Planaria EST Database

DrC_00491

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00491
         (1413 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25708|NUBM_BOVIN  NADH-ubiquinone oxidoreductase 51 kDa ...   734   0.0  
sp|P49821|NUBM_HUMAN  NADH-ubiquinone oxidoreductase 51 kDa ...   731   0.0  
sp|Q8HXQ9|NUBM_MACFA  NADH-ubiquinone oxidoreductase 51 kDa ...   731   0.0  
sp|Q91YT0|NUBM_MOUSE  NADH-ubiquinone oxidoreductase 51 kDa ...   729   0.0  
sp|P24917|NUBM_NEUCR  NADH-ubiquinone oxidoreductase 51 kDa ...   665   0.0  
sp|Q92406|NUBM_ASPNG  NADH-ubiquinone oxidoreductase 51 kDa ...   637   0.0  
sp|P56912|NUOF1_RHIME  NADH-quinone oxidoreductase chain F 1...   606   e-173
sp|Q9ZE33|NUOF_RICPR  NADH-quinone oxidoreductase chain F (N...   601   e-171
sp|O07948|NUOF_RHOCA  NADH-quinone oxidoreductase chain F (N...   593   e-169
sp|P29913|NQO1_PARDE  NADH-quinone oxidoreductase chain 1 (N...   583   e-166

>sp|P25708|NUBM_BOVIN NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
            flavoprotein 1)
          Length = 464

 Score =  734 bits (1896), Expect = 0.0
 Identities = 340/419 (81%), Positives = 381/419 (90%), Gaps = 1/419 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKDEDRIF+NLYGR+DW L+ A SRG W+KTKEI+LKG +WIL E+K SGLRGRGGAGFP
Sbjct: 35   LKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRGRGGAGFP 94

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDPH LVEGCL+ G+AMGA AA
Sbjct: 95   TGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAA 154

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+F+ RGAGAYICGEETALIE
Sbjct: 155  YIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIE 214

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            SIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTICRRGG WFA FGRERN GTK
Sbjct: 215  SIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRERNSGTK 274

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LFNISGHVNNPCTVEE MS+PLK LIEKH  G+ GGWDNLLAVIPGGSSTPLIPK+VC++
Sbjct: 275  LFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCET 334

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
            VLMDFD+L++AQT LGTAA+IVM++  D+V+ IARL++FYKHESCGQCTPCREG  WM K
Sbjct: 335  VLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNK 394

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            ++ RFV G+A   EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RM+ +
Sbjct: 395  VMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQQF 453

>sp|P49821|NUBM_HUMAN NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
            flavoprotein 1)
          Length = 464

 Score =  731 bits (1888), Expect = 0.0
 Identities = 339/419 (80%), Positives = 382/419 (91%), Gaps = 1/419 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKDEDRIF+NLYGR+DW L+ ++SRG W+KTKEI+LKG +WIL EIK SGLRGRGGAGFP
Sbjct: 35   LKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFP 94

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDPH L+EGCL+ G+AMGA AA
Sbjct: 95   TGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAA 154

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+F+ RGAGAYICGEETALIE
Sbjct: 155  YIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIE 214

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            SIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTICRRGG WFA FGRERN GTK
Sbjct: 215  SIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTK 274

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LFNISGHVN+PCTVEE MS+PLK LIEKH  G+ GGWDNLLAVIPGGSSTPLIPK+VC++
Sbjct: 275  LFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCET 334

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
            VLMDFD+LV+AQT LGTAA+IVM++  D+V+ IARL++FYKHESCGQCTPCREG  WM K
Sbjct: 335  VLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNK 394

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            ++ RFV G+A   EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RM+ +
Sbjct: 395  VMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRF 453

>sp|Q8HXQ9|NUBM_MACFA NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
            flavoprotein 1)
          Length = 464

 Score =  731 bits (1887), Expect = 0.0
 Identities = 340/419 (81%), Positives = 382/419 (91%), Gaps = 1/419 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKDEDRIF+NLYGR+DW L+ A+SRG W+KTKEI+LKG +WIL EIK SGLRGRGGAGFP
Sbjct: 35   LKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFP 94

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDPH LVEGCL+ G+AMGA AA
Sbjct: 95   TGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAA 154

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+F+ RGAGAYICGEETALIE
Sbjct: 155  YIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIE 214

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            SIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTICRRGG WFA FGRERN GTK
Sbjct: 215  SIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTK 274

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LFNISGHVN+PCTVEE MS+PLK LIEKH  G+ GGWDNLLAVIPGGSSTPLIPK+VC++
Sbjct: 275  LFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCET 334

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
            VLMDFD+LV+AQT LGTAA+IVM++  D+V+ IARL++FYK+ESCGQCTPCREG  WM K
Sbjct: 335  VLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKYESCGQCTPCREGVDWMNK 394

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            ++ RFV G+A   EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RM+ +
Sbjct: 395  VMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRF 453

>sp|Q91YT0|NUBM_MOUSE NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
            flavoprotein 1)
          Length = 464

 Score =  729 bits (1881), Expect = 0.0
 Identities = 339/419 (80%), Positives = 380/419 (90%), Gaps = 1/419 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKDEDRIF+NLYGR+DW L+ A+ RG W+KTKEI+LKG +WIL E+K SGLRGRGGAGFP
Sbjct: 35   LKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMKTSGLRGRGGAGFP 94

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREIMRHDPH LVEGCL+ G+AMGA AA
Sbjct: 95   TGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGARAA 154

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+ +DFD+F+ RGAGAYICGEETALIE
Sbjct: 155  YIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIE 214

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            SIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTICRRGG WFA FGRERN GTK
Sbjct: 215  SIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTK 274

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LFNISGHVN+PCTVEE MS+PLK LIEKH  G+ GGWDNLLAVIPGGSSTPLIPK+VC++
Sbjct: 275  LFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCET 334

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
            VLMDFD+LV+AQT LGTAA+IVM++  D+V+ IARL++FYKHESCGQCTPCREG  WM K
Sbjct: 335  VLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNK 394

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            ++ RFV G+A   EID LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELE RM+ +
Sbjct: 395  VMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRF 453

>sp|P24917|NUBM_NEUCR NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD)
          Length = 493

 Score =  665 bits (1717), Expect = 0.0
 Identities = 306/422 (72%), Positives = 361/422 (85%), Gaps = 4/422 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKD+DRIF NLYGRY   L+ A   G W KTKEI+LKGH+WI+ E+K SGLRGRGGAGFP
Sbjct: 44   LKDQDRIFQNLYGRYPPDLKHAKKMGDWHKTKEILLKGHDWIIGEVKASGLRGRGGAGFP 103

Query: 300  TGMKWGFMN----KPSDRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGA 467
            +G+KW FMN       D+P+YLVVNADEGEPGTCKDREIMR DPH LVEGCL+AG+AM A
Sbjct: 104  SGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLVAGRAMNA 163

Query: 468  VAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETA 647
             AAYIYIRGEF  EA+ +Q AINEAY  G IGKNACG+G+DFD+++HRGAGAY+CGEET+
Sbjct: 164  TAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYDFDVYLHRGAGAYVCGEETS 223

Query: 648  LIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNK 827
            LIES+EGK GKPRLKPPFPA +GLFGCP+TV+NVETVAVAPTICRRGG WFA FGRERN+
Sbjct: 224  LIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAPTICRRGGNWFAGFGRERNQ 283

Query: 828  GTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNV 1007
            GTKLF ISGHVNNPCTVEE MSIP++ LI+KHC G+ GGWDNLLAVIPGGSSTP++PK++
Sbjct: 284  GTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKHI 343

Query: 1008 CDSVLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGW 1187
            CD+ LMDFD+L ++Q+ LGTAALIVM+K  DVVR I+RL  FY+HESCGQCTPCREG+ W
Sbjct: 344  CDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKW 403

Query: 1188 MQKIVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMK 1367
             ++I+KRF  G   + EIDML E++KQ+EGHTICALG+  AWP+QGLIRHFRPELE R++
Sbjct: 404  TEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIR 463

Query: 1368 NY 1373
             +
Sbjct: 464  KF 465

>sp|Q92406|NUBM_ASPNG NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
            precursor (Complex I-51KD) (CI-51KD)
          Length = 496

 Score =  637 bits (1643), Expect = 0.0
 Identities = 292/422 (69%), Positives = 353/422 (83%), Gaps = 4/422 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LKD+DRIF+NLYG +   L+ AM  G W +TK+I+LKGH+W+++E+K SGLRGRGGAGFP
Sbjct: 46   LKDQDRIFTNLYGHHGADLKSAMKYGDWHRTKDIVLKGHDWLISELKASGLRGRGGAGFP 105

Query: 300  TGMKWGFMN----KPSDRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGA 467
            +G+K+ FMN        RP+YLVVNADEGEPGTCKDREIMR DP  L+EGCL+ G+AM A
Sbjct: 106  SGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMRKDPQKLIEGCLVVGRAMNA 165

Query: 468  VAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETA 647
             AAY+YIRGEFY EA+ +Q AINEAY+AG IGKNACGTG+DFD+++HRG GAY+CGEET+
Sbjct: 166  NAAYMYIRGEFYQEATVLQRAINEAYEAGLIGKNACGTGYDFDVYIHRGMGAYVCGEETS 225

Query: 648  LIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNK 827
            LIESIEGK GKPRLKPPFPA +GLFGCP+TV+NVETVAV PTI RRG  WF+ FGRERN 
Sbjct: 226  LIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVTPTIMRRGASWFSSFGRERNA 285

Query: 828  GTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNV 1007
            GTKLF ISGHVNNPCTVEE MSI L+ +I++HC G+ GGWDNLLAVIPGGSSTP++PK +
Sbjct: 286  GTKLFCISGHVNNPCTVEEEMSISLRDVIDRHCGGVRGGWDNLLAVIPGGSSTPVLPKTI 345

Query: 1008 CDSVLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGW 1187
            CD  LMDFD+L ++Q+ LGTAA+IVM+K  D+VR I+RL  FYKHESCGQCTPCREG+ W
Sbjct: 346  CDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSTFYKHESCGQCTPCREGSKW 405

Query: 1188 MQKIVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMK 1367
               +++R   G A + EIDML E++KQ+EGHTICALG+  AWP+QGLIRHFRPELE R++
Sbjct: 406  TMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIR 465

Query: 1368 NY 1373
             Y
Sbjct: 466  EY 467

>sp|P56912|NUOF1_RHIME NADH-quinone oxidoreductase chain F 1 (NADH dehydrogenase I, chain F
            1) (NDH-1, chain F 1)
          Length = 434

 Score =  606 bits (1563), Expect = e-173
 Identities = 279/419 (66%), Positives = 338/419 (80%), Gaps = 1/419 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            L+DEDRIF+N+YG  D  L+ AM+RGHW  TK+ + KG +WI+NE+K SGLRGRGGAGFP
Sbjct: 2    LRDEDRIFTNIYGLKDKSLRGAMARGHWDGTKQFLEKGRDWIINEVKASGLRGRGGAGFP 61

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FM K SD RP YLVVNADE EPGTCKDR+IMRHDPHTL+EGC+IA  AMGA AA
Sbjct: 62   TGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDPHTLIEGCVIASFAMGAHAA 121

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIY+RGEF  E   +Q AI+E Y+ G +GKN    G+D DI++H GAGAYICGEETAL+E
Sbjct: 122  YIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDIYVHHGAGAYICGEETALLE 180

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            S+EGK+G+PRLKPPFPA++GL+GCPTTV+NVE++AV PTI RRG  W+  FGR  N GTK
Sbjct: 181  SLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTILRRGAGWYTSFGRPNNHGTK 240

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            L+++SGHVN PCTVE+ MSIP   LIEKHC GI GGWDNLLAVIPGGSS P +P      
Sbjct: 241  LYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLLAVIPGGSSVPCVPGAQMKD 300

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
             +MD+D L E  + LGTAA+IVM+K  D+++ I RL  FYKHESCGQCTPCREGTGWM +
Sbjct: 301  AIMDYDGLRELGSGLGTAAVIVMDKSTDIIKAIWRLSAFYKHESCGQCTPCREGTGWMMR 360

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            +++R V G A K EIDML++++KQ+EGHTICALGD AAWP+QGLI+HFRPE+E R+  Y
Sbjct: 361  VMERMVQGRAQKREIDMLFDVTKQVEGHTICALGDAAAWPIQGLIKHFRPEMEKRIDEY 419

>sp|Q9ZE33|NUOF_RICPR NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
            (NDH-1, chain F)
          Length = 421

 Score =  601 bits (1550), Expect = e-171
 Identities = 275/418 (65%), Positives = 339/418 (81%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            LK+ED+IF+NLYG+  + L+ +  RG W+ TK +I KG ++I++E+K SGLRGRGGAGF 
Sbjct: 2    LKEEDKIFTNLYGQQSYDLKSSQKRGDWYNTKALIDKGRDFIIDEVKKSGLRGRGGAGFS 61

Query: 300  TGMKWGFMNKPSDRPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAAY 479
            TGMKW FM K S++P YLVVNADE EPGTCKDR+I+R +PH L+EGCLIA  A+GA   Y
Sbjct: 62   TGMKWSFMPKNSEKPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLIASFAIGANTCY 121

Query: 480  IYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIES 659
            IYIRGEFYNEASNMQ A++EAYK G IGKNACG+GFD +I++HRGAGAYICGEETAL+ES
Sbjct: 122  IYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCNIYLHRGAGAYICGEETALLES 181

Query: 660  IEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTKL 839
            +EGK+G PRLKPPFPA  GL+GCPTT++NVE++AV PTI RRG  WFA  G+  N GTK+
Sbjct: 182  LEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILRRGASWFAAIGKPNNTGTKV 241

Query: 840  FNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDSV 1019
            F ISGHVN PC +EE M +PLK LIEK+  G+ GGW+NL A+IPGG+S PL+PK++C+ V
Sbjct: 242  FCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKAIIPGGASVPLLPKSLCE-V 300

Query: 1020 LMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQKI 1199
             MDFDSL    + LGT  +IVM+K  D++  IARL  FY HESCGQCTPCREGTGWM ++
Sbjct: 301  EMDFDSLRTVGSGLGTGGIIVMDKSTDIIYAIARLSKFYMHESCGQCTPCREGTGWMWRV 360

Query: 1200 VKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNY 1373
            + R VNGNA K EID L  ++K+IEGHTICALGD AAWP+QGLIRHFR E+E R+K++
Sbjct: 361  MMRLVNGNAKKNEIDTLLNVTKEIEGHTICALGDAAAWPIQGLIRHFRDEIEQRIKSF 418

>sp|O07948|NUOF_RHOCA NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
            (NDH-1, chain F)
          Length = 431

 Score =  593 bits (1530), Expect = e-169
 Identities = 272/420 (64%), Positives = 334/420 (79%), Gaps = 1/420 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            L D DRIF+N+YG +D  L+ AM+RGHW  T  I+  G +WI+ ++K SGLRGRGGAGFP
Sbjct: 2    LNDHDRIFTNIYGMHDRSLKGAMARGHWDGTAAILGNGRDWIIEQVKASGLRGRGGAGFP 61

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TG+KW FM K SD RP +LV+NADE EPGTCKDREIMRHDPHTL+EG LIAG AMGA AA
Sbjct: 62   TGLKWSFMPKQSDGRPSFLVINADESEPGTCKDREIMRHDPHTLIEGALIAGFAMGARAA 121

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGE+  E   +Q AI+E Y+AG IGKNAC + +DFD+++H GAGAYICGEETAL+E
Sbjct: 122  YIYIRGEYVREKEALQAAIDECYEAGLIGKNACRSDYDFDVYLHHGAGAYICGEETALLE 181

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            S+EGK+G PR+KPPFPA  GL+GCPTTV+NVE++AV PTI RRGG WFA  GR  N G K
Sbjct: 182  SLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTILRRGGAWFAGIGRPNNTGVK 241

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LF +SGHVN PC VEE MSI +K LIEKH  G+ GGW NL AVIPGG+S P+IP ++C+ 
Sbjct: 242  LFAMSGHVNTPCVVEEAMSISMKELIEKHGGGVRGGWKNLKAVIPGGASCPVIPAHLCED 301

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
             +MD+D + E Q++ GTA LIVM++  D+++ IARL  F+KHESCGQCTPCREGT WM +
Sbjct: 302  AIMDYDGMREKQSSFGTACLIVMDQQTDIIKAIARLSKFFKHESCGQCTPCREGTSWMWR 361

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMKNYK 1376
            +++R V G A   EIDML+ ++KQ+EGHTICALGD AAWP+QGLIRH+R E+E R+K  K
Sbjct: 362  VMERLVTGEAEVEEIDMLFSVTKQVEGHTICALGDAAAWPIQGLIRHYREEIEDRIKARK 421

>sp|P29913|NQO1_PARDE NADH-quinone oxidoreductase chain 1 (NADH dehydrogenase I, chain 1)
            (NDH-1, chain 1)
          Length = 431

 Score =  583 bits (1503), Expect = e-166
 Identities = 270/417 (64%), Positives = 331/417 (79%), Gaps = 1/417 (0%)
 Frame = +3

Query: 120  LKDEDRIFSNLYGRYDWHLQKAMSRGHWFKTKEIILKGHEWILNEIKISGLRGRGGAGFP 299
            L D+DRIF+NLYG  D  L  A  RGHW  T  II +G + I++E+K SGLRGRGGAGFP
Sbjct: 2    LNDQDRIFTNLYGMGDRSLAGAKKRGHWDGTAAIIQRGRDKIIDEMKASGLRGRGGAGFP 61

Query: 300  TGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDPHTLVEGCLIAGKAMGAVAA 476
            TGMKW FM K SD RP YLV+NADE EP TCKDREIMRHDPHTL+EG LIA  AMGA AA
Sbjct: 62   TGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDPHTLIEGALIASFAMGAHAA 121

Query: 477  YIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIFMHRGAGAYICGEETALIE 656
            YIYIRGEF  E   +Q AI+E Y AG +G+NA G+G+DFD+++H GAGAYICGEETAL+E
Sbjct: 122  YIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFDLYLHHGAGAYICGEETALLE 181

Query: 657  SIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICRRGGEWFAQFGRERNKGTK 836
            S+EGK+G PR+KPPFPA  GL+GCPTTV+NVE++AV PTI RRG EWFA FGR  N G K
Sbjct: 182  SLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTILRRGAEWFASFGRPNNAGVK 241

Query: 837  LFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLAVIPGGSSTPLIPKNVCDS 1016
            LF ++GHVN PC VEE MSIP++ LIEKH  GI GGW NL AVIPGG+S P++    C++
Sbjct: 242  LFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLKAVIPGGASCPVLTAEQCEN 301

Query: 1017 VLMDFDSLVEAQTALGTAALIVMNKDADVVRCIARLMDFYKHESCGQCTPCREGTGWMQK 1196
             +MD+D + + +++ GTA +IVM++  DVV+ I RL  F+KHESCGQCTPCREGTGWM +
Sbjct: 302  AIMDYDGMRDVRSSFGTACMIVMDQSTDVVKAIWRLSKFFKHESCGQCTPCREGTGWMMR 361

Query: 1197 IVKRFVNGNAVKPEIDMLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEMRMK 1367
            +++R V G+A   EIDML++++KQ+EGHTICALGD AAWP+QGLIR+FR E+E R+K
Sbjct: 362  VMERLVRGDAEVEEIDMLFDVTKQVEGHTICALGDAAAWPIQGLIRNFREEIEDRIK 418

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,886,371
Number of Sequences: 369166
Number of extensions: 3725299
Number of successful extensions: 9639
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9580
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16837087640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00491

  1. Dr_sW_013_B07
  2. Dr_sW_018_D01
  3. Dr_sW_007_C07
  4. Dr_sW_022_F21
  5. Dr_sW_025_K14