Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_B01
(860 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 485 e-137
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 485 e-137
sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain (Allergen Lep d ?) 484 e-136
sp|Q25008|TBA1_HOMAM Tubulin alpha-1 chain (Alpha-I tubulin) 484 e-136
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 484 e-136
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 484 e-136
sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin) 484 e-136
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 483 e-136
sp|P52273|TBA_BOMMO Tubulin alpha chain 482 e-136
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 482 e-136
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 485 bits (1249), Expect = e-137
Identities = 228/281 (81%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYTVGKELID +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDIVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPL TYAPVIS++KA HEQL+VSEITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 485 bits (1248), Expect = e-137
Identities = 226/281 (80%), Positives = 258/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
>sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain (Allergen Lep d ?)
Length = 450
Score = 484 bits (1247), Expect = e-136
Identities = 226/281 (80%), Positives = 258/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVISS+KA HEQL+VSEITN CF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINY 357
>sp|Q25008|TBA1_HOMAM Tubulin alpha-1 chain (Alpha-I tubulin)
Length = 451
Score = 484 bits (1247), Expect = e-136
Identities = 226/281 (80%), Positives = 258/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+R+G YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRSGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFA+YP+P +ATAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVATAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RP+YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIANIK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINY 357
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 484 bits (1245), Expect = e-136
Identities = 225/281 (80%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D++RKLS+QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRVRKLSDQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVIS++KA HE LSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 484 bits (1245), Expect = e-136
Identities = 227/281 (80%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE+ID +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
VFH LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
>sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin)
Length = 451
Score = 484 bits (1245), Expect = e-136
Identities = 228/281 (81%), Positives = 256/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
EIRTG YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D+IRKL++ C GLQGFL
Sbjct: 77 EIRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDIVLDRIRKLADNCAGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFAIYP+P +ATAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 483 bits (1243), Expect = e-136
Identities = 227/281 (80%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE+ID +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
VFH LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPL TYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 482 bits (1241), Expect = e-136
Identities = 225/281 (80%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE++D +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 IFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+ PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NY
Sbjct: 317 MLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINY 357
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 482 bits (1240), Expect = e-136
Identities = 226/281 (80%), Positives = 257/281 (91%)
Frame = +2
Query: 17 EIRTGSYRQLYHPELLISGKEDAANNYARGHYTVGKELIDHTVDQIRKLSEQCTGLQGFL 196
E+RTG+YRQL+HPE LI+GKEDAANNYARGHYT+GKE+ID +D+IRKL++QCTGLQGFL
Sbjct: 77 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFL 136
Query: 197 VFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTHTTLE 376
VFH LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTHTTLE
Sbjct: 137 VFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
Query: 377 HTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQ 556
H+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQ
Sbjct: 197 HSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQ 256
Query: 557 TNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKYMACC 736
TNLVPYPRIHFPL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKYMACC
Sbjct: 257 TNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316
Query: 737 LLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNY 859
LLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NY
Sbjct: 317 LLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINY 357
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,561,221
Number of Sequences: 369166
Number of extensions: 1935943
Number of successful extensions: 4787
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4694
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)