Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_A19
(509 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 67 2e-11
sp|P42577|FRIS_LYMST Soma ferritin 64 3e-10
sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17) 62 1e-09
sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) ... 62 1e-09
sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit) 61 2e-09
sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit) 60 2e-09
sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H) 60 3e-09
sp|P09528|FRIH_MOUSE Ferritin heavy chain (Ferritin H subunit) 60 3e-09
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 59 5e-09
sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit) 58 1e-08
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 67.4 bits (163), Expect = 2e-11
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
V+++ N LQ Y V D++ L F + F + + + + E+ ++FQ RG +
Sbjct: 19 VNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGR 78
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
V DVK + E G + + LN EK ++Q L L K+A + D + +LE +
Sbjct: 79 VVLQDVKKPDDD-EWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFL 137
Query: 361 LRQTKVIRKRANQLRDLKR---SEDDMTPFLASKL 456
+ K+I+K + L +L+R +E+ M +L KL
Sbjct: 138 EEEVKLIKKLGDHLTNLRRVKAAEEGMGEYLFDKL 172
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 63.5 bits (153), Expect = 3e-10
Identities = 40/151 (26%), Positives = 75/151 (49%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+++ IN L Y+ + D++ L F + F+ + E + E+L+++Q RG +
Sbjct: 18 INRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGR 77
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
+ D+K ++ E G +E Q L EK V+Q L L KL +D ++ FLE +
Sbjct: 78 IVLQDIKKPDRD-EWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFL 136
Query: 361 LRQTKVIRKRANQLRDLKRSEDDMTPFLASK 453
Q K I++ ++ + +LKR + ++ K
Sbjct: 137 EEQVKSIKELSDYITNLKRVGPGLGEYIFDK 167
>sp|P49948|FRIH2_XENLA Ferritin heavy chain 2 (XL2-17)
Length = 176
Score = 61.6 bits (148), Expect = 1e-09
Identities = 39/139 (28%), Positives = 69/139 (49%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+++++N + Y + D++ L + F+ E + E+ +++Q RG +
Sbjct: 17 INRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGR 76
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
V D+K E+ E G +E Q+ L EK V+Q L L KLA +K D L FLE +
Sbjct: 77 VVLQDIKKPERD-EWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYL 135
Query: 361 LRQTKVIRKRANQLRDLKR 417
Q K +++ + + +LKR
Sbjct: 136 EEQVKAMKQLGDYITNLKR 154
>sp|P07798|FRI2_RANCA Ferritin, middle subunit (Ferritin M) (Ferritin X) (Ferritin H')
Length = 176
Score = 61.6 bits (148), Expect = 1e-09
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Frame = +1
Query: 13 INRML--QLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+NRML +L Y M D++ L + F+ E + E+ +++Q RG +
Sbjct: 17 VNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGR 76
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
V D+K E+ E G +E Q+ L EK V+Q L L KLA +K D L FLE +
Sbjct: 77 VVLQDIKKPERD-EWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYL 135
Query: 361 LRQTKVIRKRANQLRDLKR---SEDDMTPFLASK 453
Q K I++ + + +LKR E+ M +L K
Sbjct: 136 EEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169
>sp|P19132|FRIH_RAT Ferritin heavy chain (Ferritin H subunit)
Length = 182
Score = 60.8 bits (146), Expect = 2e-09
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Frame = +1
Query: 13 INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
INR L+L Y + M C D++ L +F + F E + E+L++ Q RG +
Sbjct: 21 INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80
Query: 181 VTWYDVK-PVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 357
+ D+K P ESG + + L+ EK V+Q L L KLA +KND L F+E
Sbjct: 81 IFLQDIKKPDRDDWESG--LNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHY 138
Query: 358 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLASK 453
+ Q K I++ + + +L++ E M +L K
Sbjct: 139 LNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDK 173
>sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit)
Length = 186
Score = 60.5 bits (145), Expect = 2e-09
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Frame = +1
Query: 13 INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
INR L+L Y + M C D++ L +F + F E + E+L++ Q RG +
Sbjct: 26 INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 85
Query: 181 VTWYDVK-PVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 357
+ D+K P ESG + + L+ EK V+Q L L KLA +KND L F+E
Sbjct: 86 IFLQDIKKPDRDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHY 143
Query: 358 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLASK 453
+ Q K I++ + + +L++ E M +L K
Sbjct: 144 LNEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 178
>sp|P07229|FRI1_RANCA Ferritin, higher subunit (Ferritin H)
Length = 176
Score = 60.1 bits (144), Expect = 3e-09
Identities = 40/139 (28%), Positives = 69/139 (49%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+++++N L Y + D++ L + + F+ E + E+L++ Q RG +
Sbjct: 17 INRMVNMELYASYTYLSMAFYFDRDDIALHNVAKFFKEQSHEEREHAEKLMKDQNKRGGR 76
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
+ DVK E+ E G +E Q+ L EK V+Q L L K+ +K D L FLE +
Sbjct: 77 IVLQDVKKPERD-EWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYL 135
Query: 361 LRQTKVIRKRANQLRDLKR 417
Q K I++ + + +LKR
Sbjct: 136 EEQVKSIKQLGDYITNLKR 154
>sp|P09528|FRIH_MOUSE Ferritin heavy chain (Ferritin H subunit)
Length = 182
Score = 60.1 bits (144), Expect = 3e-09
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Frame = +1
Query: 13 INRM--LQLCQGYRQVEMRCL--TDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
INR L+L Y + M C D++ L +F + F E + E+L++ Q RG +
Sbjct: 21 INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80
Query: 181 VTWYDVK-PVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 357
+ D+K P ESG + + L+ EK V+Q L L KLA +KND L F+E
Sbjct: 81 IFLQDIKKPDRDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYY 138
Query: 358 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLASK 453
+ Q K I++ + + +L++ E M +L K
Sbjct: 139 LSEQVKSIKELGDHVTNLRKMGAPEAGMAEYLFDK 173
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 59.3 bits (142), Expect = 5e-09
Identities = 38/139 (27%), Positives = 68/139 (48%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+++++N + Y + D++ L + F+ E + E+ +++Q RG +
Sbjct: 17 INRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGR 76
Query: 181 VTWYDVKPVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRVI 360
V D+K E+ E +E Q+ L EK V+Q L L KLA +K D L FLE +
Sbjct: 77 VVLQDIKKPERD-EWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYL 135
Query: 361 LRQTKVIRKRANQLRDLKR 417
Q K +++ + + +LKR
Sbjct: 136 EEQVKAMKELGDYITNLKR 154
>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
Length = 164
Score = 57.8 bits (138), Expect = 1e-08
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Frame = +1
Query: 1 VSKLINRMLQLCQGYRQVEMRCLTDELNLMSFGRLFELIRQLEGRYTEELIRFQVNRGQK 180
+++ IN L Y + D++ L +F + F E + E+L++ Q RG +
Sbjct: 2 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 61
Query: 181 VTWYDVK-PVEQHIESGKPVEIFQSILNFEKDVHQLTLRLCKLAWEKNDLSLSSFLEDRV 357
+ D+K P ESG + + L+ EK V+Q L L KLA +KND L F+E
Sbjct: 62 IFLQDIKKPEYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHY 119
Query: 358 ILRQTKVIRKRANQLRDLKR---SEDDMTPFLASK 453
+ Q K I++ + + +L++ E M +L K
Sbjct: 120 LNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDK 154
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,708,363
Number of Sequences: 369166
Number of extensions: 881444
Number of successful extensions: 2691
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2691
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)