Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_H06
(231 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9VNA4|Y1161_DROME Hypothetical protein CG1161 37 0.011
sp|O73698|PUT2_FUGRU Putative protein 2 (PUT2) 29 3.9
sp|Q13418|ILK1_HUMAN Integrin-linked protein kinase 1 (ILK-... 28 6.7
sp|P57043|ILK2_HUMAN Integrin-linked protein kinase 2 (ILK-2) 28 6.7
sp|P57044|ILK_CAVPO Integrin-linked protein kinase (Beta-in... 28 6.7
sp|O55222|ILK_MOUSE Integrin-linked protein kinase 28 6.7
sp|P23665|GUNA_FIBSU Endoglucanase A precursor (Endo-1,4-be... 28 8.7
>sp|Q9VNA4|Y1161_DROME Hypothetical protein CG1161
Length = 227
Score = 37.4 bits (85), Expect = 0.011
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 DDTVTPRM----RTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVFHDHSILN 175
DD TP + + A ++V+NR ++QD+W+ V+ QR ++ H++LN
Sbjct: 176 DDEPTPPLPAVNNQELSARANVLNRVGHQQDKWKRQVREQRRHIYDRHTMLN 227
>sp|O73698|PUT2_FUGRU Putative protein 2 (PUT2)
Length = 187
Score = 28.9 bits (63), Expect = 3.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 35 DTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQRDRVFHDHSIL 172
+ + P+M + V+ R Q RW+ V+ QR VF H +L
Sbjct: 142 EDIQPQMSGDPARGNTVLERVEGAQQRWKKQVQEQRKTVFDRHKML 187
>sp|Q13418|ILK1_HUMAN Integrin-linked protein kinase 1 (ILK-1) (59 kDa
serine/threonine-protein kinase) (p59ILK)
Length = 452
Score = 28.1 bits (61), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 FGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQ-RDRVFHDHS 166
+G + K + +R ++E M +NR Y+ W+GT + + R+ + HS
Sbjct: 132 YGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTTRTRPRNGTLNKHS 186
>sp|P57043|ILK2_HUMAN Integrin-linked protein kinase 2 (ILK-2)
Length = 452
Score = 28.1 bits (61), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 FGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQ-RDRVFHDHS 166
+G + K + +R ++E M +NR Y+ W+GT + + R+ + HS
Sbjct: 132 YGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTTRTRPRNGTLNKHS 186
>sp|P57044|ILK_CAVPO Integrin-linked protein kinase (Beta-integrin-linked kinase)
Length = 451
Score = 28.1 bits (61), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 FGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQ-RDRVFHDHS 166
+G + K + +R ++E M +NR Y+ W+GT + + R+ + HS
Sbjct: 132 YGEMPMDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTTRTRPRNGTLNKHS 186
>sp|O55222|ILK_MOUSE Integrin-linked protein kinase
Length = 452
Score = 28.1 bits (61), Expect = 6.7
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 FGSITCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRWRGTVKMQ-RDRVFHDHS 166
+G + K + +R ++E M +NR Y+ W+GT + + R+ + HS
Sbjct: 132 YGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKDTFWKGTTRTRPRNGTLNKHS 186
>sp|P23665|GUNA_FIBSU Endoglucanase A precursor (Endo-1,4-beta-glucanase) (Cellulase)
Length = 453
Score = 27.7 bits (60), Expect = 8.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 17 TCRKPDDTVTPRMRTKSEAMSDVVNRARYEQDRW 118
T RKP T TP K + D++ RYE D W
Sbjct: 118 TTRKP--TTTPMKSGKPNKVRDLLEELRYEADFW 149
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,375,583
Number of Sequences: 369166
Number of extensions: 316372
Number of successful extensions: 688
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 68,354,980
effective HSP length: 47
effective length of database: 59,672,435
effective search space used: 1730500615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)