Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_D01
(832 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P25708|NUBM_BOVIN NADH-ubiquinone oxidoreductase 51 kDa ... 493 e-139
sp|Q8HXQ9|NUBM_MACFA NADH-ubiquinone oxidoreductase 51 kDa ... 491 e-139
sp|P49821|NUBM_HUMAN NADH-ubiquinone oxidoreductase 51 kDa ... 491 e-138
sp|Q91YT0|NUBM_MOUSE NADH-ubiquinone oxidoreductase 51 kDa ... 489 e-138
sp|P24917|NUBM_NEUCR NADH-ubiquinone oxidoreductase 51 kDa ... 453 e-127
sp|Q92406|NUBM_ASPNG NADH-ubiquinone oxidoreductase 51 kDa ... 431 e-120
sp|Q9ZE33|NUOF_RICPR NADH-quinone oxidoreductase chain F (N... 404 e-112
sp|O07948|NUOF_RHOCA NADH-quinone oxidoreductase chain F (N... 398 e-110
sp|P56912|NUOF1_RHIME NADH-quinone oxidoreductase chain F 1... 395 e-110
sp|P29913|NQO1_PARDE NADH-quinone oxidoreductase chain 1 (N... 395 e-109
>sp|P25708|NUBM_BOVIN NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
flavoprotein 1)
Length = 464
Score = 493 bits (1270), Expect = e-139
Identities = 230/271 (84%), Positives = 253/271 (93%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
IL E+K SGLRGRGGAGFPTG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDP
Sbjct: 76 ILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDP 135
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
H LVEGCL+ G+AMGA AAYIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+
Sbjct: 136 HKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDV 195
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
F+ RGAGAYICGEETALIESIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTIC
Sbjct: 196 FVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTIC 255
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRGG WFA FGRERN GTKLFNISGHVNNPCTVEE MS+PLK LIEKH G+ GGWDNLL
Sbjct: 256 RRGGAWFASFGRERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLL 315
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
AVIPGGSSTPLIPK+VC++VLMDFD+L++AQ
Sbjct: 316 AVIPGGSSTPLIPKSVCETVLMDFDALIQAQ 346
>sp|Q8HXQ9|NUBM_MACFA NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
flavoprotein 1)
Length = 464
Score = 491 bits (1265), Expect = e-139
Identities = 231/271 (85%), Positives = 253/271 (93%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
IL EIK SGLRGRGGAGFPTG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDP
Sbjct: 76 ILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDP 135
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
H LVEGCL+ G+AMGA AAYIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+
Sbjct: 136 HKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDV 195
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
F+ RGAGAYICGEETALIESIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTIC
Sbjct: 196 FVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTIC 255
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRGG WFA FGRERN GTKLFNISGHVN+PCTVEE MS+PLK LIEKH G+ GGWDNLL
Sbjct: 256 RRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLL 315
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
AVIPGGSSTPLIPK+VC++VLMDFD+LV+AQ
Sbjct: 316 AVIPGGSSTPLIPKSVCETVLMDFDALVQAQ 346
>sp|P49821|NUBM_HUMAN NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
flavoprotein 1)
Length = 464
Score = 491 bits (1263), Expect = e-138
Identities = 230/271 (84%), Positives = 253/271 (93%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
IL EIK SGLRGRGGAGFPTG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREI+RHDP
Sbjct: 76 ILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDP 135
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
H L+EGCL+ G+AMGA AAYIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+G+DFD+
Sbjct: 136 HKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDV 195
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
F+ RGAGAYICGEETALIESIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTIC
Sbjct: 196 FVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTIC 255
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRGG WFA FGRERN GTKLFNISGHVN+PCTVEE MS+PLK LIEKH G+ GGWDNLL
Sbjct: 256 RRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLL 315
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
AVIPGGSSTPLIPK+VC++VLMDFD+LV+AQ
Sbjct: 316 AVIPGGSSTPLIPKSVCETVLMDFDALVQAQ 346
>sp|Q91YT0|NUBM_MOUSE NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD) (NADH dehydrogenase
flavoprotein 1)
Length = 464
Score = 489 bits (1259), Expect = e-138
Identities = 230/271 (84%), Positives = 252/271 (92%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
IL E+K SGLRGRGGAGFPTG+KW FMNKPSD RPKYLVVNADEGEPGTCKDREIMRHDP
Sbjct: 76 ILGEMKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDP 135
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
H LVEGCL+ G+AMGA AAYIYIRGEFYNEASN+QVAI EAY+AG IGKNACG+ +DFD+
Sbjct: 136 HKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDV 195
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
F+ RGAGAYICGEETALIESIEGKQGKPRLKPPFPAD+G+FGCPTTV+NVETVAV+PTIC
Sbjct: 196 FVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTIC 255
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRGG WFA FGRERN GTKLFNISGHVN+PCTVEE MS+PLK LIEKH G+ GGWDNLL
Sbjct: 256 RRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLL 315
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
AVIPGGSSTPLIPK+VC++VLMDFD+LV+AQ
Sbjct: 316 AVIPGGSSTPLIPKSVCETVLMDFDALVQAQ 346
>sp|P24917|NUBM_NEUCR NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD)
Length = 493
Score = 453 bits (1165), Expect = e-127
Identities = 208/274 (75%), Positives = 242/274 (88%), Gaps = 4/274 (1%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMN----KPSDRPKYLVVNADEGEPGTCKDREIMR 168
I+ E+K SGLRGRGGAGFP+G+KW FMN D+P+YLVVNADEGEPGTCKDREIMR
Sbjct: 85 IIGEVKASGLRGRGGAGFPSGLKWSFMNFKDWDKDDKPRYLVVNADEGEPGTCKDREIMR 144
Query: 169 HDPHTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFD 348
DPH LVEGCL+AG+AM A AAYIYIRGEF EA+ +Q AINEAY G IGKNACG+G+D
Sbjct: 145 KDPHKLVEGCLVAGRAMNATAAYIYIRGEFIQEAAILQNAINEAYADGLIGKNACGSGYD 204
Query: 349 FDIFMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAP 528
FD+++HRGAGAY+CGEET+LIES+EGK GKPRLKPPFPA +GLFGCP+TV+NVETVAVAP
Sbjct: 205 FDVYLHRGAGAYVCGEETSLIESLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVAVAP 264
Query: 529 TICRRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWD 708
TICRRGG WFA FGRERN+GTKLF ISGHVNNPCTVEE MSIP++ LI+KHC G+ GGWD
Sbjct: 265 TICRRGGNWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWD 324
Query: 709 NLLAVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
NLLAVIPGGSSTP++PK++CD+ LMDFD+L ++Q
Sbjct: 325 NLLAVIPGGSSTPILPKHICDTQLMDFDALKDSQ 358
>sp|Q92406|NUBM_ASPNG NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial
precursor (Complex I-51KD) (CI-51KD)
Length = 496
Score = 431 bits (1108), Expect = e-120
Identities = 199/274 (72%), Positives = 235/274 (85%), Gaps = 4/274 (1%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMN----KPSDRPKYLVVNADEGEPGTCKDREIMR 168
+++E+K SGLRGRGGAGFP+G+K+ FMN RP+YLVVNADEGEPGTCKDREIMR
Sbjct: 87 LISELKASGLRGRGGAGFPSGLKYSFMNFKDWDKDPRPRYLVVNADEGEPGTCKDREIMR 146
Query: 169 HDPHTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFD 348
DP L+EGCL+ G+AM A AAY+YIRGEFY EA+ +Q AINEAY+AG IGKNACGTG+D
Sbjct: 147 KDPQKLIEGCLVVGRAMNANAAYMYIRGEFYQEATVLQRAINEAYEAGLIGKNACGTGYD 206
Query: 349 FDIFMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAP 528
FD+++HRG GAY+CGEET+LIESIEGK GKPRLKPPFPA +GLFGCP+TV+NVETVAV P
Sbjct: 207 FDVYIHRGMGAYVCGEETSLIESIEGKAGKPRLKPPFPAAVGLFGCPSTVTNVETVAVTP 266
Query: 529 TICRRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWD 708
TI RRG WF+ FGRERN GTKLF ISGHVNNPCTVEE MSI L+ +I++HC G+ GGWD
Sbjct: 267 TIMRRGASWFSSFGRERNAGTKLFCISGHVNNPCTVEEEMSISLRDVIDRHCGGVRGGWD 326
Query: 709 NLLAVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
NLLAVIPGGSSTP++PK +CD LMDFD+L ++Q
Sbjct: 327 NLLAVIPGGSSTPVLPKTICDDQLMDFDALKDSQ 360
>sp|Q9ZE33|NUOF_RICPR NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F)
Length = 421
Score = 404 bits (1037), Expect = e-112
Identities = 186/266 (69%), Positives = 223/266 (83%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSDRPKYLVVNADEGEPGTCKDREIMRHDPH 180
I++E+K SGLRGRGGAGF TGMKW FM K S++P YLVVNADE EPGTCKDR+I+R +PH
Sbjct: 43 IIDEVKKSGLRGRGGAGFSTGMKWSFMPKNSEKPCYLVVNADESEPGTCKDRDILRFEPH 102
Query: 181 TLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDIF 360
L+EGCLIA A+GA YIYIRGEFYNEASNMQ A++EAYK G IGKNACG+GFD +I+
Sbjct: 103 KLIEGCLIASFAIGANTCYIYIRGEFYNEASNMQRALDEAYKEGLIGKNACGSGFDCNIY 162
Query: 361 MHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTICR 540
+HRGAGAYICGEETAL+ES+EGK+G PRLKPPFPA GL+GCPTT++NVE++AV PTI R
Sbjct: 163 LHRGAGAYICGEETALLESLEGKKGMPRLKPPFPAGFGLYGCPTTINNVESIAVVPTILR 222
Query: 541 RGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLLA 720
RG WFA G+ N GTK+F ISGHVN PC +EE M +PLK LIEK+ G+ GGW+NL A
Sbjct: 223 RGASWFAAIGKPNNTGTKVFCISGHVNKPCNIEEVMGVPLKELIEKYAGGVRGGWNNLKA 282
Query: 721 VIPGGSSTPLIPKNVCDSVLMDFDSL 798
+IPGG+S PL+PK++C+ V MDFDSL
Sbjct: 283 IIPGGASVPLLPKSLCE-VEMDFDSL 307
>sp|O07948|NUOF_RHOCA NADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F)
(NDH-1, chain F)
Length = 431
Score = 398 bits (1022), Expect = e-110
Identities = 184/271 (67%), Positives = 219/271 (80%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
I+ ++K SGLRGRGGAGFPTG+KW FM K SD RP +LV+NADE EPGTCKDREIMRHDP
Sbjct: 43 IIEQVKASGLRGRGGAGFPTGLKWSFMPKQSDGRPSFLVINADESEPGTCKDREIMRHDP 102
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
HTL+EG LIAG AMGA AAYIYIRGE+ E +Q AI+E Y+AG IGKNAC + +DFD+
Sbjct: 103 HTLIEGALIAGFAMGARAAYIYIRGEYVREKEALQAAIDECYEAGLIGKNACRSDYDFDV 162
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
++H GAGAYICGEETAL+ES+EGK+G PR+KPPFPA GL+GCPTTV+NVE++AV PTI
Sbjct: 163 YLHHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGSGLYGCPTTVNNVESIAVVPTIL 222
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRGG WFA GR N G KLF +SGHVN PC VEE MSI +K LIEKH G+ GGW NL
Sbjct: 223 RRGGAWFAGIGRPNNTGVKLFAMSGHVNTPCVVEEAMSISMKELIEKHGGGVRGGWKNLK 282
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVEAQ 810
AVIPGG+S P+IP ++C+ +MD+D + E Q
Sbjct: 283 AVIPGGASCPVIPAHLCEDAIMDYDGMREKQ 313
>sp|P56912|NUOF1_RHIME NADH-quinone oxidoreductase chain F 1 (NADH dehydrogenase I, chain
F 1) (NDH-1, chain F 1)
Length = 434
Score = 395 bits (1015), Expect = e-110
Identities = 185/269 (68%), Positives = 217/269 (80%), Gaps = 1/269 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
I+NE+K SGLRGRGGAGFPTG+KW FM K SD RP YLVVNADE EPGTCKDR+IMRHDP
Sbjct: 43 IINEVKASGLRGRGGAGFPTGLKWSFMPKESDGRPHYLVVNADESEPGTCKDRDIMRHDP 102
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
HTL+EGC+IA AMGA AAYIY+RGEF E +Q AI+E Y+ G +GKN G+D DI
Sbjct: 103 HTLIEGCVIASFAMGAHAAYIYVRGEFIREREALQAAIDECYEYGLLGKNN-KLGYDIDI 161
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
++H GAGAYICGEETAL+ES+EGK+G+PRLKPPFPA++GL+GCPTTV+NVE++AV PTI
Sbjct: 162 YVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANMGLYGCPTTVNNVESIAVTPTIL 221
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRG W+ FGR N GTKL+++SGHVN PCTVE+ MSIP LIEKHC GI GGWDNLL
Sbjct: 222 RRGAGWYTSFGRPNNHGTKLYSVSGHVNRPCTVEDAMSIPFHELIEKHCGGIRGGWDNLL 281
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSLVE 804
AVIPGGSS P +P +MD+D L E
Sbjct: 282 AVIPGGSSVPCVPGAQMKDAIMDYDGLRE 310
>sp|P29913|NQO1_PARDE NADH-quinone oxidoreductase chain 1 (NADH dehydrogenase I, chain 1)
(NDH-1, chain 1)
Length = 431
Score = 395 bits (1014), Expect = e-109
Identities = 182/267 (68%), Positives = 216/267 (80%), Gaps = 1/267 (0%)
Frame = +1
Query: 1 ILNEIKISGLRGRGGAGFPTGMKWGFMNKPSD-RPKYLVVNADEGEPGTCKDREIMRHDP 177
I++E+K SGLRGRGGAGFPTGMKW FM K SD RP YLV+NADE EP TCKDREIMRHDP
Sbjct: 43 IIDEMKASGLRGRGGAGFPTGMKWSFMPKESDGRPSYLVINADESEPATCKDREIMRHDP 102
Query: 178 HTLVEGCLIAGKAMGAVAAYIYIRGEFYNEASNMQVAINEAYKAGFIGKNACGTGFDFDI 357
HTL+EG LIA AMGA AAYIYIRGEF E +Q AI+E Y AG +G+NA G+G+DFD+
Sbjct: 103 HTLIEGALIASFAMGAHAAYIYIRGEFIREREALQAAIDECYDAGLLGRNAAGSGWDFDL 162
Query: 358 FMHRGAGAYICGEETALIESIEGKQGKPRLKPPFPADIGLFGCPTTVSNVETVAVAPTIC 537
++H GAGAYICGEETAL+ES+EGK+G PR+KPPFPA GL+GCPTTV+NVE++AV PTI
Sbjct: 163 YLHHGAGAYICGEETALLESLEGKKGMPRMKPPFPAGAGLYGCPTTVNNVESIAVVPTIL 222
Query: 538 RRGGEWFAQFGRERNKGTKLFNISGHVNNPCTVEETMSIPLKALIEKHCHGIIGGWDNLL 717
RRG EWFA FGR N G KLF ++GHVN PC VEE MSIP++ LIEKH GI GGW NL
Sbjct: 223 RRGAEWFASFGRPNNAGVKLFGLTGHVNTPCVVEEAMSIPMRELIEKHGGGIRGGWKNLK 282
Query: 718 AVIPGGSSTPLIPKNVCDSVLMDFDSL 798
AVIPGG+S P++ C++ +MD+D +
Sbjct: 283 AVIPGGASCPVLTAEQCENAIMDYDGM 309
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,003,474
Number of Sequences: 369166
Number of extensions: 2332471
Number of successful extensions: 6323
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6284
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)