Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_F21
(915 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00829|ATPB_BOVIN ATP synthase beta chain, mitochondrial... 543 e-154
sp|Q25117|ATPB_HEMPU ATP synthase beta chain, mitochondrial... 543 e-154
sp|P56480|ATPB_MOUSE ATP synthase beta chain, mitochondrial... 541 e-153
sp|P10719|ATPB_RAT ATP synthase beta chain, mitochondrial p... 541 e-153
sp|Q9PTY0|ATPB_CYPCA ATP synthase beta chain, mitochondrial... 541 e-153
sp|P06576|ATPB_HUMAN ATP synthase beta chain, mitochondrial... 540 e-153
sp|P46561|ATPB_CAEEL ATP synthase beta chain, mitochondrial... 533 e-151
sp|Q05825|ATPB_DROME ATP synthase beta chain, mitochondrial... 527 e-149
sp|P49376|ATPB_KLULA ATP synthase beta chain, mitochondrial... 513 e-145
sp|P00830|ATPB_YEAST ATP synthase beta chain, mitochondrial... 509 e-144
>sp|P00829|ATPB_BOVIN ATP synthase beta chain, mitochondrial precursor
Length = 528
Score = 543 bits (1400), Expect = e-154
Identities = 275/305 (90%), Positives = 291/305 (95%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ IRIPVGPETLGRIMNVIGEPIDE
Sbjct: 95 LVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDE 154
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPIK+K ++IH +AP+FV+MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 155 RGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK SKV+LVYGQMNE
Sbjct: 215 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNE 274
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 275 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 334
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 335 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 394
Query: 901 YPAVD 915
YPAVD
Sbjct: 395 YPAVD 399
>sp|Q25117|ATPB_HEMPU ATP synthase beta chain, mitochondrial precursor
Length = 523
Score = 543 bits (1398), Expect = e-154
Identities = 274/305 (89%), Positives = 289/305 (94%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGE+TVRTIAMDGTEGLIRGQ+C+D GS I IPVGPETLGRI+NVIGEPIDE
Sbjct: 90 LVLEVAQHLGENTVRTIAMDGTEGLIRGQKCVDTGSPISIPVGPETLGRIINVIGEPIDE 149
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPI + +S+IH +AP+FV+MS QEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 150 RGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 209
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI GVI LK D SKV+LVYGQMNE
Sbjct: 210 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVISLKDDTSKVALVYGQMNE 269
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 270 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 329
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI
Sbjct: 330 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 389
Query: 901 YPAVD 915
YPAVD
Sbjct: 390 YPAVD 394
>sp|P56480|ATPB_MOUSE ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 541 bits (1394), Expect = e-153
Identities = 273/305 (89%), Positives = 290/305 (95%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIGEPIDE
Sbjct: 95 LVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDE 154
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPIK+K + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 155 RGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK SKV+LVYGQMNE
Sbjct: 215 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNE 274
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 275 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 334
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 335 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 394
Query: 901 YPAVD 915
YPAVD
Sbjct: 395 YPAVD 399
>sp|P10719|ATPB_RAT ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 541 bits (1394), Expect = e-153
Identities = 273/305 (89%), Positives = 290/305 (95%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIGEPIDE
Sbjct: 95 LVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDE 154
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPIK+K + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 155 RGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK SKV+LVYGQMNE
Sbjct: 215 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNE 274
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 275 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 334
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 335 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 394
Query: 901 YPAVD 915
YPAVD
Sbjct: 395 YPAVD 399
>sp|Q9PTY0|ATPB_CYPCA ATP synthase beta chain, mitochondrial precursor
Length = 518
Score = 541 bits (1394), Expect = e-153
Identities = 273/305 (89%), Positives = 288/305 (94%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGE+TVRTIAMDGTEGL+RGQ+ LD G+ IRIPVGPETLGRIMNVIGEPIDE
Sbjct: 85 LVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGAPIRIPVGPETLGRIMNVIGEPIDE 144
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPI +K + IH +AP+F DMS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 145 RGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 204
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK SKV+LVYGQMNE
Sbjct: 205 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDTTSKVALVYGQMNE 264
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 265 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 324
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 325 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 384
Query: 901 YPAVD 915
YPAVD
Sbjct: 385 YPAVD 389
>sp|P06576|ATPB_HUMAN ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 540 bits (1392), Expect = e-153
Identities = 273/305 (89%), Positives = 290/305 (95%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGESTVRTIAMDGTEGL+RGQ+ LD G+ I+IPVGPETLGRIMNVIGEPIDE
Sbjct: 95 LVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDE 154
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPIK+K + IH +AP+F++MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 155 RGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 214
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI +GVI+LK SKV+LVYGQMNE
Sbjct: 215 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNE 274
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 275 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 334
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 335 LATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 394
Query: 901 YPAVD 915
YPAVD
Sbjct: 395 YPAVD 399
>sp|P46561|ATPB_CAEEL ATP synthase beta chain, mitochondrial precursor
Length = 538
Score = 533 bits (1373), Expect = e-151
Identities = 270/305 (88%), Positives = 284/305 (93%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
LILEV+QHLG++ VR IAMDGTEGL+RGQ D G I+IPVGPETLGRIMNVIGEPIDE
Sbjct: 104 LILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDE 163
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPI SK ++IH +AP+FV+MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 164 RGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 223
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLYHEMI GVIDLKG SKVSLVYGQMNE
Sbjct: 224 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNE 283
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARV LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 284 PPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 343
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAEL I
Sbjct: 344 LATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAI 403
Query: 901 YPAVD 915
YPAVD
Sbjct: 404 YPAVD 408
>sp|Q05825|ATPB_DROME ATP synthase beta chain, mitochondrial precursor
Length = 505
Score = 527 bits (1357), Expect = e-149
Identities = 268/305 (87%), Positives = 284/305 (93%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGE+TVRTIAMDGTEGL+RGQ+ LD G IRIPVG ETLGRI+NVIGEPIDE
Sbjct: 72 LVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDE 131
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPI + ++IH +AP+FV MS EQEIL TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV
Sbjct: 132 RGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTV 191
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
LIMELINN+A+AHGGYSVFAGVGERTREGNDLY+EMI GVI LK SKV+LVYGQMNE
Sbjct: 192 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNE 251
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 252 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 311
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR IAELGI
Sbjct: 312 LATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGI 371
Query: 901 YPAVD 915
YPAVD
Sbjct: 372 YPAVD 376
>sp|P49376|ATPB_KLULA ATP synthase beta chain, mitochondrial precursor
Length = 505
Score = 513 bits (1320), Expect = e-145
Identities = 258/305 (84%), Positives = 280/305 (91%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGE+TVRTIAMDGTEGL+RG+ D G+ I +PVG ETLGRI+NVIGEPIDE
Sbjct: 73 LVLEVAQHLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDE 132
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPI SKM+ IH D P FV+ ST E+LETGIKVVDLLAPYARGGKIGLFGGAGVGKTV
Sbjct: 133 RGPINSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 192
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
I ELINNIA+AHGG+SVF GVGERTREGNDLY EM TGVI+L+GD SKV+LV+GQMNE
Sbjct: 193 FIQELINNIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINLEGD-SKVALVFGQMNE 251
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLT+AEYFRD+EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 252 PPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 311
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMG +QERITTT KGS+TSVQA+YVPADDLTDPAPATTFAHLDATTVLSRGI+ELGI
Sbjct: 312 LATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGI 371
Query: 901 YPAVD 915
YPAVD
Sbjct: 372 YPAVD 376
>sp|P00830|ATPB_YEAST ATP synthase beta chain, mitochondrial precursor
Length = 511
Score = 509 bits (1312), Expect = e-144
Identities = 254/305 (83%), Positives = 282/305 (92%)
Frame = +1
Query: 1 LILEVAQHLGESTVRTIAMDGTEGLIRGQECLDVGSSIRIPVGPETLGRIMNVIGEPIDE 180
L+LEVAQHLGE+TVRTIAMDGTEGL+RG++ LD G I +PVG ETLGRI+NVIGEPIDE
Sbjct: 79 LVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDE 138
Query: 181 RGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 360
RGPIKSK++ IH D P F + ST EILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV
Sbjct: 139 RGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARGGKIGLFGGAGVGKTV 198
Query: 361 LIMELINNIARAHGGYSVFAGVGERTREGNDLYHEMITTGVIDLKGDKSKVSLVYGQMNE 540
I ELINNIA+AHGG+SVFAGVGERTREGNDLY EM TGVI+L+G+ SKV+LV+GQMNE
Sbjct: 199 FIQELINNIAKAHGGFSVFAGVGERTREGNDLYREMKETGVINLEGE-SKVALVFGQMNE 257
Query: 541 PPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 720
PPGARARVALTGLT+AEYFRD+EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT
Sbjct: 258 PPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT 317
Query: 721 LATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGI 900
LATDMG +QERITTT KGS+TSVQA+YVPADDLTDP+P+T+FAHLDA++VLSRGI+ELGI
Sbjct: 318 LATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPSPSTSFAHLDASSVLSRGISELGI 377
Query: 901 YPAVD 915
YPAVD
Sbjct: 378 YPAVD 382
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.137 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,470,727
Number of Sequences: 369166
Number of extensions: 1944775
Number of successful extensions: 7004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6413
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)