DrC_00099
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00099 (860 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q9NQ34|CK015_HUMAN Protein C11orf15 precursor 58 3e-08 sp|Q9JJR8|CK015_MOUSE Protein C11orf15 homolog 57 7e-08 sp|Q9P0T7|TMEM9_HUMAN Transmembrane protein 9 precursor (De... 53 1e-06 sp|Q9CR23|TMEM9_MOUSE Transmembrane protein 9 precursor 52 2e-06 sp|O73698|PUT2_FUGRU Putative protein 2 (PUT2) 51 5e-06 sp|Q9VNA4|Y1161_DROME Hypothetical protein CG1161 37 0.054 sp|P05166|PCCB_HUMAN Propionyl-CoA carboxylase beta chain, ... 31 5.1
>sp|Q9NQ34|CK015_HUMAN Protein C11orf15 precursor Length = 198 Score = 58.2 bits (139), Expect = 3e-08 Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 8/239 (3%) Frame = +1 Query: 112 ISILFFVVNVKAAYN--EYRCKCICNLPNVSKNVSTLAKKVFIQSVDSENCRCRYMMPDM 285 +S+L AA N + RCKCIC P +N + ++ +++ ++C C +++ M Sbjct: 22 LSVLLLAQLSDAAKNFEDVRCKCIC--PPYKEN----SGHIYNKNISQKDCDCLHVVEPM 75 Query: 286 D------EKSCLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYLFVLQFIDAVCKKKSDT 447 E CLRCECKY+ R + ++ L +Y+ L ++ + K++ Sbjct: 76 PVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMVYLTLVEPILKRRLF- 134 Query: 448 NFMIKMNASRSVSSPGAIKIVKHEDKSNSISMKSNEFDNFDDLPFASRDQLQASISEGGD 627 G ++++ +D D D PFA+ + A Sbjct: 135 ---------------GHAQLIQSDD------------DIGDHQPFANAHDVLA------- 160 Query: 628 TNFGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVFHDHSILN 804 +S + ++V+N+ Y Q RW+ V+ QR VF H +L+ Sbjct: 161 ---------------------RSRSRANVLNKVEYAQQRWKLQVQEQRKSVFDRHVVLS 198
>sp|Q9JJR8|CK015_MOUSE Protein C11orf15 homolog Length = 199 Score = 57.0 bits (136), Expect = 7e-08 Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 8/239 (3%) Frame = +1 Query: 112 ISILFFVVNVKAAYN--EYRCKCICNLPNVSKNVSTLAKKVFIQSVDSENCRCRYMMPDM 285 +S+L AA N + RCKCIC P +N + K ++ ++C C +++ M Sbjct: 23 LSVLLLAQLTGAAKNFEDVRCKCIC--PPYKENPGHIYNK----NISQKDCDCLHVVEPM 76 Query: 286 D------EKSCLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYLFVLQFIDAVCKKKSDT 447 E CLRCECKY+ R + ++ L +Y+ L ++ + K++ Sbjct: 77 PVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMVYLTLVEPILKRRLF- 135 Query: 448 NFMIKMNASRSVSSPGAIKIVKHEDKSNSISMKSNEFDNFDDLPFASRDQLQASISEGGD 627 G ++++ +D D D PFA+ + A Sbjct: 136 ---------------GHSQLLQSDD------------DVGDHQPFANAHDVLA------- 161 Query: 628 TNFGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVFHDHSILN 804 +S + ++V+N+ Y Q RW+ V+ QR VF H +L+ Sbjct: 162 ---------------------RSRSRANVLNKVEYAQQRWKLQVQEQRKSVFDRHVVLS 199
>sp|Q9P0T7|TMEM9_HUMAN Transmembrane protein 9 precursor (Dermal papilla derived protein 4) Length = 183 Score = 52.8 bits (125), Expect = 1e-06 Identities = 58/247 (23%), Positives = 94/247 (38%), Gaps = 10/247 (4%) Frame = +1 Query: 94 MKIIFWISILFFVVNVKAAYN----EYRCKCICNLPNVSKNVSTLAKKVFIQSVDSENCR 261 MK++ ++++ ++ A N + RCKCIC +N+S ++ Q+V ++C Sbjct: 1 MKLLSLVAVVGCLLVPPAEANKSSEDIRCKCICP---PYRNISG---HIYNQNVSQKDCN 54 Query: 262 CRYMMPDMD------EKSCLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYLFVLQFIDA 423 C +++ M E CL CEC+Y+ R T ++ L +Y+ L +D Sbjct: 55 CLHVVEPMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDP 114 Query: 424 VCKKKSDTNFMIKMNASRSVSSPGAIKIVKHEDKSNSISMKSNEFDNFDDLPFASRDQLQ 603 + +K P A H NE +N D +R Sbjct: 115 LIRK------------------PDAYTEQLH-----------NEEENED-----ARSMAA 140 Query: 604 ASISEGGDTNFGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVF 783 A+ S GG PR T V+ R Q RW+ V+ QR VF Sbjct: 141 AAASLGG-----------------PRANT-------VLERVEGAQQRWKLQVQEQRKTVF 176 Query: 784 HDHSILN 804 H +L+ Sbjct: 177 DRHKMLS 183
>sp|Q9CR23|TMEM9_MOUSE Transmembrane protein 9 precursor Length = 183 Score = 52.4 bits (124), Expect = 2e-06 Identities = 58/247 (23%), Positives = 94/247 (38%), Gaps = 10/247 (4%) Frame = +1 Query: 94 MKIIFWISILFFVVNVKAAYN----EYRCKCICNLPNVSKNVSTLAKKVFIQSVDSENCR 261 MK++ ++++ ++ A N + RCKCIC +N+S ++ Q+V ++C Sbjct: 1 MKLLCLVAVVGCLLVPPAQANKSSEDIRCKCICP---PYRNISG---HIYNQNVSQKDCN 54 Query: 262 CRYMMPDMD------EKSCLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYLFVLQFIDA 423 C +++ M E CL CEC+Y+ R T ++ L +Y+ L +D Sbjct: 55 CLHVVEPMPVPGHDVEAYCLLCECRYEERSTTTIKVIIVIYLSVVGALLLYMAFLMLVDP 114 Query: 424 VCKKKSDTNFMIKMNASRSVSSPGAIKIVKHEDKSNSISMKSNEFDNFDDLPFASRDQLQ 603 + +K P A H NE +N D +R Sbjct: 115 LIRK------------------PDAYTEQLH-----------NEEENED-----ARTMAT 140 Query: 604 ASISEGGDTNFGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVF 783 A+ S GG PR T V+ R Q RW+ V+ QR VF Sbjct: 141 AAASIGG-----------------PRANT-------VLERVEGAQQRWKLQVQEQRKTVF 176 Query: 784 HDHSILN 804 H +L+ Sbjct: 177 DRHKMLS 183
>sp|O73698|PUT2_FUGRU Putative protein 2 (PUT2) Length = 187 Score = 50.8 bits (120), Expect = 5e-06 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Frame = +1 Query: 91 FMKIIFWISILFFVVNVKA----AYNEYRCKCICNLPNVSKNVSTLAKKVFIQSVDSENC 258 +M F + LF + NV ++++ RCKCIC +N+S ++ ++ ++C Sbjct: 9 WMLAAFALMTLFLLDNVGVTQAKSFDDVRCKCICP---PYRNISG---HIYNRNFTQKDC 62 Query: 259 RCRYMMPDMD------EKSCLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYLFVLQFID 420 C +++ M E CL CECKY+ R T + L +Y+ L +D Sbjct: 63 NCLHVVDPMPVPGNDVEAYCLLCECKYEERSTNTIRVTIIIFLSVVGALLLYMLFLLLVD 122 Query: 421 AVCKK 435 + +K Sbjct: 123 PLIRK 127
>sp|Q9VNA4|Y1161_DROME Hypothetical protein CG1161 Length = 227 Score = 37.4 bits (85), Expect = 0.054 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 6/195 (3%) Frame = +1 Query: 238 SVDSENCRCR-YMMPDMDEKS-----CLRCECKYQSRKTKIMEXXXXXXXXXXXGLTIYL 399 S + C C ++P +D C C+C + +R T +++ L IY+ Sbjct: 92 SSSTTECVCAGALLPRLDANGKELPICAECKCSHVARNTTLIKVVVIIVIWIISILVIYM 151 Query: 400 FVLQFIDAVCKKKSDTNFMIKMNASRSVSSPGAIKIVKHEDKSNSISMKSNEFDNFDDLP 579 L +D + K+ N+ N + P LP Sbjct: 152 LFLMCLDPLLNKRVKANYQEHTNEDDEPTPP---------------------------LP 184 Query: 580 FASRDQLQASISEGGDTNFGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTV 759 + +L A ++V+NR ++QD+W+ V Sbjct: 185 AVNNQELSA--------------------------------RANVLNRVGHQQDKWKRQV 212 Query: 760 KMQRDRVFHDHSILN 804 + QR ++ H++LN Sbjct: 213 REQRRHIYDRHTMLN 227
>sp|P05166|PCCB_HUMAN Propionyl-CoA carboxylase beta chain, mitochondrial precursor (PCCase beta subunit) (Propanoyl-CoA:carbon dioxide ligase beta subunit) Length = 539 Score = 30.8 bits (68), Expect = 5.1 Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 23/124 (18%) Frame = +1 Query: 439 SDTNFMIKMNASRSVSSPGAIKIVKHEDKS----------------------NSISMKSN 552 +D FM+K + ++ P +K V +ED + N + N Sbjct: 211 TDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDALCN 270 Query: 553 EFDNFDDLPFASRDQLQASISEGGDTNFGSITCRKPD-DTVTPRMRTKSEAMSDVVNRAR 729 D F+ LP +S+D AS+ E D + + P+ DT+ P TK+ M D+++ Sbjct: 271 LRDFFNYLPLSSQD--PASVRECHDPSDRLV----PELDTIVPLESTKAYNMVDIIHSVV 324 Query: 730 YEQD 741 E++ Sbjct: 325 DERE 328
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,949,610
Number of Sequences: 369166
Number of extensions: 1880691
Number of successful extensions: 4291
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4284
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
