Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_H11
(905 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin) 528 e-149
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 525 e-149
sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain (Allergen Lep d ?) 525 e-149
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 524 e-148
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 524 e-148
sp|Q25008|TBA1_HOMAM Tubulin alpha-1 chain (Alpha-I tubulin) 524 e-148
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 523 e-148
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 523 e-148
sp|P52273|TBA_BOMMO Tubulin alpha chain 523 e-148
sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6) 522 e-148
>sp|Q94572|TBA3_HOMAM Tubulin alpha-3 chain (Alpha-III tubulin)
Length = 451
Score = 528 bits (1359), Expect = e-149
Identities = 251/301 (83%), Positives = 277/301 (92%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFAIYP+P +ATAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVATAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V
Sbjct: 313 MACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVS 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 525 bits (1353), Expect = e-149
Identities = 249/301 (82%), Positives = 277/301 (92%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACC+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|Q8WQ47|TBA_LEPDS Tubulin alpha chain (Allergen Lep d ?)
Length = 450
Score = 525 bits (1352), Expect = e-149
Identities = 249/301 (82%), Positives = 277/301 (92%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVISS+KA HEQL+VSEITN CF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 524 bits (1350), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFA+YP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPL TYAPVIS++KA HEQL+VSEITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 524 bits (1349), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACC+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|Q25008|TBA1_HOMAM Tubulin alpha-1 chain (Alpha-I tubulin)
Length = 451
Score = 524 bits (1349), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFA+YP+P +ATAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVATAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RP+YTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIANIK+K+ IQFVDWCPTGFKVG+NYQP T VPG DLA+V
Sbjct: 313 MACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVS 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEF+EAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 523 bits (1348), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVIS++KA HE LSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACC+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 523 bits (1347), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFLVFH LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPL TYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 523 bits (1346), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFL+FH LLMERLS+DYGKKSKLEFAIYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+ PTYTNLNRL+GQIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPLVTYAPVIS++KA HEQLSV+EITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACC+LYRGDVV KDV++AIA IK+K+ IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
>sp|P36220|TBA_TORMA Tubulin alpha chain (Alpha T6)
Length = 451
Score = 522 bits (1345), Expect = e-148
Identities = 248/301 (82%), Positives = 276/301 (91%)
Frame = +2
Query: 2 QGFLVFHXXXXXXXXXXXXLLMERLSIDYGKKSKLEFAIYPSPSMATAVVEPYNSILTTH 181
QGFLVFH LLMERLS+DYGKKSKLEF+IYP+P ++TAVVEPYNSILTTH
Sbjct: 133 QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 192
Query: 182 TTLEHTDCAFLADNEAIYDICRRNLDIDRPTYTNLNRLVGQIVSSITASLRFDGALNVDL 361
TTLEH+DCAF+ DNEAIYDICRRNLDI+RPTYTNLNRL+ QIVSSITASLRFDGALNVDL
Sbjct: 193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDL 252
Query: 362 TEFQTNLVPYPRIHFPLVTYAPVISSQKANHEQLSVSEITNACFDPYNQMVKCNPKEGKY 541
TEFQTNLVPYPRIHFPL TYAPVIS++KA HEQLSVSEITNACF+P NQMVKC+P+ GKY
Sbjct: 253 TEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKY 312
Query: 542 MACCLLYRGDVVSKDVSSAIANIKSKKNIQFVDWCPTGFKVGLNYQPSTQVPGGDLAQVK 721
MACCLLYRGDVV KDV++AIA IK+K++IQFVDWCPTGFKVG+NYQP T VPGGDLA+V+
Sbjct: 313 MACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 372
Query: 722 RSLCMLSNTTAIVEAWSRLNRKFDLMFAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 901
R++CMLSNTTAI EAW+RL+ KFDLM+AKRAFVHWYVGEGMEEGEFSEARED+AALEKDY
Sbjct: 373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDY 432
Query: 902 E 904
E
Sbjct: 433 E 433
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,944,504
Number of Sequences: 369166
Number of extensions: 1920446
Number of successful extensions: 5008
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4731
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9174518830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)