp|P42577|FRIS_LYMST Soma ferritin
          Length = 174

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 40/150 (26%), Positives = 74/150 (49%)
 Frame = +1

Query: 58  SKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 237
           ++ IN  L     Y+ +      D++ L  F + F+   + E  + E+L+++Q  RG ++
Sbjct: 19  NRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRI 78

Query: 238 TWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVIL 417
              D+K  ++  E G  +E  Q  L  EK V+Q  L L KL    +D  ++ FLE   + 
Sbjct: 79  VLQDIKKPDRD-EWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLE 137

Query: 418 RQTKVIRKRANQLRDLKRSEDDMTPFLTSK 507
            Q K I++ ++ + +LKR    +  ++  K
Sbjct: 138 EQVKSIKELSDYITNLKRVGPGLGEYIFDK 167

>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
          Length = 176

 Score = 61.2 bits (147), Expect = 3e-09
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
 Frame = +1

Query: 67  INRML--QLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           +NRML  +L   Y    M      D++ L +    F+     E  + E+ +++Q  RG +
Sbjct: 17  VNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGR 76

Query: 235 VTWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 414
           V   D+K  E+  E G  +E  Q  L  EK V+Q  L L KLA +K D  L  FLE   +
Sbjct: 77  VVLQDIKKPERD-EWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYL 135

Query: 415 LRQTKVIRKRANQLRDLKR---SEDDMTPFLTSK 507
             Q K I++  + + +LKR    E+ M  +L  K
Sbjct: 136 EEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169

>sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit)
          Length = 182

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
 Frame = +1

Query: 67  INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           INR   L+L   Y  + M C    D++ L +F + F      E  + E+L++ Q  RG +
Sbjct: 21  INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80

Query: 235 VTWYDVK-PVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 411
           +   D+K P     ESG  +   +  L+ EK V+Q  L L KLA +KND  L  F+E   
Sbjct: 81  IFLQDIKKPDRDDWESG--LNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHY 138

Query: 412 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLTSK 507
           +  Q K I++  + + +L++    E  M  +L  K
Sbjct: 139 LNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDK 173

>sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit)
          Length = 186

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
 Frame = +1

Query: 67  INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           INR   L+L   Y  + M C    D++ L +F + F      E  + E+L++ Q  RG +
Sbjct: 26  INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 85

Query: 235 VTWYDVK-PVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 411
           +   D+K P     ESG  +   +  L+ EK V+Q  L L KLA +KND  L  F+E   
Sbjct: 86  IFLQDIKKPDRDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHY 143

Query: 412 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLTSK 507
           +  Q K I++  + + +L++    E  M  +L  K
Sbjct: 144 LNEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 178

>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
          Length = 176

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 39/138 (28%), Positives = 67/138 (48%)
 Frame = +1

Query: 58  SKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKV 237
           ++++N  +     Y  +      D++ L    + F+     E  + E+ +++Q  RG +V
Sbjct: 18  NRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRV 77

Query: 238 TWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVIL 417
              D+K  E+  E G  +E  Q  L  EK V+Q  L L KLA +K D  L  FLE   + 
Sbjct: 78  VLQDIKKPERD-EWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLE 136

Query: 418 RQTKVIRKRANQLRDLKR 471
            Q K +++  + + +LKR
Sbjct: 137 EQVKAMKQLGDYITNLKR 154

>sp|P09528|FRIH_MOUSE Ferritin heavy chain (Ferritin H subunit)
          Length = 182

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
 Frame = +1

Query: 67  INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           INR   L+L   Y  + M C    D++ L +F + F      E  + E+L++ Q  RG +
Sbjct: 21  INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80

Query: 235 VTWYDVK-PVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 411
           +   D+K P     ESG  +   +  L+ EK V+Q  L L KLA +KND  L  F+E   
Sbjct: 81  IFLQDIKKPDRDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYY 138

Query: 412 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLTSK 507
           +  Q K I++  + + +L++    E  M  +L  K
Sbjct: 139 LSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 173

>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
          Length = 176

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
 Frame = +1

Query: 67  INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           INRM  L++   Y  + M      D++ L    + F+     E  + E+ +++Q  RG +
Sbjct: 17  INRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGR 76

Query: 235 VTWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 414
           V   D+K  E+  E    +E  Q  L  EK V+Q  L L KLA +K D  L  FLE   +
Sbjct: 77  VVLQDIKKPERD-EWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYL 135

Query: 415 LRQTKVIRKRANQLRDLKR 471
             Q K +++  + + +LKR
Sbjct: 136 EEQVKAMKELGDYITNLKR 154

>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
          Length = 176

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
 Frame = +1

Query: 67  INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 234
           INRM  ++L   Y  + M      D++ L +  + F+     E  + E+L++ Q  RG +
Sbjct: 17  INRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGR 76

Query: 235 VTWYDVKPVEQHIESGKPVEIFQTILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 414
           +   DVK  E+  E G  +E  Q  L  EK V+Q  L L K+  +K D  L  FLE   +
Sbjct: 77  IVLQDVKKPERD-EWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYL 135

Query: 415 LRQTKVIRKRANQLRDLKR 471
             Q K I++  + + +LKR
Sbjct: 136 EEQVKSIKQLGDYITNLKR 154

>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
          Length = 164

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
 Frame = +1

Query: 127 DELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQKVTWYDVK-PVEQHIESGKPVEIFQ 303
           D++ L +F + F      E  + E+L++ Q  RG ++   D+K P     ESG  +   +
Sbjct: 26  DDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKPEYDDWESG--LNAME 83

Query: 304 TILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVILRQTKVIRKRANQLRDLKR---S 474
             L+ EK V+Q  L L KLA +KND  L  F+E   +  Q K I++  + + +L++    
Sbjct: 84  CALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAP 143

Query: 475 EDDMTPFLTSK 507
           E  M  +L  K
Sbjct: 144 ESGMAEYLFDK 154

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,704,905
Number of Sequences: 369166
Number of extensions: 1111273
Number of successful extensions: 3107
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3107
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6170718545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00884

  1. Dr_sW_022_E07
  2. Dr_sW_006_A19
  3. Dr_sW_021_N07
  4. Dr_sW_023_O24
  5. Dr_sW_010_A15
  6. Dr_sW_020_F05