Planaria EST Database

DrC_00597

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00597
         (1221 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8WQ47|TBA_LEPDS  Tubulin alpha chain (Allergen Lep d ?)       665   0.0  
sp|P18258|TBA1_PARLI  Tubulin alpha-1 chain                       664   0.0  
sp|P06603|TBA1_DROME  Tubulin alpha-1 chain                       664   0.0  
sp|P18288|TBAT_ONCMY  Tubulin alpha chain, testis-specific        662   0.0  
sp|P68369|TBA1_MOUSE  Tubulin alpha-1 chain (Alpha-tubulin 1...   662   0.0  
sp|P36220|TBA_TORMA  Tubulin alpha chain (Alpha T6)               661   0.0  
sp|P41383|TBA2_PATVU  Tubulin alpha-2/alpha-4 chain               660   0.0  
sp|P68361|TBA1_CRIGR  Tubulin alpha-1 chain (Alpha-tubulin 1...   660   0.0  
sp|Q94572|TBA3_HOMAM  Tubulin alpha-3 chain (Alpha-III tubulin)   660   0.0  
sp|P06605|TBA3_DROME  Tubulin alpha-3 chain                       659   0.0  

>sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain (Allergen Lep d ?)
          Length = 450

 Score =  665 bits (1717), Expect = 0.0
 Identities = 316/406 (77%), Positives = 366/406 (90%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K   TGD  +F+TFF+E G+ + VPR+V++DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGTGDD-SFNTFFSETGSGKHVPRAVYVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE++D  +D+IRKL++QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PLVTYAPVISS+KA HEQL+VSEITN CF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
          Length = 452

 Score =  664 bits (1712), Expect = 0.0
 Identities = 318/406 (78%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYTVGKELID  +D+IRKL++QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PL TYAPVIS++KA HEQL+VSEITNACF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
          Length = 450

 Score =  664 bits (1712), Expect = 0.0
 Identities = 316/406 (77%), Positives = 364/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTVGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE++D  +D+IRKL++QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC+LYRGDVV KD
Sbjct: 268  PLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
          Length = 450

 Score =  662 bits (1708), Expect = 0.0
 Identities = 315/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE++D  +D++RKLS+QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PLVTYAPVIS++KA HE LSV+EITNACF+P NQMVKC+P+ GKYMACC+LYRGDVV KD
Sbjct: 268  PLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
            M-alpha-1)
 sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
 sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
 sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
          Length = 451

 Score =  662 bits (1707), Expect = 0.0
 Identities = 316/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE+ID  +D+IRKL++QCTGLQGFLVFH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE 433

>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
          Length = 451

 Score =  661 bits (1705), Expect = 0.0
 Identities = 316/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE+ID  +D+IRKL++QCTGLQGFLVFH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PL TYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE 433

>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
          Length = 452

 Score =  660 bits (1703), Expect = 0.0
 Identities = 315/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYTVGKE+ID  +D+IRKL++QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PL TYAPVIS++KA HEQL+V+EITNACF+P NQMVKC+P+ GKYM+CC+LYRGDVV KD
Sbjct: 268  PLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
 sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
            K-alpha-1)
 sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
            M-alpha-2)
 sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
 sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
          Length = 451

 Score =  660 bits (1702), Expect = 0.0
 Identities = 315/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE+ID  +D+IRKL++QCTGLQGFLVFH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEARED+AALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYE 433

>sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin)
          Length = 451

 Score =  660 bits (1702), Expect = 0.0
 Identities = 317/406 (78%), Positives = 360/406 (88%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF E G  + VPR+VF+DLEPTV+DEIRTG YRQL+
Sbjct: 29   GIQPDGQMPSDKTIGGGDD-SFNTFFCETGAGKHVPRAVFVDLEPTVIDEIRTGVYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE++D  +D+IRKL++ C GLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFAIYP+P +ATAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PLVTYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKYMACCLLYRGDVV KD
Sbjct: 268  PLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVSRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 433

>sp|P06605|TBA3_DROME Tubulin alpha-3 chain
          Length = 450

 Score =  659 bits (1701), Expect = 0.0
 Identities = 314/406 (77%), Positives = 363/406 (89%)
 Frame = +3

Query: 3    GIQNNGIQLQEKREETGDSKTFSTFFNECGNYRFVPRSVFIDLEPTVLDEIRTGSYRQLY 182
            GIQ +G    +K    GD  +F+TFF+E G  + VPR+VF+DLEPTV+DE+RTG+YRQL+
Sbjct: 29   GIQPDGQMPSDKTVGGGDD-SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLF 87

Query: 183  HPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFLVFHXXXXXXXX 362
            HPE LI+GKEDAANNYARGHYT+GKE++D  +D+IRKL++QCTGLQGFL+FH        
Sbjct: 88   HPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGS 147

Query: 363  XXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLEHTDCAFLADNE 542
                LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTHTTLEH+DCAF+ DNE
Sbjct: 148  GFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNE 207

Query: 543  AIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 722
            AIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
Sbjct: 208  AIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF 267

Query: 723  PLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACCLLYRGDVVSKD 902
            PLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVK +P+ GKYMACC+LYRGDVV KD
Sbjct: 268  PLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKVDPRHGKYMACCMLYRGDVVPKD 327

Query: 903  VSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVKRSLCMLSNTTAIVEA 1082
            V++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+R++CMLSNTTAI EA
Sbjct: 328  VNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387

Query: 1083 WSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 1220
            W+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE
Sbjct: 388  WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,929,746
Number of Sequences: 369166
Number of extensions: 2681507
Number of successful extensions: 6870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6544
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13911618025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00597

  1. Dr_sW_015_J10
  2. Dr_sW_016_B01
  3. Dr_sW_007_F07
  4. Dr_sW_020_H11