Planarian EST Database

DrC_00818

Cluster detail
GO Category :
Consensus Sequence :
>DrC_00818 TAATTTCCTTTGATTATGCAGGTTGCGAGAAGAATGTTTAGGCGAGCACCTCGAATTTCG AGTATAGGGTTGCTTAACAATTCATTAAATAAAATCAGAGTTTTACCAAATTTTGTAGAA AATAAACGAAATTATGCAACTGAAAGTGTCAAAAAGCCTGAGGTTTCTACGAAATCTAAT ATTGTTGGAAAAATTGTAGCAGTTATCGGGGCCGTTGTTGATGTGCATTTTGATGGTGAT TTACCTCCGATTCTTAATGCTTTAGAAGTGAAGGGCAGGACACCTCGATTAATTTTAGAA GTAGCTCAGCATTTAGGTGAGAGCACAGTGCGGACTATTGCTATGGATGGTACTGAGGGT TTGATTCGCGGTCAAGAATGTCTGGATGTTGGTTCTTCTATTAGAATTCCAGTTGGACCA GAAACTTTGGGTAGAATTATGAATGTAATCGGTGAGCCAATTGATGAAAGAGGCCCAATA AAGTCTAAAATGCAATCTTCTATTCATCAGGATGCTCCAGATTTTGTTGATATGAGCACG GAACAAGAAATTCTCGAAACTGGTATTAAAGTTGTAGATTTGTTAGCTCCTTATGCTAGG GGTGGTAAAATTGGATTATTTGGAGGTGCTGGTGTTGGCAAAACCGTATTGATTATGGAA TTAATTAATAACATTGCTAGAGCTCACGGTGGTTATTCTGTATTTGCTGGAGTTGGAGAA AGAACTCGAGAGGGCAATGATTTATATCATGAAATGATTACGACCGGTGTTATTGACTTG AAAGGAGATAAATCAAAAGTATCTTTAGTTTATGGTCAAATGAATGAACCTCCGGGAGCT AGGGCACGTGTAGCATTGACTGGATTAACTGTAGCTGAATATTTTCGTGATCAAGAGGGC CAGGATGTGCTATTGTTTATTGACAACATTTTCAGATTTACTCAGGCCGGTTCTGAAGTC TCAGCTTTACTAGGTCGAATTCCAAGTGCTGTTGGGTTATCAACCGACACTTGCAACTGA TATGGGTACTATGCAGGAAAGAATTACAACAACAAATAAAGGTTCTATTACATCTGTACA GGCTATTTATGTTCCAGCTGATGATTTGACTGACCCTGCTCCAGCCACAACTTTTGCTCA TCTTGATGCAACAACTGTCCTTAGTAGAGGTATTGCAGAATTGGGTATATATCCTGCAGT CGAT

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00818
         (1204 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10719|ATPB_RAT  ATP synthase beta chain, mitochondrial p...   445   e-124
sp|P00829|ATPB_BOVIN  ATP synthase beta chain, mitochondrial...   445   e-124
sp|P56480|ATPB_MOUSE  ATP synthase beta chain, mitochondrial...   444   e-124
sp|P06576|ATPB_HUMAN  ATP synthase beta chain, mitochondrial...   442   e-124
sp|Q25117|ATPB_HEMPU  ATP synthase beta chain, mitochondrial...   442   e-124
sp|Q9PTY0|ATPB_CYPCA  ATP synthase beta chain, mitochondrial...   441   e-123
sp|P46561|ATPB_CAEEL  ATP synthase beta chain, mitochondrial...   437   e-122
sp|Q05825|ATPB_DROME  ATP synthase beta chain, mitochondrial...   429   e-119
sp|P00830|ATPB_YEAST  ATP synthase beta chain, mitochondrial...   407   e-113
sp|P49376|ATPB_KLULA  ATP synthase beta chain, mitochondrial...   401   e-111

>sp|P10719|ATPB_RAT ATP synthase beta chain, mitochondrial precursor
          Length = 529

 Score =  445 bits (1145), Expect = e-124
 Identities = 233/309 (75%), Positives = 257/309 (83%), Gaps = 4/309 (1%)
 Frame = +1

Query: 94   IRVLPNFVENKRNYATESVKKPEVSTKSNXXXXXXXXXXXXXXXHFDGDLPPILNALEVK 273
            +R  P  V   R+YA +S   P+  T +                 FD  LPPILNALEV+
Sbjct: 33   LRTAPAGVHPARDYAAQSSAAPKAGTATGQIVAVIGAVVDV---QFDEGLPPILNALEVQ 89

Query: 274  GRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIG 453
            GR  RL+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIG
Sbjct: 90   GRESRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIG 149

Query: 454  EPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAG 633
            EPIDERGPIK+K  + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAG
Sbjct: 150  EPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAG 209

Query: 634  VGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVY 813
            VGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK   SKV+LVY
Sbjct: 210  VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVY 269

Query: 814  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 993
            GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV
Sbjct: 270  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 329

Query: 994  G----LSTD 1008
            G    L+TD
Sbjct: 330  GYQPTLATD 338


 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 329  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 388

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 389  IAELGIYPAVD 399

>sp|P00829|ATPB_BOVIN ATP synthase beta chain, mitochondrial precursor
          Length = 528

 Score =  445 bits (1144), Expect = e-124
 Identities = 232/309 (75%), Positives = 258/309 (83%), Gaps = 4/309 (1%)
 Frame = +1

Query: 94   IRVLPNFVENKRNYATESVKKPEVSTKSNXXXXXXXXXXXXXXXHFDGDLPPILNALEVK 273
            +R  P  ++  R+YA ++   P+    +                 FD  LPPILNALEV+
Sbjct: 33   LRAAPAALQPARDYAAQASPSPKAGATTGRIVAVIGAVVDV---QFDEGLPPILNALEVQ 89

Query: 274  GRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIG 453
            GR  RL+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ IRIPVGPETLGRIMNVIG
Sbjct: 90   GRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIG 149

Query: 454  EPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAG 633
            EPIDERGPIK+K  ++IH +AP+FV+MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAG
Sbjct: 150  EPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAG 209

Query: 634  VGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVY 813
            VGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK   SKV+LVY
Sbjct: 210  VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVY 269

Query: 814  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 993
            GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV
Sbjct: 270  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 329

Query: 994  G----LSTD 1008
            G    L+TD
Sbjct: 330  GYQPTLATD 338


 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 329  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 388

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 389  IAELGIYPAVD 399

>sp|P56480|ATPB_MOUSE ATP synthase beta chain, mitochondrial precursor
          Length = 529

 Score =  444 bits (1142), Expect = e-124
 Identities = 232/309 (75%), Positives = 257/309 (83%), Gaps = 4/309 (1%)
 Frame = +1

Query: 94   IRVLPNFVENKRNYATESVKKPEVSTKSNXXXXXXXXXXXXXXXHFDGDLPPILNALEVK 273
            +R  P  V   R+YA ++   P+  T +                 FD  LPPILNALEV+
Sbjct: 33   LRAAPAGVHPARDYAAQASAAPKAGTATGRIVAVIGAVVDV---QFDEGLPPILNALEVQ 89

Query: 274  GRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIG 453
            GR  RL+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIG
Sbjct: 90   GRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIG 149

Query: 454  EPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAG 633
            EPIDERGPIK+K  + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAG
Sbjct: 150  EPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAG 209

Query: 634  VGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVY 813
            VGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK   SKV+LVY
Sbjct: 210  VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVY 269

Query: 814  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 993
            GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV
Sbjct: 270  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 329

Query: 994  G----LSTD 1008
            G    L+TD
Sbjct: 330  GYQPTLATD 338


 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 329  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 388

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 389  IAELGIYPAVD 399

>sp|P06576|ATPB_HUMAN ATP synthase beta chain, mitochondrial precursor
          Length = 529

 Score =  442 bits (1138), Expect = e-124
 Identities = 231/309 (74%), Positives = 256/309 (82%), Gaps = 4/309 (1%)
 Frame = +1

Query: 94   IRVLPNFVENKRNYATESVKKPEVSTKSNXXXXXXXXXXXXXXXHFDGDLPPILNALEVK 273
            +R  P  V   R+YA ++   P+    +                 FD  LPPILNALEV+
Sbjct: 33   LRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDV---QFDEGLPPILNALEVQ 89

Query: 274  GRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIG 453
            GR  RL+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIG
Sbjct: 90   GRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIG 149

Query: 454  EPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAG 633
            EPIDERGPIK+K  + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAG
Sbjct: 150  EPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAG 209

Query: 634  VGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVY 813
            VGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK   SKV+LVY
Sbjct: 210  VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVY 269

Query: 814  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 993
            GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV
Sbjct: 270  GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAV 329

Query: 994  G----LSTD 1008
            G    L+TD
Sbjct: 330  GYQPTLATD 338


 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 329  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 388

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 389  IAELGIYPAVD 399

>sp|Q25117|ATPB_HEMPU ATP synthase beta chain, mitochondrial precursor
          Length = 523

 Score =  442 bits (1138), Expect = e-124
 Identities = 225/264 (85%), Positives = 243/264 (92%), Gaps = 4/264 (1%)
 Frame = +1

Query: 229  FDGDLPPILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRI 408
            F+ DLPPILNALEV+GRT RL+LEVAQHLGE+TVRTIAMDGTEGLIRGQ+C+D GS I I
Sbjct: 70   FEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGSPISI 129

Query: 409  PVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLA 588
            PVGPETLGRI+NVIGEPIDERGPI +  +S+IH +AP+FV+MS  QEIL TGIKVVDLLA
Sbjct: 130  PVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLA 189

Query: 589  PYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTG 768
            PYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI  G
Sbjct: 190  PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGG 249

Query: 769  VIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 948
            VI LK D SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA
Sbjct: 250  VISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 309

Query: 949  GSEVSALLGRIPSAVG----LSTD 1008
            GSEVSALLGRIPSAVG    L+TD
Sbjct: 310  GSEVSALLGRIPSAVGYQPTLATD 333


 Score =  139 bits (351), Expect = 1e-32
 Identities = 69/71 (97%), Positives = 70/71 (98%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG
Sbjct: 324  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 383

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 384  IAELGIYPAVD 394

>sp|Q9PTY0|ATPB_CYPCA ATP synthase beta chain, mitochondrial precursor
          Length = 518

 Score =  441 bits (1135), Expect = e-123
 Identities = 225/264 (85%), Positives = 241/264 (91%), Gaps = 4/264 (1%)
 Frame = +1

Query: 229  FDGDLPPILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRI 408
            FD DLPPILNALEV GR  RL+LEVAQHLGE+TVRTIAMDGTEGL+RGQ+ LD G+ IRI
Sbjct: 65   FDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRI 124

Query: 409  PVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLA 588
            PVGPETLGRIMNVIGEPIDERGPI +K  + IH +AP+F DMS EQEIL TGIKVVDLLA
Sbjct: 125  PVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIKVVDLLA 184

Query: 589  PYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTG 768
            PYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +G
Sbjct: 185  PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESG 244

Query: 769  VIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 948
            VI+LK   SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA
Sbjct: 245  VINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 304

Query: 949  GSEVSALLGRIPSAVG----LSTD 1008
            GSEVSALLGRIPSAVG    L+TD
Sbjct: 305  GSEVSALLGRIPSAVGYQPTLATD 328


 Score =  137 bits (345), Expect = 6e-32
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 319  VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 378

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 379  IAELGIYPAVD 389

>sp|P46561|ATPB_CAEEL ATP synthase beta chain, mitochondrial precursor
          Length = 538

 Score =  437 bits (1125), Expect = e-122
 Identities = 232/317 (73%), Positives = 254/317 (80%), Gaps = 12/317 (3%)
 Frame = +1

Query: 94   IRVLPNFVENKRNY--------ATESVKKPEVSTKSNXXXXXXXXXXXXXXXHFDGDLPP 249
            IR+  N VE+K+          A  + K    +T +N                FD +LPP
Sbjct: 31   IRLSSNNVESKKGIHTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQFDENLPP 90

Query: 250  ILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETL 429
            ILN LEV GR+PRLILEV+QHLG++ VR IAMDGTEGL+RGQ   D G  I+IPVGPETL
Sbjct: 91   ILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETL 150

Query: 430  GRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGK 609
            GRIMNVIGEPIDERGPI SK  ++IH +AP+FV+MS EQEIL TGIKVVDLLAPYA+GGK
Sbjct: 151  GRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGK 210

Query: 610  IGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGD 789
            IGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI  GVIDLKG 
Sbjct: 211  IGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGK 270

Query: 790  KSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSAL 969
             SKVSLVYGQMNEPPGARARV LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSAL
Sbjct: 271  NSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSAL 330

Query: 970  LGRIPSAVG----LSTD 1008
            LGRIPSAVG    L+TD
Sbjct: 331  LGRIPSAVGYQPTLATD 347


 Score =  135 bits (341), Expect = 2e-31
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG
Sbjct: 338  VGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 397

Query: 1172 IAELGIYPAVD 1204
            IAEL IYPAVD
Sbjct: 398  IAELAIYPAVD 408

>sp|Q05825|ATPB_DROME ATP synthase beta chain, mitochondrial precursor
          Length = 505

 Score =  429 bits (1102), Expect = e-119
 Identities = 220/264 (83%), Positives = 238/264 (90%), Gaps = 4/264 (1%)
 Frame = +1

Query: 229  FDGDLPPILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRI 408
            FD +LPPILNALEV  R+PRL+LEVAQHLGE+TVRTIAMDGTEGL+RGQ+ LD G  IRI
Sbjct: 52   FDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRI 111

Query: 409  PVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLA 588
            PVG ETLGRI+NVIGEPIDERGPI +   ++IH +AP+FV MS EQEIL TGIKVVDLLA
Sbjct: 112  PVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLA 171

Query: 589  PYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTG 768
            PYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLY+EMI  G
Sbjct: 172  PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGG 231

Query: 769  VIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 948
            VI LK   SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA
Sbjct: 232  VISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 291

Query: 949  GSEVSALLGRIPSAVG----LSTD 1008
            GSEVSALLGRIPSAVG    L+TD
Sbjct: 292  GSEVSALLGRIPSAVGYQPTLATD 315


 Score =  135 bits (341), Expect = 2e-31
 Identities = 67/71 (94%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR 
Sbjct: 306  VGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRA 365

Query: 1172 IAELGIYPAVD 1204
            IAELGIYPAVD
Sbjct: 366  IAELGIYPAVD 376

>sp|P00830|ATPB_YEAST ATP synthase beta chain, mitochondrial precursor
          Length = 511

 Score =  407 bits (1047), Expect = e-113
 Identities = 210/266 (78%), Positives = 234/266 (87%), Gaps = 5/266 (1%)
 Frame = +1

Query: 226  HFD-GDLPPILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSI 402
            HF+  +LP ILNALE+K    +L+LEVAQHLGE+TVRTIAMDGTEGL+RG++ LD G  I
Sbjct: 57   HFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPI 116

Query: 403  RIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDL 582
             +PVG ETLGRI+NVIGEPIDERGPIKSK++  IH D P F + ST  EILETGIKVVDL
Sbjct: 117  SVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDL 176

Query: 583  LAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMIT 762
            LAPYARGGKIGLFGGAGVGKTV I ELINNIA+AHGG+SVFAGVGERTREGNDLY EM  
Sbjct: 177  LAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAGVGERTREGNDLYREMKE 236

Query: 763  TGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFT 942
            TGVI+L+G+ SKV+LV+GQMNEPPGARARVALTGLT+AEYFRD+EGQDVLLFIDNIFRFT
Sbjct: 237  TGVINLEGE-SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFT 295

Query: 943  QAGSEVSALLGRIPSAVG----LSTD 1008
            QAGSEVSALLGRIPSAVG    L+TD
Sbjct: 296  QAGSEVSALLGRIPSAVGYQPTLATD 321


 Score =  127 bits (319), Expect = 6e-29
 Identities = 59/71 (83%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMG +QERITTT KGS+TSVQA+YVPADDLTDP+P+T+FAHLDA++VLSRG
Sbjct: 312  VGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPSPSTSFAHLDASSVLSRG 371

Query: 1172 IAELGIYPAVD 1204
            I+ELGIYPAVD
Sbjct: 372  ISELGIYPAVD 382

>sp|P49376|ATPB_KLULA ATP synthase beta chain, mitochondrial precursor
          Length = 505

 Score =  401 bits (1031), Expect = e-111
 Identities = 207/262 (79%), Positives = 228/262 (87%), Gaps = 4/262 (1%)
 Frame = +1

Query: 235  GDLPPILNALEVKGRTPRLILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPV 414
            G LP ILNALE+     +L+LEVAQHLGE+TVRTIAMDGTEGL+RG+   D G+ I +PV
Sbjct: 55   GQLPAILNALEIDTPEGKLVLEVAQHLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPV 114

Query: 415  GPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPY 594
            G ETLGRI+NVIGEPIDERGPI SKM+  IH D P FV+ ST  E+LETGIKVVDLLAPY
Sbjct: 115  GRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPY 174

Query: 595  ARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVI 774
            ARGGKIGLFGGAGVGKTV I ELINNIA+AHGG+SVF GVGERTREGNDLY EM  TGVI
Sbjct: 175  ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVI 234

Query: 775  DLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGS 954
            +L+GD SKV+LV+GQMNEPPGARARVALTGLT+AEYFRD+EGQDVLLFIDNIFRFTQAGS
Sbjct: 235  NLEGD-SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 293

Query: 955  EVSALLGRIPSAVG----LSTD 1008
            EVSALLGRIPSAVG    L+TD
Sbjct: 294  EVSALLGRIPSAVGYQPTLATD 315


 Score =  134 bits (337), Expect = 5e-31
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +2

Query: 992  LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRG 1171
            +GYQPTLATDMG +QERITTT KGS+TSVQA+YVPADDLTDPAPATTFAHLDATTVLSRG
Sbjct: 306  VGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRG 365

Query: 1172 IAELGIYPAVD 1204
            I+ELGIYPAVD
Sbjct: 366  ISELGIYPAVD 376

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,554,772
Number of Sequences: 369166
Number of extensions: 2517979
Number of successful extensions: 8088
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7655
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13626738475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00818

Planaria EST Database

DrC_00818

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail