Planaria EST Database

DrC_00398

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00398
         (1197 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O02485|YDJ1_CAEEL  Hypothetical protein ZK1073.1 in chrom...   151   4e-36
sp|Q62433|NDRG1_MOUSE  NDRG1 protein (N-myc downstream regul...   122   3e-27
sp|Q92597|NDRG1_HUMAN  NDRG1 protein (N-myc downstream regul...   119   1e-26
sp|Q9UN36|NDRG2_HUMAN  NDRG2 protein (Syld709613 protein)         110   8e-24
sp|Q9UGV2|NDRG3_HUMAN  NDRG3 protein                              109   1e-23
sp|Q9QYG0|NDRG2_MOUSE  NDRG2 protein (Ndr2 protein)               107   5e-23
sp|Q9QYF9|NDRG3_MOUSE  NDRG3 protein (Ndr3 protein)               105   3e-22
sp|Q9ULP0|NDRG4_HUMAN  NDRG4 protein (Brain development-rela...   105   3e-22
sp|Q8BTG7|NDRG4_MOUSE  NDRG4 protein                              104   4e-22
sp|Q9Z2L9|NDRG4_RAT  NDRG4 protein (Brain development-relate...   102   2e-21

>sp|O02485|YDJ1_CAEEL Hypothetical protein ZK1073.1 in chromosome X
          Length = 325

 Score =  151 bits (381), Expect = 4e-36
 Identities = 100/334 (29%), Positives = 164/334 (49%), Gaps = 9/334 (2%)
 Frame = +2

Query: 2   LIMTTLNTKYCKTLTFYIEGTRSTN--EVAILTVHDIGCNHTQYVDFIKHSCMETLAPRC 175
           L M  +  + C  L  Y++G       +  ILTVHDIG NH  +V F+ H  M T+  + 
Sbjct: 6   LQMVVVQAQNCGVLHVYVQGNLEERGGKTIILTVHDIGTNHKSFVRFVNHPSMATVKEKA 65

Query: 176 VWFNVDLPGQGINDPDLPSDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARM 355
           ++ +V +PGQ  N  D   DF  PT+  I +DL   +    +   I FGEG GANI+ R 
Sbjct: 66  IFLHVCVPGQEDNSADFFGDF--PTLDGIGDDLSAVLDKFEVKSAIAFGEGVGANIICRF 123

Query: 356 AMTGDERILGAVLLNCVGSTPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNL 535
           AM    RI+G VL++C  +T  ++E  K+K++  +L    M+    +YL+ H+FG  +  
Sbjct: 124 AMGHPNRIMGIVLVHCTSTTAGIIEYCKEKVMNMRLENSIMSDGAWDYLLAHKFGGESKS 183

Query: 536 QSDEELSTMINNYKKFLRDTFNTKNLHGYVTSYMNRSNLIDKSMSIRCPM-----LFISG 700
           + +         Y + L+ T N KNL  Y+ ++  R++L   S +I   +     L ++G
Sbjct: 184 RQE---------YLEELKATLNPKNLSKYLVAFTKRTDL---SSTIGTKLETVDALLVTG 231

Query: 701 SLANYADDVKCLYEDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQ 880
           S A++   V   ++ +          K+    + +DN A+V+ E  D++A SL    +G 
Sbjct: 232 SKASHLHTVYTTHKSM---------NKKKTTLLVVDNVADVMQEAPDKLARSLILLCKGC 282

Query: 881 GLVG--SAPSRRMSSTVRPTGNRKISMEEYDSPK 976
           G++   + P      T+        SMEE D P+
Sbjct: 283 GVLSGVAIPGMERQRTL------SSSMEEADRPR 310

>sp|Q62433|NDRG1_MOUSE NDRG1 protein (N-myc downstream regulated gene 1 protein) (Protein
            Ndr1)
          Length = 394

 Score =  122 bits (305), Expect = 3e-27
 Identities = 93/335 (27%), Positives = 158/335 (47%), Gaps = 12/335 (3%)
 Frame = +2

Query: 59   GTRSTNEVAILTVHDIGCNH-TQYVDFIKHSCMETLAPRCVWFNVDLPGQGINDPDLPSD 235
            GT   N   ILT HDIG NH T Y        M+ +       +VD PGQ    P  P  
Sbjct: 50   GTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQHFAVCHVDAPGQQDGAPSFPVG 109

Query: 236  FTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVGST 415
            + YP+M Q+AE L   +    +  +I  G GAGA IL R A+   E + G VL+N     
Sbjct: 110  YMYPSMDQLAEMLPGVLHQFGLKSVIGMGTGAGAYILTRFALNNPEMVEGLVLMNVNPCA 169

Query: 416  PNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFG---VMNNLQSDEELSTMINNYKKFL 586
               ++    KI GW       T +  + +V H FG   + NN++       +++ Y++ +
Sbjct: 170  EGWMDWAASKISGW-------TQALPDMVVSHLFGKEEIHNNVE-------VVHTYRQHI 215

Query: 587  RDTFNTKNLHGYVTSYMNRSNL-IDKSM------SIRCPMLFISGSLANYADDVKCLYED 745
             +  N  NLH ++++Y +R +L I++ M      +++CP L + G  +   D V      
Sbjct: 216  LNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDNSPAVDAV------ 269

Query: 746  IQGFLKNDPDRKRHIEFMEIDNCANV-IVERTDQVAESLQYFLQGQGLVGSAPSRRMSST 922
            ++   K DP +      +++ +C  +  + +  ++AE+ +YF+QG G + SA   R+  +
Sbjct: 270  VECNSKLDPTK---TTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRS 326

Query: 923  VRPTGNRKISMEEYDSPKGPSNITYNPRRKYSESE 1027
               +G+   S+E     +  S+ +  PR +   SE
Sbjct: 327  RTASGSSVTSLE---GTRSRSHTSEGPRSRSHTSE 358

>sp|Q92597|NDRG1_HUMAN NDRG1 protein (N-myc downstream regulated gene 1 protein)
            (Differentiation-related gene 1 protein) (DRG1) (Reducing
            agents and tunicamycin-responsive protein) (RTP)
            (Nickel-specific induction protein Cap43) (Rit42)
          Length = 394

 Score =  119 bits (299), Expect = 1e-26
 Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
 Frame = +2

Query: 59   GTRSTNEVAILTVHDIGCNH-TQYVDFIKHSCMETLAPRCVWFNVDLPGQGINDPDLPSD 235
            GT   N   ILT HDIG NH T Y     +  M+ +       +VD PGQ       P+ 
Sbjct: 50   GTPKGNRPVILTYHDIGMNHKTCYNPLFNYEDMQEITQHFAVCHVDAPGQQDGAASFPAG 109

Query: 236  FTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVGST 415
            + YP+M Q+AE L   +    +  +I  G GAGA IL R A+   E + G VL+N     
Sbjct: 110  YMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCA 169

Query: 416  PNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEELSTMINNYKKFLRDT 595
               ++    KI GW       T +  + +V H FG    +QS+ E   +++ Y++ + + 
Sbjct: 170  EGWMDWAASKISGW-------TQALPDMVVSHLFG-KEEMQSNVE---VVHTYRQHIVND 218

Query: 596  FNTKNLHGYVTSYMNRSNL-IDKSM------SIRCPMLFISGSLANYADDVKCLYEDIQG 754
             N  NLH ++ +Y +R +L I++ M      +++CP L + G  +   D V      ++ 
Sbjct: 219  MNPGNLHLFINAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDSSPAVDAV------VEC 272

Query: 755  FLKNDPDRKRHIEFMEIDNCANV-IVERTDQVAESLQYFLQGQGLVGSAPSRRMSSTVRP 931
              K DP +      +++ +C  +  + +  ++AE+ +YF+QG G + SA   R+  +   
Sbjct: 273  NSKLDPTK---TTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTA 329

Query: 932  TGNRKISMEEYDSPKGPSNITYNPRRKYSESE 1027
            +G+   S+   D  +  S+ +   R +   SE
Sbjct: 330  SGS---SVTSLDGTRSRSHTSEGTRSRSHTSE 358

>sp|Q9UN36|NDRG2_HUMAN NDRG2 protein (Syld709613 protein)
          Length = 371

 Score =  110 bits (275), Expect = 8e-24
 Identities = 87/301 (28%), Positives = 144/301 (47%), Gaps = 8/301 (2%)
 Frame = +2

Query: 38  TLTFYIEGTRSTNEVAILTVHDIGCNHTQ-YVDFIKHSCMETLAPRCVWFNVDLPGQGIN 214
           ++TF + GT      AILT HD+G N+   +    +   M+ +    V  +VD PG    
Sbjct: 49  SVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEG 108

Query: 215 DPDLPSDFTYPTMQQIAEDLIECI-GMLSISHLIVFGEGAGANILARMAMTGDERILGAV 391
            P  P  + YP++ Q+A D+I C+   L+ S +I  G GAGA ILAR A+   + + G V
Sbjct: 109 APVFPLGYQYPSLDQLA-DMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLV 167

Query: 392 LLNCVGSTPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEEL---STM 562
           L+N   +    ++    K+        G+TSS    ++ H F       S EEL   S +
Sbjct: 168 LINIDPNAKGWMDWAAHKL-------TGLTSSIPEMILGHLF-------SQEELSGNSEL 213

Query: 563 INNYKKFLRDTFNTKNLHGYVTSYMNRSNLIDK---SMSIRCPMLFISGSLANYADDVKC 733
           I  Y+  +    N  N+  Y  SY NR +L  +    +++RCP++ + G  A + D V  
Sbjct: 214 IQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAV-- 271

Query: 734 LYEDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRM 913
               ++   K DP +   ++    D+     + +  ++ E+ +YFLQG G + S+   R+
Sbjct: 272 ----VECNSKLDPTQTSFLKM--ADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRL 325

Query: 914 S 916
           S
Sbjct: 326 S 326

>sp|Q9UGV2|NDRG3_HUMAN NDRG3 protein
          Length = 375

 Score =  109 bits (273), Expect = 1e-23
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 12/300 (4%)
 Frame = +2

Query: 53  IEGTRSTNEVAILTVHDIGCNHTQYVD-FIKHSCMETLAPRCVWFNVDLPGQGINDPDLP 229
           I G    N   ILT HDIG NH    + F     M+ +       +VD PGQ    P  P
Sbjct: 46  IRGLPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITQHFAVCHVDAPGQQEGAPSFP 105

Query: 230 SDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVG 409
           + + YPTM ++AE L   +  LS+  +I  G GAGA IL+R A+   E + G VL+N   
Sbjct: 106 TGYQYPTMDELAEMLPPVLTHLSLKSIIGIGVGAGAYILSRFALNHPELVEGLVLIN--- 162

Query: 410 STPNLVESLKDKIIGWKLSTI-GMTSSTENYLVVHRFGVMNNLQSDEELSTMINNYKKFL 586
                V+      I W  S + G+T++  + ++ H FG    LQ++ +L   I  Y+  +
Sbjct: 163 -----VDPCAKGWIDWAASKLSGLTTNVVDIILAHHFG-QEELQANLDL---IQTYRMHI 213

Query: 587 RDTFNTKNLHGYVTSYMNRSNL----------IDKSMSIRCPMLFISGSLANYADDVKCL 736
               N  NL  ++ SY  R +L           +KS +++C  L + G      D+   +
Sbjct: 214 AQDINQDNLQLFLNSYNGRRDLEIERPILGQNDNKSKTLKCSTLLVVG------DNSPAV 267

Query: 737 YEDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRMS 916
              ++   + +P     ++  +      V+  +  ++ E+ +YFLQG G + SA   R++
Sbjct: 268 EAVVECNSRLNPINTTLLKMADCGGLPQVV--QPGKLTEAFKYFLQGMGYIPSASMTRLA 325

>sp|Q9QYG0|NDRG2_MOUSE NDRG2 protein (Ndr2 protein)
          Length = 371

 Score =  107 bits (268), Expect = 5e-23
 Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 8/301 (2%)
 Frame = +2

Query: 38  TLTFYIEGTRSTNEVAILTVHDIGCNHTQ-YVDFIKHSCMETLAPRCVWFNVDLPGQGIN 214
           ++TF + GT      AI T HD+G N+   +    +   M+ +    V  +VD PG    
Sbjct: 49  SVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVHVDAPGMEEG 108

Query: 215 DPDLPSDFTYPTMQQIAEDLIECI-GMLSISHLIVFGEGAGANILARMAMTGDERILGAV 391
            P  P  + YP++ Q+A D+I CI   L+ S +I  G GAGA IL+R A+   + + G V
Sbjct: 109 APVFPLGYQYPSLDQLA-DMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLV 167

Query: 392 LLNCVGSTPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEEL---STM 562
           L+N   +    ++    K+        G+TSS  + ++ H F       S EEL   S +
Sbjct: 168 LINIDPNAKGWMDWAAHKL-------TGLTSSIPDMILGHLF-------SQEELSGNSEL 213

Query: 563 INNYKKFLRDTFNTKNLHGYVTSYMNRSNLIDK---SMSIRCPMLFISGSLANYADDVKC 733
           I  Y+  ++   N +N+  Y  SY NR +L  +     +++CP++ + G  A + D V  
Sbjct: 214 IQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHEDAV-- 271

Query: 734 LYEDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRM 913
               ++   K DP +   ++    D+     + +  ++ E+ +YFLQG G + S+   R+
Sbjct: 272 ----VECNSKLDPTQTSFLKM--ADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRL 325

Query: 914 S 916
           S
Sbjct: 326 S 326

>sp|Q9QYF9|NDRG3_MOUSE NDRG3 protein (Ndr3 protein)
          Length = 375

 Score =  105 bits (262), Expect = 3e-22
 Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 12/300 (4%)
 Frame = +2

Query: 53  IEGTRSTNEVAILTVHDIGCNHTQ-YVDFIKHSCMETLAPRCVWFNVDLPGQGINDPDLP 229
           I G    N   ILT HDIG NH   +  F     M+ +       +VD PGQ    P  P
Sbjct: 46  IRGLPKGNRPVILTYHDIGLNHKSCFNTFFNFEDMQEITQHFAVCHVDAPGQQEAAPSFP 105

Query: 230 SDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVG 409
           + + YPTM ++AE L   +  LS+  +I  G GAGA IL+R A+   E + G VL+N   
Sbjct: 106 TGYQYPTMDELAEMLPPVLTHLSMKSIIGIGVGAGAYILSRFALNHPELVEGLVLIN--- 162

Query: 410 STPNLVESLKDKIIGWKLSTI-GMTSSTENYLVVHRFGVMNNLQSDEELSTMINNYKKFL 586
                ++      I W  S + G T++  + ++ H FG    LQ++ +L   I  Y+  +
Sbjct: 163 -----IDPCAKGWIDWAASKLSGFTTNIVDIILAHHFG-QEELQANLDL---IQTYRLHI 213

Query: 587 RDTFNTKNLHGYVTSYMNRSNL----------IDKSMSIRCPMLFISGSLANYADDVKCL 736
               N +NL  ++ SY  R +L           ++  +++C  L + G      D+   +
Sbjct: 214 AQDINQENLQLFLGSYNGRRDLEIERPILGQNDNRLKTLKCSTLLVVG------DNSPAV 267

Query: 737 YEDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRMS 916
              ++   + DP     ++  +      V+  +  ++ E+ +YFLQG G + SA   R++
Sbjct: 268 EAVVECNSRLDPINTTLLKMADCGGLPQVV--QPGKLTEAFKYFLQGMGYIPSASMTRLA 325

>sp|Q9ULP0|NDRG4_HUMAN NDRG4 protein (Brain development-related molecule 1) (Vascular
           smooth muscle cell associated protein 8) (SMAP-8)
          Length = 352

 Score =  105 bits (261), Expect = 3e-22
 Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 11/307 (3%)
 Frame = +2

Query: 53  IEGTRSTNEVAILTVHDIGCNHTQ-YVDFIKHSCMETLAPRCVWFNVDLPGQGINDPDLP 229
           I G+   N  AILT HD+G NH   +  F     M+ +    V  +VD PGQ +     P
Sbjct: 22  IRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFP 81

Query: 230 SDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVG 409
             + +P+M+Q+A  L   +      ++I  G GAGA +LA+ A+   + + G VL+N   
Sbjct: 82  QGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLVNIDP 141

Query: 410 STPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEEL---STMINNYKK 580
           +    ++    K+        G+TS+  + ++ H F       S EEL   + ++ +Y++
Sbjct: 142 NGKGWIDWAATKL-------SGLTSTLPDTVLSHLF-------SQEELVNNTELVQSYRQ 187

Query: 581 FLRDTFNTKNLHGYVTSY-------MNRSNLIDKSMSIRCPMLFISGSLANYADDVKCLY 739
            + +  N  NL  +   Y       +NR   +  + ++RCP++ + G  A   D V    
Sbjct: 188 QIGNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGV---- 243

Query: 740 EDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRMSS 919
             ++   K DP     ++  +        V +  ++ E+ +YFLQG G +     RR+S 
Sbjct: 244 --VECNSKLDPTTTTFLKMADSGGLPQ--VTQPGKLTEAFKYFLQGMGYIAYLKDRRLSG 299

Query: 920 TVRPTGN 940
              P+ +
Sbjct: 300 GAVPSAS 306

>sp|Q8BTG7|NDRG4_MOUSE NDRG4 protein
          Length = 352

 Score =  104 bits (260), Expect = 4e-22
 Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 11/307 (3%)
 Frame = +2

Query: 53  IEGTRSTNEVAILTVHDIGCNHTQ-YVDFIKHSCMETLAPRCVWFNVDLPGQGINDPDLP 229
           I G+   N  AILT HD+G NH   +  F     M+ +    V  +VD PGQ +     P
Sbjct: 22  IRGSPKGNRPAILTYHDVGLNHKLCFNTFFNFEDMQEITKHFVVCHVDAPGQQVGASQFP 81

Query: 230 SDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVG 409
             + +P+M+Q+A  L   +      ++I  G GAGA +LA+ A+   + + G VL+N   
Sbjct: 82  QGYQFPSMEQLAAMLPSVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDP 141

Query: 410 STPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEEL---STMINNYKK 580
           +    ++    K+        G+TS+  + ++ H F       S EEL   + ++ +Y++
Sbjct: 142 NGKGWIDWAATKL-------SGLTSTLPDTVLSHLF-------SQEELVNNTELVQSYRQ 187

Query: 581 FLRDTFNTKNLHGYVTSY-------MNRSNLIDKSMSIRCPMLFISGSLANYADDVKCLY 739
            + +  N  NL  +   Y       +NR   +  + ++RCP++ + G  A   + V    
Sbjct: 188 QISNVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEEGV---- 243

Query: 740 EDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRMSS 919
             ++   K DP     ++  +        V +  ++ E+ +YFLQG G +     RR+S 
Sbjct: 244 --VECNSKLDPTTTTFLKMADSGGLPQ--VTQPGKLTEAFKYFLQGMGYIAHLKDRRLSG 299

Query: 920 TVRPTGN 940
              P+ +
Sbjct: 300 GAVPSAS 306

>sp|Q9Z2L9|NDRG4_RAT NDRG4 protein (Brain development-related molecule 1)
          Length = 352

 Score =  102 bits (255), Expect = 2e-21
 Identities = 77/307 (25%), Positives = 139/307 (45%), Gaps = 11/307 (3%)
 Frame = +2

Query: 53  IEGTRSTNEVAILTVHDIGCNHTQYVDFIKH-SCMETLAPRCVWFNVDLPGQGINDPDLP 229
           I G+   N  AILT HD+G NH    + + +   M+ +    V  +VD PGQ +     P
Sbjct: 22  IRGSPKGNRPAILTYHDVGLNHKLCFNTLFNLEDMQEITKHFVVCHVDAPGQQVGASQFP 81

Query: 230 SDFTYPTMQQIAEDLIECIGMLSISHLIVFGEGAGANILARMAMTGDERILGAVLLNCVG 409
             + +P+M+Q+A  L   +      ++I  G GAGA +LA+ A+   + + G VL+N   
Sbjct: 82  QGYQFPSMEQLATMLPNVVQHFGFKYVIGIGVGAGAYVLAKFALIFPDLVEGLVLMNIDP 141

Query: 410 STPNLVESLKDKIIGWKLSTIGMTSSTENYLVVHRFGVMNNLQSDEEL---STMINNYKK 580
           +    ++    K+        G+TS+  + ++ H F       S EEL   + ++ +Y++
Sbjct: 142 NGKGWIDWAATKL-------SGLTSTLPDTVLSHLF-------SQEELVNNTELVQSYRQ 187

Query: 581 FLRDTFNTKNLHGYVTSY-------MNRSNLIDKSMSIRCPMLFISGSLANYADDVKCLY 739
            +    N  NL  +   Y       +NR   +  + ++RCP++ + G  A   D V    
Sbjct: 188 QISSVVNQANLQLFWNMYNSRRDLDINRPGTVPNAKTLRCPVMLVVGDNAPAEDGV---- 243

Query: 740 EDIQGFLKNDPDRKRHIEFMEIDNCANVIVERTDQVAESLQYFLQGQGLVGSAPSRRMSS 919
             ++   K DP     ++  +        V +  ++ E+ +YFLQG G +     RR+S 
Sbjct: 244 --VECNSKLDPTTTTFLKMADSGGLPQ--VTQPGKLTEAFKYFLQGMGYIAHLKDRRLSG 299

Query: 920 TVRPTGN 940
              P+ +
Sbjct: 300 GAVPSAS 306

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,228,568
Number of Sequences: 369166
Number of extensions: 2720245
Number of successful extensions: 6455
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6431
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13531778625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00398

  1. Dr_sW_023_L02
  2. Dr_sW_010_L01
  3. Dr_sW_007_N15
  4. Dr_sW_002_I13
  5. Dr_sW_025_N18