DrC_01093
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01093 (1308 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q8BXK8|CENG2_MOUSE Centaurin-gamma 2 (ARF-GAP with GTP-b... 37 0.096 sp|Q9UPQ3|CENG2_HUMAN Centaurin-gamma 2 (ARF-GAP with GTP-b... 37 0.096 sp|P24639|ANXA7_DICDI Annexin A7 (Annexin VII) (Synexin) 37 0.16 sp|Q96P47|CENG3_HUMAN Centaurin-gamma 3 37 0.16 sp|Q92734|TFG_HUMAN Protein TFG (TRK-fused gene protein) 34 1.1 sp|Q15532|SSXT_HUMAN SSXT protein (Synovial sarcoma, transl... 33 2.4 sp|Q10172|YDC9_SCHPO Hypothetical protein C25G10.09c in chr... 32 5.3 sp|Q9JHK5|PLEK_MOUSE Pleckstrin 31 6.9 sp|P08567|PLEK_HUMAN Pleckstrin (Platelet p47 protein) 31 6.9 sp|P04723|GDA3_WHEAT Alpha/beta-gliadin A-III precursor (Pr... 31 6.9
>sp|Q8BXK8|CENG2_MOUSE Centaurin-gamma 2 (ARF-GAP with GTP-binding protein-like, ankyrin repeat and pleckstrin homology domains 1) (AGAP1) Length = 857 Score = 37.4 bits (85), Expect = 0.096 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 22 IKTGNLLKYSGSAFNSKWKNNYVEFCKNSTFRWYEKQGD 138 IK G LLK SG + N +WK YV C N ++ D Sbjct: 348 IKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHD 386
>sp|Q9UPQ3|CENG2_HUMAN Centaurin-gamma 2 (ARF-GAP with GTP-binding protein-like, ankyrin repeat and pleckstrin homology domains 1) (AGAP1) Length = 857 Score = 37.4 bits (85), Expect = 0.096 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 22 IKTGNLLKYSGSAFNSKWKNNYVEFCKNSTFRWYEKQGD 138 IK G LLK SG + N +WK YV C N ++ D Sbjct: 348 IKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHD 386
>sp|P24639|ANXA7_DICDI Annexin A7 (Annexin VII) (Synexin) Length = 462 Score = 36.6 bits (83), Expect = 0.16 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Frame = +1 Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPY----VAGTNYGQPVSYAAG 876 GYP + Y PQ Y Q G YP QQGY P P G G PV +A G Sbjct: 87 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGVPVGFAPG 145
Score = 36.2 bits (82), Expect = 0.21
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQT 891
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 63 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQG 122
Query: 892 Y 894
Y
Sbjct: 123 Y 123
Score = 35.0 bits (79), Expect = 0.48
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +1
Query: 706 ATYSGYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQ 879
A GYP + Y PQ Y Q G YP QQGY P P G Q G
Sbjct: 23 APQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGY 82
Query: 880 PSQ 888
P Q
Sbjct: 83 PPQ 85
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 33 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQ 91
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 39 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQ 97
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 45 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQ 103
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 51 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQ 109
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/59 (37%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = +1
Query: 718 GYPQNRPYAPQTPY--QAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888
GYP + Y PQ Y Q G YP QQGY P P G Q G P Q
Sbjct: 57 GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQ 115
>sp|Q96P47|CENG3_HUMAN Centaurin-gamma 3 Length = 876 Score = 36.6 bits (83), Expect = 0.16 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 22 IKTGNLLKYSGSAFNSKWKNNYVEFCKNSTFRWYEKQGD 138 IK G LLK SG + N +WK YV C N ++ D Sbjct: 370 IKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHD 408
>sp|Q92734|TFG_HUMAN Protein TFG (TRK-fused gene protein) Length = 400 Score = 33.9 bits (76), Expect = 1.1 Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 712 YSGYPQNRPYAPQTPYQAGQVQATNYPRQQGYTPGVSQPYVAGTNYG-QPVSYAAGQPSQ 888 +SG PQ P P Y QA+NYP Q YT SQP TNY P S PSQ Sbjct: 304 FSGQPQQLPAQPPQQY-----QASNYPAQT-YTAQTSQP----TNYTVAPASQPGMAPSQ 353
>sp|Q15532|SSXT_HUMAN SSXT protein (Synovial sarcoma, translocated to X chromosome) (SYT protein) Length = 418 Score = 32.7 bits (73), Expect = 2.4 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Frame = +1 Query: 712 YSGYPQNRPYAPQTPYQAGQVQATNYP-RQQGYTPGVSQPYVAGTNY--GQPVSYAAGQP 882 Y G P + Y PQ GQ YP +QQGY P P NY GQ Y +P Sbjct: 336 YQGPPPQQGYPPQQQQYPGQ---QGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRP 392 Query: 883 SQ 888 +Q Sbjct: 393 TQ 394
>sp|Q10172|YDC9_SCHPO Hypothetical protein C25G10.09c in chromosome I Length = 1794 Score = 31.6 bits (70), Expect = 5.3 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Frame = +1 Query: 727 QNRPYAPQTPYQAGQ-----VQATNYPRQQGYTPGVSQPYVAGTNYGQPVSY-AAGQPS 885 ++ PYAPQ P Q Q ATN Q ++P + N G P++ AAGQPS Sbjct: 1557 RSSPYAPQEPVQKPQAINNIAPATNLGTSQSFSPRMGPV----NNSGSPLAMNAAGQPS 1611
>sp|Q9JHK5|PLEK_MOUSE Pleckstrin Length = 350 Score = 31.2 bits (69), Expect = 6.9 Identities = 20/49 (40%), Positives = 30/49 (61%) Frame = +1 Query: 22 IKTGNLLKYSGSAFNSKWKNNYVEFCKNSTFRWYEKQGDSSPKRSIVLK 168 I+ G L+K GS FN+ WK +V ++ +Y+K+ D+SPK I LK Sbjct: 6 IREGYLVK-KGSVFNT-WKPMWVVLLEDG-IEFYKKKSDNSPKGMIPLK 51
>sp|P08567|PLEK_HUMAN Pleckstrin (Platelet p47 protein) Length = 350 Score = 31.2 bits (69), Expect = 6.9 Identities = 20/49 (40%), Positives = 30/49 (61%) Frame = +1 Query: 22 IKTGNLLKYSGSAFNSKWKNNYVEFCKNSTFRWYEKQGDSSPKRSIVLK 168 I+ G L+K GS FN+ WK +V ++ +Y+K+ D+SPK I LK Sbjct: 6 IREGYLVK-KGSVFNT-WKPMWVVLLEDG-IEFYKKKSDNSPKGMIPLK 51
>sp|P04723|GDA3_WHEAT Alpha/beta-gliadin A-III precursor (Prolamin) Length = 282 Score = 31.2 bits (69), Expect = 6.9 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = +1 Query: 721 YPQNRPYAPQTPYQAGQVQATNYPRQQGYTPGVSQPYVAGTNYGQPVSYAAGQPSQ 888 YPQ +P+ PQ PY Q +P QQ Y QP QP+S Q Q Sbjct: 76 YPQPQPFPPQLPYP----QTQPFPPQQPY----PQPQPQYPQPQQPISQQQAQQQQ 123
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,688,408
Number of Sequences: 369166
Number of extensions: 2079035
Number of successful extensions: 5912
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5858
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15181755990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
