Planaria EST Database

DrC_01127

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01127
         (972 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q60HF9|FUMH_MACFA  Fumarate hydratase, mitochondrial prec...   310   4e-84
sp|P07954|FUMH_HUMAN  Fumarate hydratase, mitochondrial prec...   309   7e-84
sp|P93033|FUM1_ARATH  Fumarate hydratase 1, mitochondrial pr...   309   9e-84
sp|Q9FI53|FUM2_ARATH  Fumarate hydratase 2, chloroplast prec...   309   9e-84
sp|P97807|FUMH_MOUSE  Fumarate hydratase, mitochondrial prec...   309   9e-84
sp|P14408|FUMH_RAT  Fumarate hydratase, mitochondrial precur...   308   1e-83
sp|P55250|FUMH_RHIOR  Fumarate hydratase, mitochondrial prec...   305   2e-82
sp|Q9ZCQ4|FUMC_RICPR  Fumarate hydratase class II (Fumarase C)    304   3e-82
sp|Q92GW0|FUMC_RICCN  Fumarate hydratase class II (Fumarase C)    303   5e-82
sp|P10173|FUMH_PIG  Fumarate hydratase, mitochondrial (Fumar...   303   6e-82

>sp|Q60HF9|FUMH_MACFA Fumarate hydratase, mitochondrial precursor (Fumarase)
          Length = 510

 Score =  310 bits (794), Expect = 4e-84
 Identities = 158/297 (53%), Positives = 205/297 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EFA++IKIGRTH QDAVPLT+GQE S Y+ Q+ Y + RI  ++     +LA      
Sbjct: 221  KSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAVTRIKAAMP-RIYELAAGGTAV 279

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     F  +V  ++             F  A NKF  L AHD+L+ ++G +NT A 
Sbjct: 280  GTGLNTRIGFAEKVAAKVAALTG------LPFVTAPNKFEALAAHDALVELSGAMNTTAC 333

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPR G+GE +LPENEPGSSIMPGK+NPTQCE+M+MV AQVMGN+VA
Sbjct: 334  SLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVA 393

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP++I N+LHS +LL D S  F + CV G+  NT +IN  +N+SL
Sbjct: 394  VTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESL 453

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+IAK AHKN  +LKE A++L  ++ E FD+W+ P  M+ PK
Sbjct: 454  MLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 510

>sp|P07954|FUMH_HUMAN Fumarate hydratase, mitochondrial precursor (Fumarase)
          Length = 510

 Score =  309 bits (792), Expect = 7e-84
 Identities = 158/297 (53%), Positives = 205/297 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EFA++IKIGRTH QDAVPLT+GQE S Y+ Q+ Y + RI  ++     +LA      
Sbjct: 221  KSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMP-RIYELAAGGTAV 279

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     F  +V  ++             F  A NKF  L AHD+L+ ++G +NT A 
Sbjct: 280  GTGLNTRIGFAEKVAAKVAALTG------LPFVTAPNKFEALAAHDALVELSGAMNTTAC 333

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPR G+GE +LPENEPGSSIMPGK+NPTQCE+M+MV AQVMGN+VA
Sbjct: 334  SLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVA 393

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP++I N+LHS +LL D S  F + CV G+  NT +IN  +N+SL
Sbjct: 394  VTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESL 453

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+IAK AHKN  +LKE A++L  ++ E FD+W+ P  M+ PK
Sbjct: 454  MLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 510

>sp|P93033|FUM1_ARATH Fumarate hydratase 1, mitochondrial precursor (Fumarase 1)
          Length = 492

 Score =  309 bits (791), Expect = 9e-84
 Identities = 154/296 (52%), Positives = 205/296 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EF  ++KIGRTH QDA PLT+GQE   Y +Q+ Y +NR++ ++     QLA      
Sbjct: 202  KSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVKYGLNRVTCTLP-RLYQLAQGGTAV 260

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     FDV++   + E           F  A+NKF  L AHD+ +  +G LNT+AT
Sbjct: 261  GTGLNTKKGFDVKIAAAVAEETN------LPFVTAENKFEALAAHDACVETSGSLNTIAT 314

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPRCG+GE +LPENEPGSSIMPGK+NPTQCE+++MVCAQVMGN+VA
Sbjct: 315  SLMKIANDIRFLGSGPRCGLGELVLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVA 374

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP+I + LLHS++L+AD S  F K CV G+  N  +I+  +++SL
Sbjct: 375  VTVGGSNGHFELNVFKPVIASALLHSVRLIADASASFEKNCVRGIEANRERISKLLHESL 434

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISP 889
            MLVT+LN  IGYD +A +AK AHK  C+LKEAA+ L +++ E+FD  + P KMI P
Sbjct: 435  MLVTSLNPKIGYDNAAAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLVVPEKMIGP 490

>sp|Q9FI53|FUM2_ARATH Fumarate hydratase 2, chloroplast precursor (Fumarase 2)
          Length = 499

 Score =  309 bits (791), Expect = 9e-84
 Identities = 155/296 (52%), Positives = 205/296 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EF  ++KIGRTH QDA PLT+GQE   Y +Q++Y +NR++ ++     QLA      
Sbjct: 209  KSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVEYGLNRVACTLP-RIYQLAQGGTAV 267

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     FDV++   + E           F  A+NKF  L AHD+ +  +G LNT+AT
Sbjct: 268  GTGLNTKKGFDVKIAAAVAEETN------LPFVTAENKFEALAAHDACVETSGSLNTIAT 321

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPRCG+GE  LPENEPGSSIMPGK+NPTQCE+++MVCAQVMGN+VA
Sbjct: 322  SLMKIANDIRFLGSGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVA 381

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            ++IG S G+ ELNV+KP+I + LLHSI+L+AD S  F K CV G+  N  +I+  +++SL
Sbjct: 382  VTIGGSNGHFELNVFKPVIASALLHSIRLIADASASFEKNCVRGIEANRERISKLLHESL 441

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISP 889
            MLVT+LN  IGYD +A +AK AHK  C+LK AA++L +++ E+FD  + P KMI P
Sbjct: 442  MLVTSLNPKIGYDNAAAVAKRAHKEGCTLKHAAMKLGVLTSEEFDTLVVPEKMIGP 497

>sp|P97807|FUMH_MOUSE Fumarate hydratase, mitochondrial precursor (Fumarase) (EF-3)
          Length = 507

 Score =  309 bits (791), Expect = 9e-84
 Identities = 159/297 (53%), Positives = 205/297 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EFA+VIKIGRTH QDAVPLT+GQE S Y+ Q+ Y + RI  ++     +LA      
Sbjct: 218  KSKEFAQVIKIGRTHTQDAVPLTLGQEFSGYVQQVQYAMVRIKAAMP-RIYELAAGGTAV 276

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     F  +V  ++             F  A NKF  L AHD+L+ ++G +NT A 
Sbjct: 277  GTGLNTRIGFAEKVAAKVAALTG------LPFVTAPNKFEALAAHDALVELSGAMNTAAC 330

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPR G+GE +LPENEPGSSIMPGK+NPTQCE+M+MV AQVMGN+VA
Sbjct: 331  SLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVA 390

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP++I N+LHS +LL D S  F + CV G+  NT +IN  +N+SL
Sbjct: 391  VTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESL 450

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+IAK AHKN  +LKE A++L  ++ E FD+W+ P  M+ PK
Sbjct: 451  MLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGPK 507

>sp|P14408|FUMH_RAT Fumarate hydratase, mitochondrial precursor (Fumarase)
          Length = 507

 Score =  308 bits (790), Expect = 1e-83
 Identities = 158/297 (53%), Positives = 205/297 (69%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EFA+VIKIGRTH QDAVPLT+GQE S Y+ Q+ Y + RI  ++     +LA      
Sbjct: 218  KSKEFAQVIKIGRTHTQDAVPLTLGQEFSGYVQQVQYAMERIKAAMP-RIYELAAGGTAV 276

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     F  +V  ++             F  A NKF  L AHD+L+ ++G +NT A 
Sbjct: 277  GTGLNTRIGFAEKVAAKVAALTG------LPFVTAPNKFEALAAHDALVELSGAMNTTAC 330

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPR G+GE +LPENEPGSSIMPGK+NPTQCE+M+MV AQVMGN+VA
Sbjct: 331  SLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVA 390

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP++I N+LHS +LL D S  F + CV G+  NT +IN  +N+SL
Sbjct: 391  VTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESL 450

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+IAK AHKN  +LK+ A++L  ++ E FD+W+ P  M+ PK
Sbjct: 451  MLVTALNPHIGYDKAAKIAKTAHKNGSTLKKTAIELGYLTAEQFDEWVKPKDMLGPK 507

>sp|P55250|FUMH_RHIOR Fumarate hydratase, mitochondrial precursor (Fumarase)
          Length = 494

 Score =  305 bits (780), Expect = 2e-82
 Identities = 159/297 (53%), Positives = 199/297 (67%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EF  +IKIGRTH+QDA PLT+GQE S Y  QL Y I R+  +++     LA      
Sbjct: 204  KSAEFEHIIKIGRTHLQDATPLTLGQEFSGYTQQLTYGIARVQGTLE-RLYNLAQGGTAV 262

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     FD +V + I             F  A NKF  L AHD+L+   G LNT+A 
Sbjct: 263  GTGLNTRKGFDAKVAEAIASITG------LPFKTAPNKFEALAAHDALVEAHGALNTVAC 316

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND R+LGSGPRCG+GE  LPENEPGSSIMPGK+NPTQCE+M+MVCAQVMGN  A
Sbjct: 317  SLMKIANDIRYLGSGPRCGLGELSLPENEPGSSIMPGKVNPTQCEAMTMVCAQVMGNNTA 376

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            IS+  S G  ELNV+KP++I NL+ SI+L++D S  F K CV G+  N  +I++ +N+SL
Sbjct: 377  ISVAGSNGQFELNVFKPVMIKNLIQSIRLISDASISFTKNCVVGIEANEKKISSIMNESL 436

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+ AK AHK   +LKEAA+ L  ++ E+FD+W+ P  MIS K
Sbjct: 437  MLVTALNPHIGYDKAAKCAKKAHKEGTTLKEAALSLGYLTSEEFDQWVRPEDMISAK 493

>sp|Q9ZCQ4|FUMC_RICPR Fumarate hydratase class II (Fumarase C)
          Length = 461

 Score =  304 bits (778), Expect = 3e-82
 Identities = 159/295 (53%), Positives = 207/295 (70%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  ++ K+IKIGRTH+QDA PLT+ QE S YI+Q++Y + RI +++K     LA      
Sbjct: 174  KSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALK-KVYLLAQGGTAV 232

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     FD++  Q++ E  ++       F  A NKF  L AHD+L+  +G LNT+A 
Sbjct: 233  GTGINSKIGFDIKFAQKVAEFTQQ------PFKTAPNKFESLAAHDALVEFSGTLNTIAV 286

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND R LGSGPRCG+GE  LPENEPGSSIMPGK+NPTQ E+++MVC QVMGN+V 
Sbjct: 287  SLMKIANDIRLLGSGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVT 346

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            ++I  S G+LELNV+KP+II N+L SI+LL+D    FV +CV GL  N A+INT  ++SL
Sbjct: 347  VTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSL 406

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMIS 886
            MLVT LN HIGYD +A+IAK AHK   +LKEAA +L  +S+E+FDK + P KMIS
Sbjct: 407  MLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMIS 461

>sp|Q92GW0|FUMC_RICCN Fumarate hydratase class II (Fumarase C)
          Length = 463

 Score =  303 bits (776), Expect = 5e-82
 Identities = 158/295 (53%), Positives = 208/295 (70%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  ++ K+IKIGRTH+QDA PLT+ QE S YI+Q++Y + RI N+++     LA      
Sbjct: 174  KSKDWDKIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIENALQ-KVYLLAQGGTAV 232

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     FD++  +++ E  K+       F  A NKF  L AHD+L+  +G LNT+A 
Sbjct: 233  GTGINSKIGFDIKFAEKVAEFTKQ------PFKTAPNKFESLAAHDALVEFSGTLNTIAV 286

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND R LGSGPRCG+GE  LPENEPGSSIMPGK+NPTQ E+++MVC+QVMGN+V 
Sbjct: 287  SLMKIANDIRLLGSGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCSQVMGNHVT 346

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            ++I  S G+LELNV+KP+II N+L SI+LL+D    FV +CV GL  N A+IN   ++SL
Sbjct: 347  VTIAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINDLRDKSL 406

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMIS 886
            MLVTALN HIGYD +A+IAK AHK+  +LKEAA +L L+S+  FDK + P KM+S
Sbjct: 407  MLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEAKFDKIVVPEKMVS 461

>sp|P10173|FUMH_PIG Fumarate hydratase, mitochondrial (Fumarase)
          Length = 466

 Score =  303 bits (775), Expect = 6e-82
 Identities = 156/297 (52%), Positives = 202/297 (68%)
 Frame = +2

Query: 2    KKLEFAKVIKIGRTHMQDAVPLTVGQELSSYISQLDYNINRISNSVKIAAKQLAIXXXXX 181
            K  EFA++IKIGRTH QDAVPLT+GQE S Y+ Q+ Y I RI  ++     +LA      
Sbjct: 177  KSREFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAITRIKAAMP-RIYELAAGGTAV 235

Query: 182  XXXXXXXXXFDVEVCQRIKENVKKYLNVEADFGPAQNKFSVLGAHDSLMSVAGDLNTLAT 361
                     F  +V  ++             F  A N F  L AHD+L+  +G +NT A 
Sbjct: 236  GTGLNTRIGFAEKVAAKVAALTG------LPFVTAPNNFEALAAHDALVEHSGAMNTTAC 289

Query: 362  SLMKIANDFRFLGSGPRCGVGEFLLPENEPGSSIMPGKINPTQCESMSMVCAQVMGNYVA 541
            SLMKIAND RFLGSGPR G+GE +LPENEPGSSIMPGK+NPTQCE+++MV AQVMGN+VA
Sbjct: 290  SLMKIANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVA 349

Query: 542  ISIGSSQGNLELNVYKPLIINNLLHSIQLLADCSKCFVKYCVSGLTLNTAQINTYVNQSL 721
            +++G S G+ ELNV+KP++I N+LHS +LL D +  F + CV G+  NT +IN  +N+SL
Sbjct: 350  VTVGGSNGHFELNVFKPMMIKNVLHSARLLGDAAVSFTENCVVGIQANTERINKLMNESL 409

Query: 722  MLVTALNSHIGYDKSAQIAKYAHKNNCSLKEAAVQLKLVSDEDFDKWLDPWKMISPK 892
            MLVTALN HIGYDK+A+IAK AHKN  +LK  AV+L  ++ E FD+W+ P  M+ PK
Sbjct: 410  MLVTALNPHIGYDKAAKIAKTAHKNGSTLKATAVELGYLTAEQFDEWVKPRDMLGPK 466

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,049,764
Number of Sequences: 369166
Number of extensions: 2182553
Number of successful extensions: 5994
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5876
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10144071740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01127

  1. Dr_sW_028_H14
  2. Dr_sW_013_J07
  3. Dr_sW_007_D14
  4. Dr_sW_019_A14