Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_F21
(855 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 535 e-152
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 535 e-152
sp|P41386|TBB_HALDI Tubulin beta chain (Beta tubulin) 535 e-152
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 535 e-152
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 534 e-151
sp|P02554|TBB_PIG Tubulin beta chain 534 e-151
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 532 e-151
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 532 e-151
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 532 e-151
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 531 e-150
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 535 bits (1379), Expect = e-152
Identities = 262/284 (92%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 535 bits (1379), Expect = e-152
Identities = 262/284 (92%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|P41386|TBB_HALDI Tubulin beta chain (Beta tubulin)
Length = 341
Score = 535 bits (1379), Expect = e-152
Identities = 262/284 (92%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 11 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 70
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 71 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 130
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 131 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 190
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 191 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 250
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 251 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 294
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 535 bits (1378), Expect = e-152
Identities = 262/284 (92%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 534 bits (1376), Expect = e-151
Identities = 261/284 (91%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS+TFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSSTFI 368
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 534 bits (1375), Expect = e-151
Identities = 261/284 (91%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 532 bits (1370), Expect = e-151
Identities = 259/284 (91%), Positives = 264/284 (92%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 532 bits (1370), Expect = e-151
Identities = 259/284 (91%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 532 bits (1370), Expect = e-151
Identities = 259/284 (91%), Positives = 265/284 (93%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKE+ESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQMFD+KNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 368
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 531 bits (1367), Expect = e-150
Identities = 259/284 (91%), Positives = 264/284 (92%)
Frame = +3
Query: 3 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXX 182
FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+VRKEAESCDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Query: 183 XXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 362
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 204
Query: 363 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 542
EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH
Sbjct: 205 EALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLH 264
Query: 543 FFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAALFRGRMSMK 722
FFMPGFAPLTSRGSQQYRALTVPELTQQ+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMK
Sbjct: 265 FFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMK 324
Query: 723 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 854
EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ TFI
Sbjct: 325 EVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFI 368
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,357,245
Number of Sequences: 369166
Number of extensions: 2029071
Number of successful extensions: 5937
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5536
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8438301375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)