DrC_00589
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00589 (527 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q14019|COTL1_HUMAN Coactosin-like protein 129 6e-30 sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein 126 3e-29 sp|P34121|COAC_DICDI Coactosin (Cytoskeletal p17 protein) (... 93 5e-19 sp|Q9P7E8|APP1_SCHPO Protein app1 51 2e-06 sp|Q62418|DBNL_MOUSE Drebrin-like protein (SH3 domain-conta... 49 1e-05 sp|Q9JHL4|DBNL_RAT Drebrin-like protein (SH3 domain-contain... 47 2e-05 sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein (SH3 domain-conta... 47 3e-05 sp|Q07266|DREB_RAT Drebrin (Developmentally regulated brain... 33 0.55 sp|Q16643|DREB_HUMAN Drebrin (Developmentally regulated bra... 33 0.55 sp|Q9QXS6|DREB_MOUSE Drebrin (Developmentally regulated bra... 33 0.55
>sp|Q14019|COTL1_HUMAN Coactosin-like protein Length = 142 Score = 129 bits (323), Expect = 6e-30 Identities = 66/137 (48%), Positives = 88/137 (64%) Frame = +1 Query: 16 MTSKIDKETISEAYEDVRNDATETTWALFGYDDKKIVVVKTGTLYESLLAEFNDDERHFA 195 M +KIDKE AY VR+D + W F YD IV + G Y+ + + DD R FA Sbjct: 1 MATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFA 60 Query: 196 FVRMITGDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEI 375 FVR TGD MSKR+KFALIT+ G NVS +++A DK+LVKEVV ++A + SD+ E+ Sbjct: 61 FVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKEL 120 Query: 376 TESKLRAALEKAGGANY 426 E +++ L+KAGGANY Sbjct: 121 EEDFIKSELKKAGGANY 137
>sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein Length = 142 Score = 126 bits (317), Expect = 3e-29 Identities = 66/137 (48%), Positives = 87/137 (63%) Frame = +1 Query: 16 MTSKIDKETISEAYEDVRNDATETTWALFGYDDKKIVVVKTGTLYESLLAEFNDDERHFA 195 M +KIDKE AY VR+D + W F YD IV G Y+ + + DD R FA Sbjct: 1 MATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFA 60 Query: 196 FVRMITGDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEI 375 FVR TGD MSKR+KFALIT+ G +VS +++A DK+LVKEVV ++A + SD+ E+ Sbjct: 61 FVRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKEL 120 Query: 376 TESKLRAALEKAGGANY 426 E +R+ L+KAGGANY Sbjct: 121 EEDFIRSELKKAGGANY 137
>sp|P34121|COAC_DICDI Coactosin (Cytoskeletal p17 protein) (Cyclic AMP-regulated protein p16) Length = 146 Score = 92.8 bits (229), Expect = 5e-19 Identities = 47/142 (33%), Positives = 84/142 (59%), Gaps = 3/142 (2%) Frame = +1 Query: 28 IDKETISEAYEDVRNDATETTWALFGYDDKKIVVV--KTGTLYESLLAEFND-DERHFAF 198 + + AY++V D+ +T W LF Y+ K +V+ K + L E N ER +A+ Sbjct: 4 VSSTELKAAYDEVLADSNDTNWCLFKYEGKNKIVLSGKGSGGFAELAQEINQPSERLYAY 63 Query: 199 VRMITGDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEIT 378 +R+++GD+ SKR+KF I++CG V + KAN++V K+ VK+V+ + V++ + +++ Sbjct: 64 LRVVSGDDESKRSKFVFISWCGEEVGPLAKANVSVHKASVKQVIKNIGVEVHYTVADDLN 123 Query: 379 ESKLRAALEKAGGANYGSAK*T 444 E +L + K+ GA+Y K T Sbjct: 124 EEELMTKVRKSSGADYSGNKST 145
>sp|Q9P7E8|APP1_SCHPO Protein app1 Length = 857 Score = 51.2 bits (121), Expect = 2e-06 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 7/144 (4%) Frame = +1 Query: 16 MTSKIDKET----ISEAYEDVRNDATETTWALFGYDDKK---IVVVKTGTLYESLLAEFN 174 M+ ++D T I YE V + A + +WA+FGY+ + + VV +G + L EF+ Sbjct: 1 MSFQLDTSTHGAEIRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFD 60 Query: 175 DDERHFAFVRMITGDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLF 354 ++ F F+R+ D + KF L+ +CG + +K ++ + V ++ Y V + Sbjct: 61 ENAVLFGFLRV--KDVNTGLNKFVLVCWCGE--AAARKGLFSIHMATVSNLLKGYHVQIT 116 Query: 355 TSDKNEITESKLRAALEKAGGANY 426 + +++ + + A G+ Y Sbjct: 117 GRESSDLNMDDIIRRVADASGSKY 140
>sp|Q62418|DBNL_MOUSE Drebrin-like protein (SH3 domain-containing protein 7) (Actin-binding protein 1) Length = 436 Score = 48.5 bits (114), Expect = 1e-05 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 3/139 (2%) Frame = +1 Query: 43 ISEAYEDVRNDATETTWALFGYDDKKIVVVKTGT---LYESLLAEFNDDERHFAFVRMIT 213 + EAY V + + T WALF Y+ + GT E L+ E N + +AF R+ Sbjct: 12 LQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEELVEELNSGKVMYAFCRV-- 69 Query: 214 GDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEITESKLR 393 D S KF LI + G V+ ++K S + + V + + ++ + Sbjct: 70 KDPNSGLPKFVLINWTGEGVNDVRKGACANHVSTMANFLKGAHVTINARAEEDVEPECIM 129 Query: 394 AALEKAGGANYGSAK*TTN 450 + KA GANY K +T+ Sbjct: 130 EKVAKASGANYSFHKESTS 148
>sp|Q9JHL4|DBNL_RAT Drebrin-like protein (SH3 domain-containing protein 7) Length = 436 Score = 47.4 bits (111), Expect = 2e-05 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 3/135 (2%) Frame = +1 Query: 43 ISEAYEDVRNDATETTWALFGYDDKKIVVVKTGT---LYESLLAEFNDDERHFAFVRMIT 213 + EAY V + + T WALF Y+ + GT E L+ E N + +AF R+ Sbjct: 12 LQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEELVEELNSGKVMYAFCRV-- 69 Query: 214 GDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEITESKLR 393 D S KF LI + G V+ ++K S + + V + + ++ + Sbjct: 70 KDPNSGLPKFVLINWTGEGVNDVRKGACANHVSTMANFLKGAHVTINARAEEDVEPECIM 129 Query: 394 AALEKAGGANYGSAK 438 + KA GANY K Sbjct: 130 EKVAKASGANYSFHK 144
>sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein (SH3 domain-containing protein 7) (Drebrin F) (Cervical SH3P7) (HPK1-interacting protein of 55 kDa) (HIP-55) (Cervical mucin-associated protein) Length = 430 Score = 47.0 bits (110), Expect = 3e-05 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 3/135 (2%) Frame = +1 Query: 43 ISEAYEDVRNDATETTWALFGYDDKKIVVVKTGT---LYESLLAEFNDDERHFAFVRMIT 213 + EAY V + + T WALF Y+ + GT E ++ E N + +AF R+ Sbjct: 12 LQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRV-- 69 Query: 214 GDEMSKRAKFALITYCGANVSVMKKANLTVDKSLVKEVVASYAVDLFTSDKNEITESKLR 393 D S KF LI + G V+ ++K S + + V + + ++ + Sbjct: 70 KDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINARAEEDVEPECIM 129 Query: 394 AALEKAGGANYGSAK 438 + KA GANY K Sbjct: 130 EKVAKASGANYSFHK 144
>sp|Q07266|DREB_RAT Drebrin (Developmentally regulated brain protein) Length = 707 Score = 32.7 bits (73), Expect = 0.55 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = +1 Query: 52 AYEDVRNDATETTWALFGY----DDKKIVVVKTGTLYESLLAEFNDDERHFAFVRMITGD 219 AYE+V + + WAL+ Y DD K+ G L E L F + + + F + D Sbjct: 16 AYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQE-LSGHFENQKVMYGFCSV--KD 72 Query: 220 EMSKRAKFALITYCGANVSVMKK 288 + K+ LI + G +V +K Sbjct: 73 SQAALPKYVLINWVGEDVPDARK 95
>sp|Q16643|DREB_HUMAN Drebrin (Developmentally regulated brain protein) Length = 649 Score = 32.7 bits (73), Expect = 0.55 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = +1 Query: 52 AYEDVRNDATETTWALFGY----DDKKIVVVKTGTLYESLLAEFNDDERHFAFVRMITGD 219 AYE+V + + WAL+ Y DD K+ G L E L F + + + F + D Sbjct: 16 AYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQE-LSGHFENQKVMYGFCSV--KD 72 Query: 220 EMSKRAKFALITYCGANVSVMKK 288 + K+ LI + G +V +K Sbjct: 73 SQAALPKYVLINWVGEDVPDARK 95
>sp|Q9QXS6|DREB_MOUSE Drebrin (Developmentally regulated brain protein) Length = 706 Score = 32.7 bits (73), Expect = 0.55 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = +1 Query: 52 AYEDVRNDATETTWALFGY----DDKKIVVVKTGTLYESLLAEFNDDERHFAFVRMITGD 219 AYE+V + + WAL+ Y DD K+ G L E L F + + + F + D Sbjct: 16 AYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQE-LSGHFENQKVMYGFCSV--KD 72 Query: 220 EMSKRAKFALITYCGANVSVMKK 288 + K+ LI + G +V +K Sbjct: 73 SQAALPKYVLINWVGEDVPDARK 95
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,334,084
Number of Sequences: 369166
Number of extensions: 721120
Number of successful extensions: 2126
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3551563800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
