Planaria EST Database

DrC_00991

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00991
         (1394 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8K021|SCAM1_MOUSE  Secretory carrier-associated membrane...   133   1e-30
sp|P56603|SCAM1_RAT  Secretory carrier-associated membrane p...   133   1e-30
sp|O15126|SCAM1_HUMAN  Secretory carrier-associated membrane...   132   2e-30
sp|O77735|SCAM1_PIG  Secretory carrier-associated membrane p...   129   2e-29
sp|Q58DR5|SCAM3_BOVIN  Secretory carrier-associated membrane...   120   9e-27
sp|O15127|SCAM2_HUMAN  Secretory carrier-associated membrane...   119   2e-26
sp|Q9JKD3|SCAM5_MOUSE  Secretory carrier-associated membrane...   119   2e-26
sp|Q9JKE3|SCAM5_RAT  Secretory carrier-associated membrane p...   119   2e-26
sp|Q8TAC9|SCAM5_HUMAN  Secretory carrier-associated membrane...   117   8e-26
sp|Q9ERN0|SCAM2_MOUSE  Secretory carrier-associated membrane...   117   8e-26

>sp|Q8K021|SCAM1_MOUSE Secretory carrier-associated membrane protein 1 (Secretory carrier
           membrane protein 1)
          Length = 338

 Score =  133 bits (335), Expect = 1e-30
 Identities = 90/310 (29%), Positives = 133/310 (42%), Gaps = 16/310 (5%)
 Frame = +2

Query: 29  NNSDLNPFAATPTRNDPPPYRPTVQTETLNDFNPFENE----PAVIQAHNTES------K 178
           NN   +P     TRN PP          L+++NPF +     P  ++  N  +      K
Sbjct: 15  NNPFKDPSVTQVTRNVPPG---------LDEYNPFSDSRTPPPGSVKMPNVPNTQPAIMK 65

Query: 179 KNEVNNSFQTITN------AXXXXXXXXXXXXANELSXXXXXXXXXXXXXXGSIKNFPPL 340
             E + ++  IT       A            A EL               G   N+PPL
Sbjct: 66  PTEEHPAYTQITKEHALAQAELLKRQEELERKAAELDRREREMQNLSQH--GRKNNWPPL 123

Query: 341 PSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMITQDVXXXX 520
           PS FP+ PCFYQ+  V+IP E+++ V+  +Y+WM ++V + +NI G L++     V    
Sbjct: 124 PSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAWFC---VDSSR 180

Query: 521 XXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXX 700
                          P S++CW+R LY A                               
Sbjct: 181 AVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHVLQAAGFH 240

Query: 701 XXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTGASFEKAK 880
              +CGWI+SL  L  N+ VG  M IIA  +T   +   ++  KVH +YR+TGASFEKA+
Sbjct: 241 NWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFEKAQ 300

Query: 881 AEFSRDLVSN 910
            EF+  ++SN
Sbjct: 301 QEFATGVMSN 310

>sp|P56603|SCAM1_RAT Secretory carrier-associated membrane protein 1 (Secretory carrier
           membrane protein 1) (SCAMP 37)
          Length = 338

 Score =  133 bits (334), Expect = 1e-30
 Identities = 90/310 (29%), Positives = 130/310 (41%), Gaps = 16/310 (5%)
 Frame = +2

Query: 29  NNSDLNPFAATPTRNDPPPYRPTVQTETLNDFNPFENE----------PAVIQAHNTESK 178
           NN   +P     TRN PP          L+++NPF +           P V        K
Sbjct: 15  NNPFKDPSVTQVTRNVPPG---------LDEYNPFSDSRTPPPGGVKMPNVPNTQPAIMK 65

Query: 179 KNEVNNSFQTITN------AXXXXXXXXXXXXANELSXXXXXXXXXXXXXXGSIKNFPPL 340
             E + ++  IT       A            A EL               G   N+PPL
Sbjct: 66  PTEEHPAYTQITKEHALAQAELLKRQEELERKAAELDRREREMQNLSQH--GRKNNWPPL 123

Query: 341 PSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMITQDVXXXX 520
           PS FP+ PCFYQ+  V+IP E+++ V+  +Y+WM ++V + +NI G L++     V    
Sbjct: 124 PSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAWFC---VDSSR 180

Query: 521 XXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXX 700
                          P S++CW+R LY A                               
Sbjct: 181 AVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAVHVLQAAGFH 240

Query: 701 XXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTGASFEKAK 880
              +CGWI+SL  L  N+ VG  M IIA  +T   +   ++  KVH +YR+TGASFEKA+
Sbjct: 241 NWGNCGWISSLTGLNKNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRTTGASFEKAQ 300

Query: 881 AEFSRDLVSN 910
            EF+  ++SN
Sbjct: 301 QEFATGVMSN 310

>sp|O15126|SCAM1_HUMAN Secretory carrier-associated membrane protein 1 (Secretory carrier
           membrane protein 1)
          Length = 338

 Score =  132 bits (333), Expect = 2e-30
 Identities = 68/199 (34%), Positives = 100/199 (50%)
 Frame = +2

Query: 314 GSIKNFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYM 493
           G   N+PPLPS FP+ PCFYQ+  V+IP E+++ V+  +Y+WM ++V + +NI G L++ 
Sbjct: 115 GRKNNWPPLPSNFPVGPCFYQDFSVDIPVEFQKTVKLMYYLWMFHAVTLFLNIFGCLAWF 174

Query: 494 ITQDVXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXX 673
               V                   P S++CW+R LY A                      
Sbjct: 175 C---VDSARAVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAV 231

Query: 674 XXXXXXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRS 853
                       +CGWI+SL  L  N+ VG  M IIA  +T   +   ++  KVH +YR+
Sbjct: 232 HVLQAAGFHNWGNCGWISSLTGLNQNIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRT 291

Query: 854 TGASFEKAKAEFSRDLVSN 910
           TGASFEKA+ EF+  ++SN
Sbjct: 292 TGASFEKAQQEFATGVMSN 310

>sp|O77735|SCAM1_PIG Secretory carrier-associated membrane protein 1 (Secretory carrier
           membrane protein 1)
          Length = 338

 Score =  129 bits (324), Expect = 2e-29
 Identities = 66/199 (33%), Positives = 99/199 (49%)
 Frame = +2

Query: 314 GSIKNFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYM 493
           G   N+PPLP  FP+ PCFYQ+  V+IP E+++ V+  +Y+WM ++V + +NI G L++ 
Sbjct: 115 GRKNNWPPLPGNFPVGPCFYQDFSVDIPVEFQKTVKIMYYLWMFHAVTLFLNIFGCLAWF 174

Query: 494 ITQDVXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXX 673
               V                   P S++CW+R LY A                      
Sbjct: 175 C---VDPSRGVDFGLSILWFLLFTPCSFVCWYRPLYGAFRSDSSFRFFVFFFVYICQFAV 231

Query: 674 XXXXXXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRS 853
                       +CGWI+SL  L  ++ VG  M IIA  +T   +   ++  KVH +YR+
Sbjct: 232 HVLQAAGFHNWGNCGWISSLTGLNQSIPVGIMMIIIAALFTASAVISLVMFKKVHGLYRT 291

Query: 854 TGASFEKAKAEFSRDLVSN 910
           TGASFEKA+ EF+  ++SN
Sbjct: 292 TGASFEKAQQEFATGVMSN 310

>sp|Q58DR5|SCAM3_BOVIN Secretory carrier-associated membrane protein 3 (Secretory carrier
           membrane protein 3)
          Length = 347

 Score =  120 bits (301), Expect = 9e-27
 Identities = 59/195 (30%), Positives = 98/195 (50%)
 Frame = +2

Query: 326 NFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMITQD 505
           N+PPLPS+ P++PCF+Q+I +EIP E+++ V T +Y+WM  ++ +L+N +  L+      
Sbjct: 134 NWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFC--- 190

Query: 506 VXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXXXX 685
           V                   P S++CW+R +YKA                          
Sbjct: 191 VETSNGSGFGLSILWILLFTPCSFVCWYRPMYKAFRSDSSSNFFVFFFIFFVQDVLFVLQ 250

Query: 686 XXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTGAS 865
                     GWI++L  LK N  V   M ++A  +T + + G +++ ++H +YR TGAS
Sbjct: 251 AIGIPGWGFSGWISALVVLKVNTAVAVLMLLVALFFTGIAVLGIVMLKRIHSLYRRTGAS 310

Query: 866 FEKAKAEFSRDLVSN 910
           F+KA+ EF+  + SN
Sbjct: 311 FQKAQQEFAAGVFSN 325

>sp|O15127|SCAM2_HUMAN Secretory carrier-associated membrane protein 2 (Secretory carrier
           membrane protein 2)
          Length = 329

 Score =  119 bits (298), Expect = 2e-26
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
 Frame = +2

Query: 326 NFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMITQD 505
           N+PPLPSW P+KPCFYQ+   EIPA+Y++I +  +Y+WM +SV + +N++  L++     
Sbjct: 119 NWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAWFSGNS 178

Query: 506 VXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXXXX 685
                               P +++CW+R +YKA                          
Sbjct: 179 ---SKGVDFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYIIQ 235

Query: 686 XXXXXXXXSCGWINSLAELKT-NVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTGA 862
                     GWI +L+ L   ++ +   M ++AG +T+  +    L+ +VH +YR TGA
Sbjct: 236 LVGIPGLGDSGWIAALSTLDNHSLAISVIMMVVAGFFTLCAVLSVFLLQRVHSLYRRTGA 295

Query: 863 SFEKAKAEFSRDLVSN 910
           SF++A+ EFS+ + S+
Sbjct: 296 SFQQAQEEFSQGIFSS 311

>sp|Q9JKD3|SCAM5_MOUSE Secretory carrier-associated membrane protein 5 (Secretory carrier
           membrane protein 5)
          Length = 235

 Score =  119 bits (298), Expect = 2e-26
 Identities = 59/191 (30%), Positives = 91/191 (47%)
 Frame = +2

Query: 320 IKNFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMIT 499
           + NFPPLP + P+KPCFYQ+ + +IP ++  + +  +Y+WM  SV + VN++G L+++I 
Sbjct: 5   VNNFPPLPKFIPLKPCFYQDFEADIPPQHLSLTKRLYYLWMLNSVTLAVNLVGCLAWLI- 63

Query: 500 QDVXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXX 679
                                 P SY+CWFR +YKA                 A      
Sbjct: 64  ---GGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120

Query: 680 XXXXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTG 859
                      CGWI +++   TN+G    M I    +TVV +   I +  VH+ YR +G
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVVAVFSFIALSMVHKFYRGSG 180

Query: 860 ASFEKAKAEFS 892
            SF KA+ E++
Sbjct: 181 GSFSKAQEEWT 191

>sp|Q9JKE3|SCAM5_RAT Secretory carrier-associated membrane protein 5 (Secretory carrier
           membrane protein 5)
          Length = 235

 Score =  119 bits (298), Expect = 2e-26
 Identities = 59/191 (30%), Positives = 91/191 (47%)
 Frame = +2

Query: 320 IKNFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMIT 499
           + NFPPLP + P+KPCFYQ+ + +IP ++  + +  +Y+WM  SV + VN++G L+++I 
Sbjct: 5   VNNFPPLPKFIPLKPCFYQDFEADIPPQHLSLTKRLYYLWMLNSVTLAVNLVGCLAWLI- 63

Query: 500 QDVXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXX 679
                                 P SY+CWFR +YKA                 A      
Sbjct: 64  ---GGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120

Query: 680 XXXXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTG 859
                      CGWI +++   TN+G    M I    +TVV +   I +  VH+ YR +G
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVVAVFSFIALSMVHKFYRGSG 180

Query: 860 ASFEKAKAEFS 892
            SF KA+ E++
Sbjct: 181 GSFSKAQEEWT 191

>sp|Q8TAC9|SCAM5_HUMAN Secretory carrier-associated membrane protein 5 (Secretory carrier
           membrane protein 5)
          Length = 235

 Score =  117 bits (293), Expect = 8e-26
 Identities = 58/191 (30%), Positives = 91/191 (47%)
 Frame = +2

Query: 320 IKNFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMIT 499
           + NFPPLP + P+KPCFYQ+ + +IP ++  + +  +Y+WM  SV + VN++G L+++I 
Sbjct: 5   VNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAWLI- 63

Query: 500 QDVXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXX 679
                                 P SY+CWFR +YKA                 A      
Sbjct: 64  ---GGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISI 120

Query: 680 XXXXXXXXXXSCGWINSLAELKTNVGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTG 859
                      CGWI +++   TN+G    M I    +TV+ +   I +  VH+ YR +G
Sbjct: 121 IQAVGIPGWGVCGWIATISFFGTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSG 180

Query: 860 ASFEKAKAEFS 892
            SF KA+ E++
Sbjct: 181 GSFSKAQEEWT 191

>sp|Q9ERN0|SCAM2_MOUSE Secretory carrier-associated membrane protein 2 (Secretory carrier
           membrane protein 2)
          Length = 329

 Score =  117 bits (293), Expect = 8e-26
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
 Frame = +2

Query: 326 NFPPLPSWFPMKPCFYQEIDVEIPAEYRQIVRTGFYIWMAYSVVMLVNIIGTLSYMITQD 505
           N+PPLPSW P+KPCFYQ+   EIPA+Y++I +  +Y+WM +SV + +N++  L++  T D
Sbjct: 119 NWPPLPSWCPVKPCFYQDFSTEIPADYQRICKMLYYLWMLHSVTLFLNLLACLAW-FTSD 177

Query: 506 VXXXXXXXXXXXXXXXXXXVPASYICWFRSLYKAXXXXXXXXXXXXXXXXXAXXXXXXXX 685
                               P +++CW+R +YKA                          
Sbjct: 178 A--ANGTAFGLSILWFLIFTPCAFLCWYRPIYKAFRSDNSFSFFVFFFVFFCQIGIYFIQ 235

Query: 686 XXXXXXXXSCGWINSLAELKTN-VGVGAFMCIIAGCYTVVLITGSILIFKVHRIYRSTGA 862
                   + GW+ +L+ +K   + V   M ++AG +T+       L+ +VH  YR TGA
Sbjct: 236 LIGLPNLGTSGWLAALSTMKNGPLAVTIIMMVVAGFFTLCAGLSLFLLQRVHAFYRRTGA 295

Query: 863 SFEKAKAEFSRDLVSN 910
           SF++A+ EFS+ + S+
Sbjct: 296 SFQQAQEEFSQGIFSS 311

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,958,118
Number of Sequences: 369166
Number of extensions: 2486921
Number of successful extensions: 5949
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5919
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 16553316500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00991

  1. Dr_sW_025_A01
  2. Dr_sW_004_G02
  3. Dr_sW_028_O07
  4. Dr_sW_003_B18