Planarian EST Database

DrC_01102

Cluster detail
GO Category :
Consensus Sequence :
>DrC_01102 CCGGTTGCGGCAAAACGCTCTTGGCTAAAGCTATTGCCAATGAGTGCCAGGCCAATTTTA TCAGCATTAAAGGTCCAGAATTATTGACAATGTGGTTTGGCGAATCAGAAGCAAATGTTC GAGATATATTTGACAAAGCTCGTCAAGCAGCTCCGTGCGTTCTATTCTTCGATGAGTTGG ACTCCATCGCTAAATCAAGAGGAGGCAGTGTTGGTGATGGTGGTGGAGCAGCTGATCGCG TGATCAACCAATTGCTTACCGAAATGGATGGAATGTCTGCGAAAAAAAATGTTTTTATCA TAGGAGCTACGAATCGACCAGATATAATCGATGCTGCAATTCTGCGTCCCGGAAGACTGG ATCAATTGATTTATATTCCGCTACCCGATGAGAAATCCCGTATTCAGATACTTAAGGCAA ATTTGAGAAAATCTCCGATCGCTAAGGATGTTGATGTTAATTACATGGCCAAAGTAACAC ACGGATTCTCCGGTGCAGATTTAACTGAGATTTGCCAACGGGCGTGCAAACAAGCAATTA GAGAGTGTATTGAAGCAGATATCAAGGCTGCTCGTGATCAACAATCTAAAGGAGGAGAGC CGATGGAAGATGACATTGATCCAGTTCCAGAAATCACTCGTAAACATTTTGAGGAAGCAA TGAAATTCGCAAGAAGATCCGTCACTGATAATGATGTGAGAAAATATGAGATGTTCGCTC AAACTCTTCAACAGTCTCGTGGATTTGGTGGTAGTTTTAGATTTCCTGGTGCAAATAACG AAGCATCAAATGACTTTTCTCGTCCAAGTGCTGGAAATCAACAATCAAACATCCCAGTGT CTGCTGGGGGTGCAGGTGCTGGATTCAATGAAGGTGAAGATGATCTCTACAACTGAACGG GAGTCACAACTATTATGTTATCATTTTCATGTTGATTAAATTAGCTAATTGGTTTTTTAT TTGTCATTATTTAATTTTAAAAATTTGTTTTTGTTTATGAAATTTCTATTTTGAGATTTT ATACTGAAATTATTTCAATACGAATTAGTGTTCTATGTTTTGCCTTTACTATTCAATGAA ATTTAAATGGGTCACTTTGTTATCATAGCATGTGTACCACTGGTGGGTTGCATATTGTGA TTATTTACACTGTGGCACTTCACTAAAAATATTCGTTTGTATCATGGTGGGGAATGTTAA AATTAATGAATGATTTACTAACATTTTTTCTTCTATGTACTTTTTATATGGCTTAGTAGG TGTCGTAATTTTCCAGGTCCTGTGATGTAATTATTTGTTATTACGTAAATATTTTCAAAT TTTCCTGAAAATCGGATCATAATATTGGTAGTTGACTCCAAATTATTTTACTGGAATATT TGGGATAATTAAATAAATTTTTCGCAAGGTTTTTCTACATTTCTTTCCGATTGCTTCATG CATGGGATATCTTTTGTGAATTTTTTCAATATCGACTATCACATGTGTCAATAACTTATT TGAAATCATAAATGTGTGATGAGAAAAAAATGACTCATATTTTGTTT

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01102
         (1547 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P46462|TERA_RAT  Transitional endoplasmic reticulum ATPas...   377   e-104
sp|P23787|TERA_XENLA  Transitional endoplasmic reticulum ATP...   377   e-104
sp|P55072|TERA_HUMAN  Transitional endoplasmic reticulum ATP...   375   e-103
sp|Q01853|TERA_MOUSE  Transitional endoplasmic reticulum ATP...   375   e-103
sp|P03974|TERA_PIG  Transitional endoplasmic reticulum ATPas...   375   e-103
sp|P54812|TERA2_CAEEL  Transitional endoplasmic reticulum AT...   374   e-103
sp|P54811|TERA1_CAEEL  Transitional endoplasmic reticulum AT...   371   e-102
sp|Q9LZF6|CD48E_ARATH  Cell division control protein 48 homo...   344   5e-94
sp|Q96372|CDC48_CAPAN  Cell division cycle protein 48 homolog     343   6e-94
sp|Q9SCN8|CD48D_ARATH  Putative cell division control protei...   342   2e-93

>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase (TER ATPase) (15S
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 806

 Score =  377 bits (968), Expect = e-104
 Identities = 198/296 (66%), Positives = 223/296 (75%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQAAPCVLFFDELD
Sbjct: 521  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGMS KKNVFIIGATNRPDIID AILRPGRLD
Sbjct: 581  SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDEKSR+ ILKANLRKSP+AKDVD+ ++AK+T+GFSGADLTEICQRACK AIR
Sbjct: 641  QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE++I+  R++Q+       ++ DPVPEI R HFEEAM+FARRSV+DND+RKYEMFAQ
Sbjct: 701  ESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQ 760

Query: 723  TLXXXXXXXXXXXXPGANNEASNDFSRPSAGNQQSNIPVSXXXXXXXFNEGEDDLY 890
            TL             G  N+     S+ S G    N+            + +DDLY
Sbjct: 761  TLQQSRGFGSFRFPSG--NQGGAGPSQGSGGGTGGNV---------YTEDNDDDLY 805


 Score =  147 bits (371), Expect = 8e-35
 Identities = 77/181 (42%), Positives = 113/181 (62%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DELD
Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 307

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V ++ ATNRP+ ID A+ R GR D
Sbjct: 308 AIAPKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 364

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + + I +PD   R++IL+ + +   +A DVD+  +A  THG  GADL  +C  A  QAIR
Sbjct: 365 REVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIR 424

Query: 543 E 545
           +
Sbjct: 425 K 425

>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase (TER ATPase) (15S
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  377 bits (967), Expect = e-104
 Identities = 200/296 (67%), Positives = 220/296 (74%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQAAPCVLFFDELD
Sbjct: 521  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGMS KKNVFIIGATNRPDIID AILRPGRLD
Sbjct: 581  SIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDEKSR+ ILKANLRKSP+AKDVDV+++AK+T+GFSGADLTEICQRACK AIR
Sbjct: 641  QLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE +I+  RD+Q+       ++ DPVPEI R HFEEAM+ ARRSV+DND+RKYEMFAQ
Sbjct: 701  ESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQ 760

Query: 723  TLXXXXXXXXXXXXPGANNEASNDFSRPSAGNQQSNIPVSXXXXXXXFNEGEDDLY 890
            TL             G  + A      P AG                F E +DDLY
Sbjct: 761  TLQQSRGFGSFRFPAGGQSGAG---PSPGAGGGSGG---------GHFTEEDDDLY 804


 Score =  146 bits (369), Expect = 1e-34
 Identities = 76/181 (41%), Positives = 113/181 (62%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DELD
Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 307

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V ++ ATNRP+ ID A+ R GR D
Sbjct: 308 AIAPKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 364

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + + I +PD   R++IL+ + +   ++ DVD+  +A  THG  GADL  +C  A  QAIR
Sbjct: 365 REVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIR 424

Query: 543 E 545
           +
Sbjct: 425 K 425

>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase (TER ATPase) (15S
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 806

 Score =  375 bits (964), Expect = e-103
 Identities = 188/242 (77%), Positives = 208/242 (85%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQAAPCVLFFDELD
Sbjct: 521  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGMS KKNVFIIGATNRPDIID AILRPGRLD
Sbjct: 581  SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDEKSR+ ILKANLRKSP+AKDVD+ ++AK+T+GFSGADLTEICQRACK AIR
Sbjct: 641  QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE++I+  R++Q+       ++ DPVPEI R HFEEAM+FARRSV+DND+RKYEMFAQ
Sbjct: 701  ESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQ 760

Query: 723  TL 728
            TL
Sbjct: 761  TL 762


 Score =  147 bits (371), Expect = 8e-35
 Identities = 77/181 (42%), Positives = 113/181 (62%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DELD
Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 307

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V ++ ATNRP+ ID A+ R GR D
Sbjct: 308 AIAPKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 364

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + + I +PD   R++IL+ + +   +A DVD+  +A  THG  GADL  +C  A  QAIR
Sbjct: 365 REVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIR 424

Query: 543 E 545
           +
Sbjct: 425 K 425

>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase (TER ATPase) (15S
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 806

 Score =  375 bits (964), Expect = e-103
 Identities = 188/242 (77%), Positives = 208/242 (85%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQAAPCVLFFDELD
Sbjct: 521  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGMS KKNVFIIGATNRPDIID AILRPGRLD
Sbjct: 581  SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDEKSR+ ILKANLRKSP+AKDVD+ ++AK+T+GFSGADLTEICQRACK AIR
Sbjct: 641  QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE++I+  R++Q+       ++ DPVPEI R HFEEAM+FARRSV+DND+RKYEMFAQ
Sbjct: 701  ESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQ 760

Query: 723  TL 728
            TL
Sbjct: 761  TL 762


 Score =  147 bits (371), Expect = 8e-35
 Identities = 77/181 (42%), Positives = 113/181 (62%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DELD
Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 307

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V ++ ATNRP+ ID A+ R GR D
Sbjct: 308 AIAPKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 364

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + + I +PD   R++IL+ + +   +A DVD+  +A  THG  GADL  +C  A  QAIR
Sbjct: 365 REVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIR 424

Query: 543 E 545
           +
Sbjct: 425 K 425

>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase (TER ATPase) (15S
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 806

 Score =  375 bits (964), Expect = e-103
 Identities = 188/242 (77%), Positives = 208/242 (85%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQAAPCVLFFDELD
Sbjct: 521  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELD 580

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGMS KKNVFIIGATNRPDIID AILRPGRLD
Sbjct: 581  SIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLD 640

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDEKSR+ ILKANLRKSP+AKDVD+ ++AK+T+GFSGADLTEICQRACK AIR
Sbjct: 641  QLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR 700

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE++I+  R++Q+       ++ DPVPEI R HFEEAM+FARRSV+DND+RKYEMFAQ
Sbjct: 701  ESIESEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQ 760

Query: 723  TL 728
            TL
Sbjct: 761  TL 762


 Score =  147 bits (371), Expect = 8e-35
 Identities = 77/181 (42%), Positives = 113/181 (62%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DELD
Sbjct: 248 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELD 307

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V ++ ATNRP+ ID A+ R GR D
Sbjct: 308 AIAPKREKTHGEVERRI---VSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFD 364

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + + I +PD   R++IL+ + +   +A DVD+  +A  THG  GADL  +C  A  QAIR
Sbjct: 365 REVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIR 424

Query: 543 E 545
           +
Sbjct: 425 K 425

>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2 (p97/CDC48
            homolog 2)
          Length = 810

 Score =  374 bits (961), Expect = e-103
 Identities = 201/301 (66%), Positives = 224/301 (74%), Gaps = 4/301 (1%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD+FDKAR AAPCVLFFDELD
Sbjct: 526  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELD 585

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIAK                INQ+LTEMDGM+AKKNVFIIGATNRPDIID A+LRPGRLD
Sbjct: 586  SIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLD 645

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDE SR+QI KA+LRK+P++ D+D+N++AK T GFSGADLTEICQRACK AIR
Sbjct: 646  QLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIR 705

Query: 543  ECIEADI---KAARDQQSKGGEPMEDDI-DPVPEITRKHFEEAMKFARRSVTDNDVRKYE 710
            E IE +I   K  +D+ ++G E MED++ DPVPEITR HFEEAMKFARRSVTDND+RKYE
Sbjct: 706  ESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDIRKYE 765

Query: 711  MFAQTLXXXXXXXXXXXXPGANNEASNDFSRPSAGNQQSNIPVSXXXXXXXFNEGEDDLY 890
            MFAQTL            PG    A     +P  GN  S                +DDLY
Sbjct: 766  MFAQTLQQSRGFGNNFKFPGEAPSA----GQPVGGNGGSG------------GNDDDDLY 809

Query: 891  N 893
            N
Sbjct: 810  N 810


 Score =  145 bits (367), Expect = 2e-34
 Identities = 77/184 (41%), Positives = 112/184 (60%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F +  + +P +LF DE+D
Sbjct: 253 GTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEID 312

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + +V +I ATNRP+ ID A+ R GR D
Sbjct: 313 AIAPKREKAHGEVEKRI---VSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFD 369

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + I I +PD   R++IL+ + +   + +DVD+  +A   HGF GADL  +C  A  Q IR
Sbjct: 370 REIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIR 429

Query: 543 ECIE 554
           E +E
Sbjct: 430 EKME 433

>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1 (p97/CDC48
            homolog 1)
          Length = 809

 Score =  371 bits (953), Expect = e-102
 Identities = 202/302 (66%), Positives = 225/302 (74%), Gaps = 5/302 (1%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD+FDKAR AAPCVLFFDELD
Sbjct: 527  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELD 586

Query: 183  SIAKXXXXXXXXXXXXXXXX-INQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRL 359
            SIAK                 INQ+LTEMDGM+AKKNVFIIGATNRPDIID A+LRPGRL
Sbjct: 587  SIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRL 646

Query: 360  DQLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAI 539
            DQLIYIPLPDE SR QILKA+LRK+P++KD+D+ ++AK T GFSGADLTEICQRACK AI
Sbjct: 647  DQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAI 706

Query: 540  RECIEADI---KAARDQQSKGGEPMEDD-IDPVPEITRKHFEEAMKFARRSVTDNDVRKY 707
            RE IE +I   K  +D+Q++G E MEDD +DPVPEITR HFEEAMKFARRSVTDND+RKY
Sbjct: 707  RESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDIRKY 766

Query: 708  EMFAQTLXXXXXXXXXXXXPGANNEASNDFSRPSAGNQQSNIPVSXXXXXXXFNEGEDDL 887
            EMFAQTL            PG              G+   + PV          + +DDL
Sbjct: 767  EMFAQTLQQSRGFGNNFKFPGEQR-----------GSDAPSAPVPA--------QDDDDL 807

Query: 888  YN 893
            YN
Sbjct: 808  YN 809


 Score =  147 bits (370), Expect = 1e-34
 Identities = 77/184 (41%), Positives = 112/184 (60%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  + F  I GPE+++   GESE+N+R  F++  +  P +LF DE+D
Sbjct: 254 GTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEID 313

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           +IA                 ++QLLT MDG+  + N+ +I ATNRP+ ID A+ R GR D
Sbjct: 314 AIAPKREKTNGEVERRI---VSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFD 370

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + I I +PD   R++IL+ + +   +A DVD+  +A   HGF GADL  +C  A  Q IR
Sbjct: 371 REIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIR 430

Query: 543 ECIE 554
           E +E
Sbjct: 431 EKME 434

>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E (AtCDC48e) (Transitional
            endoplasmic reticulum ATPase E)
          Length = 810

 Score =  344 bits (882), Expect = 5e-94
 Identities = 178/244 (72%), Positives = 200/244 (81%), Gaps = 2/244 (0%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR+IFDKARQ+APCVLFFDELD
Sbjct: 524  GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 583

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIA                 +NQLLTEMDGM+AKK VFIIGATNRPDIID+A+LRPGRLD
Sbjct: 584  SIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLD 643

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDE SR+ I KA LRKSP+AKDVDV  +AK T GFSGAD+TEICQRACK AIR
Sbjct: 644  QLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIR 703

Query: 543  ECIEADIKAARDQQSKGGEPMEDDI--DPVPEITRKHFEEAMKFARRSVTDNDVRKYEMF 716
            E IE DI+  R ++S+  E ME+D+  D V EI   HFEE+MK+ARRSV+D D+RKY+ F
Sbjct: 704  ENIEKDIENER-RRSQNPEAMEEDMVDDEVSEIRAAHFEESMKYARRSVSDADIRKYQAF 762

Query: 717  AQTL 728
            AQTL
Sbjct: 763  AQTL 766


 Score =  154 bits (389), Expect = 7e-37
 Identities = 79/181 (43%), Positives = 118/181 (65%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DE+D
Sbjct: 251 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 310

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           SIA                 ++QLLT MDG+ ++ +V ++GATNRP+ ID A+ R GR D
Sbjct: 311 SIAPKREKTNGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 367

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + I I +PDE  R+++L+ + +   +A+DVD+  ++K THG+ GADL  +C  A  Q IR
Sbjct: 368 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR 427

Query: 543 E 545
           E
Sbjct: 428 E 428

>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog
          Length = 805

 Score =  343 bits (881), Expect = 6e-94
 Identities = 174/242 (71%), Positives = 199/242 (82%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVR+IFDKARQ+APCVLFFDELD
Sbjct: 525  GCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIA                 +NQLLTEMDGM+AKK VFIIGATNRPDIID A+LRPGRLD
Sbjct: 585  SIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLD 644

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDE SR QI KA LRKSP++KD+D+  +AK T GFSGAD+TEICQRACK AIR
Sbjct: 645  QLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRACKYAIR 704

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE DI+  + +Q +  + M++D+D VPEI   HFEE+MK+ARRSV+D D+RKY+ FAQ
Sbjct: 705  ENIEKDIEREKRRQ-ENPDSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQ 763

Query: 723  TL 728
            TL
Sbjct: 764  TL 765


 Score =  154 bits (388), Expect = 9e-37
 Identities = 84/220 (38%), Positives = 134/220 (60%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DE+D
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           SIA                 ++QLLT MDG+ ++ +V ++GATNRP+ ID A+ R GR D
Sbjct: 312 SIAPKREKTHGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 368

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + I I +PDE  R+++L  + +   +A++VD+  ++K THG+ GADL  +C  A  Q IR
Sbjct: 369 REIDIGVPDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIR 428

Query: 543 ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAM 662
           E  + D+    D      + ++ ++     +T +HF+ A+
Sbjct: 429 E--KMDVLDLED------DTIDAEVLNSMAVTNEHFQTAL 460

>sp|Q9SCN8|CD48D_ARATH Putative cell division control protein 48 homolog D (AtCDC48d)
            (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  342 bits (877), Expect = 2e-93
 Identities = 174/242 (71%), Positives = 199/242 (82%)
 Frame = +3

Query: 3    GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
            GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR+IFDKARQ+APCVLFFDELD
Sbjct: 525  GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584

Query: 183  SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
            SIA                 +NQLLTEMDGM+AKK VFIIGATNRPDIID A+LRPGRLD
Sbjct: 585  SIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLD 644

Query: 363  QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
            QLIYIPLPDE+SR QI K+ LRKSP+AKDVD+  +AK T GFSGAD+TEICQR+CK AIR
Sbjct: 645  QLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIR 704

Query: 543  ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAMKFARRSVTDNDVRKYEMFAQ 722
            E IE DI+  R ++++  E ME+D + + EI   HFEE+MK+ARRSV+D D+RKY+ FAQ
Sbjct: 705  ENIEKDIEKER-KRAESPEAMEEDEEEIAEIKAGHFEESMKYARRSVSDADIRKYQAFAQ 763

Query: 723  TL 728
            TL
Sbjct: 764  TL 765


 Score =  154 bits (390), Expect = 5e-37
 Identities = 86/220 (39%), Positives = 134/220 (60%)
 Frame = +3

Query: 3   GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARQAAPCVLFFDELD 182
           G GKTL+A+A+ANE  A F  I GPE+++   GESE+N+R  F++A + AP ++F DE+D
Sbjct: 252 GSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEID 311

Query: 183 SIAKXXXXXXXXXXXXXXXXINQLLTEMDGMSAKKNVFIIGATNRPDIIDAAILRPGRLD 362
           SIA                 ++QLLT MDG+ ++ +V ++GATNRP+ ID A+ R GR D
Sbjct: 312 SIAPKREKTHGEVERRI---VSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFD 368

Query: 363 QLIYIPLPDEKSRIQILKANLRKSPIAKDVDVNYMAKVTHGFSGADLTEICQRACKQAIR 542
           + I I +PDE  R+++L+ + +   +A+DVD+  ++K THG+ GADL  +C  A  Q IR
Sbjct: 369 REIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIR 428

Query: 543 ECIEADIKAARDQQSKGGEPMEDDIDPVPEITRKHFEEAM 662
           E  + D+    D      E ++ +I     ++  HF+ A+
Sbjct: 429 E--KMDVIDLDD------EEIDAEILNSMAVSNDHFQTAL 460

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,800,247
Number of Sequences: 369166
Number of extensions: 3204742
Number of successful extensions: 8158
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7819
length of database: 68,354,980
effective HSP length: 115
effective length of database: 47,110,455
effective search space used: 18844182000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01102

Planaria EST Database

DrC_01102

BLASTX 2.2.13 [Nov-27-2005]

Cluster detail