Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_G24
(568 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48614|WN10B_MOUSE Wnt-10b protein precursor (Wnt-12) 30 3.2
sp|O00744|WN1B_HUMAN Wnt-10b protein precursor (Wnt-12) 30 3.2
sp|Q9WTI7|MYO1C_MOUSE Myosin Ic (Myosin I beta) (MMIb) 30 3.2
sp|P49339|WNT11_CHICK Wnt-11 protein precursor 30 4.2
sp|O00159|MYO1C_HUMAN Myosin Ic (Myosin I beta) (MMI-beta) ... 30 4.2
sp|Q9Y7Z8|MYO1_SCHPO Myosin-1 30 4.2
sp|P51891|WNT11_COTJA Wnt-11 protein precursor 30 4.2
sp|Q06442|WNT5A_AMBME Wnt-5a protein precursor 30 5.5
sp|P41221|WNT5A_HUMAN Wnt-5a protein precursor 30 5.5
sp|Q9QXQ7|WNT5A_RAT Wnt-5a protein precursor 30 5.5
>sp|P48614|WN10B_MOUSE Wnt-10b protein precursor (Wnt-12)
Length = 389
Score = 30.4 bits (67), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY LC +
Sbjct: 362 ERCHCRFHWCCYVLCDE 378
>sp|O00744|WN1B_HUMAN Wnt-10b protein precursor (Wnt-12)
Length = 389
Score = 30.4 bits (67), Expect = 3.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY LC +
Sbjct: 362 ERCHCRFHWCCYVLCDE 378
>sp|Q9WTI7|MYO1C_MOUSE Myosin Ic (Myosin I beta) (MMIb)
Length = 1028
Score = 30.4 bits (67), Expect = 3.2
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 268 SWLGSWMGRSWVGRSWVGRPWMGTSWLGMAP*WKLE*FEFW*LE*LKSIHFHNEQLQQIF 447
+WL + RS + W T+ LG+ + E F+ E I++ NE+LQQ+F
Sbjct: 356 TWLVRKINRSLASKDAESPSWRSTTVLGLLDIYGFEVFQHNSFEQF-CINYCNEKLQQLF 414
Query: 448 INFVLR 465
I L+
Sbjct: 415 IELTLK 420
>sp|P49339|WNT11_CHICK Wnt-11 protein precursor
Length = 354
Score = 30.0 bits (66), Expect = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY C K
Sbjct: 327 ERCHCKYHWCCYVTCKK 343
>sp|O00159|MYO1C_HUMAN Myosin Ic (Myosin I beta) (MMI-beta) (MMIb)
Length = 1028
Score = 30.0 bits (66), Expect = 4.2
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 268 SWLGSWMGRSWVGRSWVGRPWMGTSWLGMAP*WKLE*FEFW*LE*LKSIHFHNEQLQQIF 447
+WL + RS + W T+ LG+ + E F+ E I++ NE+LQQ+F
Sbjct: 356 TWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQF-CINYCNEKLQQLF 414
Query: 448 INFVLR 465
I L+
Sbjct: 415 IELPLK 420
>sp|Q9Y7Z8|MYO1_SCHPO Myosin-1
Length = 1217
Score = 30.0 bits (66), Expect = 4.2
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 412 IHFHNEQLQQIFINFVLRFIDEILHVVINEQMSYVSLL*FNHDAIANIFD 561
I++ NE+LQQIFI L+ E + EQ+++ + FN+ + ++ +
Sbjct: 431 INYVNEKLQQIFIELTLKTEQE---EYVREQIAWTPIKYFNNKVVCDLIE 477
>sp|P51891|WNT11_COTJA Wnt-11 protein precursor
Length = 354
Score = 30.0 bits (66), Expect = 4.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY C K
Sbjct: 327 ERCHCKYHWCCYVTCKK 343
>sp|Q06442|WNT5A_AMBME Wnt-5a protein precursor
Length = 359
Score = 29.6 bits (65), Expect = 5.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY C K
Sbjct: 332 ERCHCKFHWCCYVKCKK 348
>sp|P41221|WNT5A_HUMAN Wnt-5a protein precursor
Length = 365
Score = 29.6 bits (65), Expect = 5.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY C K
Sbjct: 338 ERCHCKFHWCCYVKCKK 354
>sp|Q9QXQ7|WNT5A_RAT Wnt-5a protein precursor
Length = 379
Score = 29.6 bits (65), Expect = 5.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 199 KRCHWNCRWCCYSLCSK 249
+RCH WCCY C K
Sbjct: 352 ERCHCKFHWCCYVKCKK 368
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,347,558
Number of Sequences: 369166
Number of extensions: 853196
Number of successful extensions: 2567
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2540
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4127973360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)