Planaria EST Database

DrC_00514

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00514
         (1462 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11833|TBB_PARLI  Tubulin beta chain (Beta tubulin)            806   0.0  
sp|P68372|TBBX_MOUSE  Tubulin beta-? chain >gi|55977480|sp|P...   806   0.0  
sp|P30883|TBB4_XENLA  Tubulin beta-4 chain                        804   0.0  
sp|P02554|TBB_PIG  Tubulin beta chain                             798   0.0  
sp|P32882|TBB2_CHICK  Tubulin beta-2 chain (Beta-tubulin cla...   798   0.0  
sp|Q7JJU6|TBB2_PANTR  Tubulin beta-2 chain >gi|56754798|sp|P...   798   0.0  
sp|P09206|TBB3_CHICK  Tubulin beta-3 chain (Beta-tubulin cla...   797   0.0  
sp|Q91240|TBB_PSEAM  Tubulin beta chain (Beta tubulin)            797   0.0  
sp|O17449|TBB1_MANSE  Tubulin beta-1 chain (Beta-1 tubulin)       795   0.0  
sp|P09203|TBB1_CHICK  Tubulin beta-1 chain (Beta-tubulin cla...   795   0.0  

>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
          Length = 447

 Score =  806 bits (2082), Expect = 0.0
 Identities = 392/418 (93%), Positives = 399/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVL+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
 sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
          Length = 445

 Score =  806 bits (2081), Expect = 0.0
 Identities = 392/418 (93%), Positives = 399/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVL+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
          Length = 445

 Score =  804 bits (2077), Expect = 0.0
 Identities = 391/418 (93%), Positives = 398/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEATGGKYVPRAVL+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|P02554|TBB_PIG Tubulin beta chain
          Length = 445

 Score =  798 bits (2062), Expect = 0.0
 Identities = 387/418 (92%), Positives = 397/418 (94%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYVPRA+L+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
          Length = 445

 Score =  798 bits (2062), Expect = 0.0
 Identities = 386/418 (92%), Positives = 398/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEATG KYVPRA+L+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEATGNKYVPRAILVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
 sp|P69895|TBB2_MACMU Tubulin beta-2 chain
 sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
 sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
 sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
 sp|P69897|TBB5_RAT Tubulin beta-5 chain
 sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta tubulin)
          Length = 444

 Score =  798 bits (2061), Expect = 0.0
 Identities = 386/418 (92%), Positives = 398/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEATGGKYVPRA+L+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFIGNST
Sbjct: 313  VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
          Length = 445

 Score =  797 bits (2059), Expect = 0.0
 Identities = 388/418 (92%), Positives = 397/418 (94%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVL+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPF Q+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVP+LTQQMFDAKNMMAAC+P HGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFDAKNMMAACEPGHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
          Length = 445

 Score =  797 bits (2058), Expect = 0.0
 Identities = 387/418 (92%), Positives = 398/418 (95%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDP+GTYHGD++LQLERINVYYNEATGGKYVPRAVL+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPSGTYHGDNELQLERINVYYNEATGGKYVPRAVLVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+G FGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRMSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

>sp|O17449|TBB1_MANSE Tubulin beta-1 chain (Beta-1 tubulin)
          Length = 447

 Score =  795 bits (2054), Expect = 0.0
 Identities = 383/418 (91%), Positives = 397/418 (94%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRA+L+DLEPGT
Sbjct: 13   GNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430

>sp|P09203|TBB1_CHICK Tubulin beta-1 chain (Beta-tubulin class-I)
          Length = 445

 Score =  795 bits (2054), Expect = 0.0
 Identities = 384/418 (91%), Positives = 397/418 (94%)
 Frame = +2

Query: 2    GNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLIDLEPGT 181
            GNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA G KYVPRA+L+DLEPGT
Sbjct: 13   GNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGT 72

Query: 182  MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQG 361
            MDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQG
Sbjct: 73   MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQG 132

Query: 362  FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQL 541
            FQ                   KIREEYPDRIMNTFSV+PSPKVSDTVVEPYNAT+SVHQL
Sbjct: 133  FQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATVSVHQL 192

Query: 542  VENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 721
            VENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK
Sbjct: 193  VENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRK 252

Query: 722  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLT 901
            LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLT
Sbjct: 253  LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLT 312

Query: 902  VAALFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 1081
            VAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST
Sbjct: 313  VAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNST 372

Query: 1082 AIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 1255
            AIQELFKR+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 373  AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,550,542
Number of Sequences: 369166
Number of extensions: 3168932
Number of successful extensions: 9008
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8289
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 17477978805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00514

  1. Dr_sW_015_L10
  2. Dr_sW_013_H17
  3. Dr_sW_009_C24
  4. Dr_sW_024_I07
  5. Dr_sW_002_C01
  6. Dr_sW_027_F21
  7. Dr_sW_005_K20
  8. Dr_sW_028_I14
  9. Dr_sW_002_D22
  10. Dr_sW_024_J16
  11. Dr_sW_003_K10
  12. Dr_sW_006_C07
  13. Dr_sW_028_D18
  14. Dr_sW_015_B06