Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00916 (537 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P00443|SODC_HORSE Superoxide dismutase [Cu-Zn] 213 3e-55 sp|O73872|SODC_BRARE Superoxide dismutase [Cu-Zn] 213 3e-55 sp|P08228|SODC_MOUSE Superoxide dismutase [Cu-Zn] 209 5e-54 sp|Q8HXQ0|SODC_MACMU Superoxide dismutase [Cu-Zn] >gi|38503... 207 1e-53 sp|Q8HXP8|SODC_CALJA Superoxide dismutase [Cu-Zn] 205 5e-53 sp|Q8HXQ3|SODC_HYLLA Superoxide dismutase [Cu-Zn] 204 8e-53 sp|O65199|SODCP_VITVI Superoxide dismutase [Cu-Zn], chlorop... 204 8e-53 sp|P07632|SODC_RAT Superoxide dismutase [Cu-Zn] 202 3e-52 sp|P41973|SODC_DROWI Superoxide dismutase [Cu-Zn] 202 4e-52 sp|P00441|SODC_HUMAN Superoxide dismutase [Cu-Zn] >gi|38503... 201 9e-52
>sp|P00443|SODC_HORSE Superoxide dismutase [Cu-Zn] Length = 154 Score = 213 bits (541), Expect = 3e-55 Identities = 99/152 (65%), Positives = 117/152 (76%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + ++G I F Q GGPV L+ I GLT G+HGFH+HEFGDNT GC + Sbjct: 1 MALKAVCVLKGDGPVHGVIHFEQQQEGGPVVLKGFIEGLTKGDHGFHVHEFGDNTQGCTT 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AGAH+NP K HG P DEERHVGDLGNVTAD NGK V + D+VISL G +SIIGR++V+ Sbjct: 61 AGAHFNPLSKKHGGPKDEERHVGDLGNVTADENGKADVDMKDSVISLSGKHSIIGRTMVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGI 474 HE +DDLGKGG+E S TGNAG RLACGV+GI Sbjct: 121 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
>sp|O73872|SODC_BRARE Superoxide dismutase [Cu-Zn] Length = 154 Score = 213 bits (541), Expect = 3e-55 Identities = 97/154 (62%), Positives = 119/154 (77%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M AVCVLK + GT+ F+Q PV++ EI+GLTPG HGFH+H FGDNTNGCIS Sbjct: 1 MVNKAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCIS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NPH KTHG P D RHVGDLGNVTAD++G +++ D +++L G +SIIGR++VI Sbjct: 61 AGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVI 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE EDDLGKGG+E S TGNAGGRLACGV+GIT+ Sbjct: 121 HEKEDDLGKGGNEESLKTGNAGGRLACGVIGITQ 154
>sp|P08228|SODC_MOUSE Superoxide dismutase [Cu-Zn] Length = 154 Score = 209 bits (531), Expect = 5e-54 Identities = 96/154 (62%), Positives = 116/154 (75%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + + GTI F Q SG PV L +I+GLT G HGFH+H++GDNT GC S Sbjct: 1 MAMKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NPH K HG P DEERHVGDLGNVTA +G +V + D VISL G +SIIGR++V+ Sbjct: 61 AGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE +DDLGKGG+E S TGNAG RLACGV+GI + Sbjct: 121 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>sp|Q8HXQ0|SODC_MACMU Superoxide dismutase [Cu-Zn] sp|Q8HXQ2|SODC_MACFU Superoxide dismutase [Cu-Zn] sp|Q8HXQ1|SODC_MACFA Superoxide dismutase [Cu-Zn] Length = 154 Score = 207 bits (528), Expect = 1e-53 Identities = 97/154 (62%), Positives = 116/154 (75%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + + GTI F Q +S GPV++ I+GLT G HGFH+H+FGDNT GC S Sbjct: 1 MAMKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NP + HG P DEERHVGDLGNVTA +G V D+VISL G +SIIGR+LV+ Sbjct: 61 AGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE DDLGKGG+E SK TGNAGGRLACGV+GI + Sbjct: 121 HEKADDLGKGGNEESKKTGNAGGRLACGVIGIAQ 154
>sp|Q8HXP8|SODC_CALJA Superoxide dismutase [Cu-Zn] Length = 154 Score = 205 bits (522), Expect = 5e-53 Identities = 96/154 (62%), Positives = 116/154 (75%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + + GTI F Q +S GPV++ I+GL G HGFH+H+FGDNT GC S Sbjct: 1 MAMKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NP + HG P DEERHVGDLGNVTA +G V + D+VISL G +SIIGR+LV+ Sbjct: 61 AGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE DDLGKGG+E SK TGNAGGRLACGV+GI + Sbjct: 121 HEKADDLGKGGNEESKKTGNAGGRLACGVIGIAQ 154
>sp|Q8HXQ3|SODC_HYLLA Superoxide dismutase [Cu-Zn] Length = 154 Score = 204 bits (520), Expect = 8e-53 Identities = 95/154 (61%), Positives = 115/154 (74%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + + G I F Q +S GPV++ I+GLT G HGFH+H+FGDNT GC S Sbjct: 1 MAMKAVCVLKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NP + HG P DEERHVGDLGNVTAD +G V + D+VISL G +SIIGR+LV+ Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE DDLGKGG+E S TGNAG RLACGV+GI + Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>sp|O65199|SODCP_VITVI Superoxide dismutase [Cu-Zn], chloroplast precursor Length = 212 Score = 204 bits (520), Expect = 8e-53 Identities = 95/158 (60%), Positives = 117/158 (74%) Frame = +1 Query: 4 IQFLIMTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNT 183 + + +T AV VLK ++ G + SQ D G P + V I+GLTPGNHGFH+HEFGD T Sbjct: 54 LSVVAVTKKAVAVLKGTSSVEGVVTLSQEDDG-PTTVSVRITGLTPGNHGFHLHEFGDTT 112 Query: 184 NGCISAGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIG 363 NGC+S GAH+NP+G THGAP D+ RH GDLGN+ A++ G + DT I L GP ++IG Sbjct: 113 NGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIG 172 Query: 364 RSLVIHENEDDLGKGGHETSKTTGNAGGRLACGVVGIT 477 R+LV+HE EDDLGKGGHE S TTGNAGGRLACGVVG+T Sbjct: 173 RALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLT 210
>sp|P07632|SODC_RAT Superoxide dismutase [Cu-Zn] Length = 154 Score = 202 bits (515), Expect = 3e-52 Identities = 92/154 (59%), Positives = 114/154 (74%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M + AVCVLK + + G I F Q SG PV + +I+GLT G HGFH+H++GDNT GC + Sbjct: 1 MAMKAVCVLKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTT 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NPH K HG P DEERHVGDLGNV A +G +V + D VISL G +SIIGR++V+ Sbjct: 61 AGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE +DDLGKGG+E S TGNAG RLACGV+GI + Sbjct: 121 HEKQDDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>sp|P41973|SODC_DROWI Superoxide dismutase [Cu-Zn] Length = 153 Score = 202 bits (514), Expect = 4e-52 Identities = 91/154 (59%), Positives = 117/154 (75%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M V AVCV+ + GT+ F Q D+G PV++ E++GL G HGFH+HEFGDNTNGC+S Sbjct: 1 MVVKAVCVINGDAK--GTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMS 58 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 +G H+NPH K HGAP DE RH+GDLGN+ A +G +V ++D+ I+LVG SIIGR++V+ Sbjct: 59 SGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVV 118 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 H + DDLGKGGHE SKTTGNAG R+ CGV+GI K Sbjct: 119 HADPDDLGKGGHELSKTTGNAGARIGCGVIGIAK 152
>sp|P00441|SODC_HUMAN Superoxide dismutase [Cu-Zn] sp|P60052|SODC_PANTR Superoxide dismutase [Cu-Zn] Length = 154 Score = 201 bits (511), Expect = 9e-52 Identities = 95/154 (61%), Positives = 112/154 (72%) Frame = +1 Query: 19 MTVHAVCVLKNEQNLNGTIKFSQNDSGGPVELEVEISGLTPGNHGFHIHEFGDNTNGCIS 198 M AVCVLK + + G I F Q +S GPV++ I GLT G HGFH+HEFGDNT GC S Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60 Query: 199 AGAHYNPHGKTHGAPCDEERHVGDLGNVTADSNGKVSVKLSDTVISLVGPYSIIGRSLVI 378 AG H+NP + HG P DEERHVGDLGNVTAD +G V + D+VISL G + IIGR+LV+ Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVV 120 Query: 379 HENEDDLGKGGHETSKTTGNAGGRLACGVVGITK 480 HE DDLGKGG+E S TGNAG RLACGV+GI + Sbjct: 121 HEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,614,808 Number of Sequences: 369166 Number of extensions: 1202170 Number of successful extensions: 3448 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3263 length of database: 68,354,980 effective HSP length: 103 effective length of database: 49,327,275 effective search space used: 3699545625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)