Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_B02
(745 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46561|ATPB_CAEEL ATP synthase beta chain, mitochondrial... 357 1e-98
sp|P00829|ATPB_BOVIN ATP synthase beta chain, mitochondrial... 357 2e-98
sp|Q9PTY0|ATPB_CYPCA ATP synthase beta chain, mitochondrial... 355 7e-98
sp|P56480|ATPB_MOUSE ATP synthase beta chain, mitochondrial... 355 9e-98
sp|P10719|ATPB_RAT ATP synthase beta chain, mitochondrial p... 355 9e-98
sp|P06576|ATPB_HUMAN ATP synthase beta chain, mitochondrial... 354 2e-97
sp|Q25117|ATPB_HEMPU ATP synthase beta chain, mitochondrial... 351 1e-96
sp|Q05825|ATPB_DROME ATP synthase beta chain, mitochondrial... 342 5e-94
sp|P00830|ATPB_YEAST ATP synthase beta chain, mitochondrial... 335 1e-91
sp|P49376|ATPB_KLULA ATP synthase beta chain, mitochondrial... 333 2e-91
>sp|P46561|ATPB_CAEEL ATP synthase beta chain, mitochondrial precursor
Length = 538
Score = 357 bits (917), Expect = 1e-98
Identities = 183/210 (87%), Positives = 193/210 (91%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G I+IPVGPETLGRIMNVIGEPIDERGPI SK ++IH +AP+FV+MS EQEIL TGIK
Sbjct: 138 GDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIK 197
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 198 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 257
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI GVIDLKG SKVSLVYGQMNEPPGARARV LTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 258 EMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNI 317
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 318 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 347
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 338 VGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 384
>sp|P00829|ATPB_BOVIN ATP synthase beta chain, mitochondrial precursor
Length = 528
Score = 357 bits (916), Expect = 2e-98
Identities = 182/210 (86%), Positives = 196/210 (93%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ IRIPVGPETLGRIMNVIGEPIDERGPIK+K ++IH +AP+FV+MS EQEIL TGIK
Sbjct: 129 GAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIK 188
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 189 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 248
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI +GVI+LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 338
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 375
>sp|Q9PTY0|ATPB_CYPCA ATP synthase beta chain, mitochondrial precursor
Length = 518
Score = 355 bits (911), Expect = 7e-98
Identities = 181/210 (86%), Positives = 193/210 (91%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ IRIPVGPETLGRIMNVIGEPIDERGPI +K + IH +AP+F DMS EQEIL TGIK
Sbjct: 119 GAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTGIK 178
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 179 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 238
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI +GVI+LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 239 EMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 298
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 299 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 328
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 319 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 365
>sp|P56480|ATPB_MOUSE ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 355 bits (910), Expect = 9e-98
Identities = 180/210 (85%), Positives = 195/210 (92%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ I+IPVGPETLGRIMNVIGEPIDERGPIK+K + IH +AP+F++MS EQEIL TGIK
Sbjct: 129 GAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIK 188
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 189 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 248
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI +GVI+LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 338
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 375
>sp|P10719|ATPB_RAT ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 355 bits (910), Expect = 9e-98
Identities = 180/210 (85%), Positives = 195/210 (92%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ I+IPVGPETLGRIMNVIGEPIDERGPIK+K + IH +AP+F++MS EQEIL TGIK
Sbjct: 129 GAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIK 188
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 189 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 248
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI +GVI+LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 338
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 375
>sp|P06576|ATPB_HUMAN ATP synthase beta chain, mitochondrial precursor
Length = 529
Score = 354 bits (908), Expect = 2e-97
Identities = 180/210 (85%), Positives = 195/210 (92%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ I+IPVGPETLGRIMNVIGEPIDERGPIK+K + IH +AP+F++MS EQEIL TGIK
Sbjct: 129 GAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIK 188
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 189 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 248
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI +GVI+LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 338
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 329 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 375
>sp|Q25117|ATPB_HEMPU ATP synthase beta chain, mitochondrial precursor
Length = 523
Score = 351 bits (901), Expect = 1e-96
Identities = 180/210 (85%), Positives = 192/210 (91%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
GS I IPVGPETLGRI+NVIGEPIDERGPI + +S+IH +AP+FV+MS QEIL TGIK
Sbjct: 124 GSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVTGIK 183
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLYH
Sbjct: 184 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYH 243
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI GVI LK D SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 244 EMIEGGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 303
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 304 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 333
Score = 93.6 bits (231), Expect = 5e-19
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMGTMQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 324 VGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 370
>sp|Q05825|ATPB_DROME ATP synthase beta chain, mitochondrial precursor
Length = 505
Score = 342 bits (878), Expect = 5e-94
Identities = 177/210 (84%), Positives = 189/210 (90%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G IRIPVG ETLGRI+NVIGEPIDERGPI + ++IH +AP+FV MS EQEIL TGIK
Sbjct: 106 GYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVEQEILVTGIK 165
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINN+A+AHGGYSVFAGVGERTREGNDLY+
Sbjct: 166 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYN 225
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EMI GVI LK SKV+LVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI
Sbjct: 226 EMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 285
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 286 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 315
Score = 92.0 bits (227), Expect = 1e-18
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMG+MQERITTT KGSITSVQAIYVPADDLTDPAPATT
Sbjct: 306 VGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDPAPATT 352
>sp|P00830|ATPB_YEAST ATP synthase beta chain, mitochondrial precursor
Length = 511
Score = 335 bits (858), Expect = 1e-91
Identities = 172/210 (81%), Positives = 187/210 (89%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G I +PVG ETLGRI+NVIGEPIDERGPIKSK++ IH D P F + ST EILETGIK
Sbjct: 113 GGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIK 172
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYARGGKIGLFGGAGVGKTV I ELINNIA+AHGG+SVFAGVGERTREGNDLY
Sbjct: 173 VVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAGVGERTREGNDLYR 232
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EM TGVI+L+G+ SKV+LV+GQMNEPPGARARVALTGLT+AEYFRD+EGQDVLLFIDNI
Sbjct: 233 EMKETGVINLEGE-SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNI 291
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 292 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 321
Score = 85.5 bits (210), Expect = 1e-16
Identities = 38/47 (80%), Positives = 45/47 (95%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMG +QERITTT KGS+TSVQA+YVPADDLTDP+P+T+
Sbjct: 312 VGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPSPSTS 358
>sp|P49376|ATPB_KLULA ATP synthase beta chain, mitochondrial precursor
Length = 505
Score = 333 bits (855), Expect = 2e-91
Identities = 172/210 (81%), Positives = 187/210 (89%), Gaps = 4/210 (1%)
Frame = +3
Query: 3 GSSIRIPVGPETLGRIMNVIGEPIDERGPIKSKMQSSIHQDAPDFVDMSTEQEILETGIK 182
G+ I +PVG ETLGRI+NVIGEPIDERGPI SKM+ IH D P FV+ ST E+LETGIK
Sbjct: 107 GAPISVPVGRETLGRIINVIGEPIDERGPINSKMRKPIHADPPLFVEQSTAAEVLETGIK 166
Query: 183 VVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAGVGERTREGNDLYH 362
VVDLLAPYARGGKIGLFGGAGVGKTV I ELINNIA+AHGG+SVF GVGERTREGNDLY
Sbjct: 167 VVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDLYR 226
Query: 363 EMITTGVIDLKGDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 542
EM TGVI+L+GD SKV+LV+GQMNEPPGARARVALTGLT+AEYFRD+EGQDVLLFIDNI
Sbjct: 227 EMKETGVINLEGD-SKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNI 285
Query: 543 FRFTQAGSEVSALLGRIPSAVG----LSTD 620
FRFTQAGSEVSALLGRIPSAVG L+TD
Sbjct: 286 FRFTQAGSEVSALLGRIPSAVGYQPTLATD 315
Score = 89.4 bits (220), Expect = 9e-18
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +1
Query: 604 LGYQPTLATDMGTMQERITTTNKGSITSVQAIYVPADDLTDPAPATT 744
+GYQPTLATDMG +QERITTT KGS+TSVQA+YVPADDLTDPAPATT
Sbjct: 306 VGYQPTLATDMGLLQERITTTKKGSVTSVQAVYVPADDLTDPAPATT 352
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,362,279
Number of Sequences: 369166
Number of extensions: 1554886
Number of successful extensions: 5859
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5461
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6728100400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)