DrC_00476
- Cluster detail
- GO Category : Not Available
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00476 (1313 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P57780|ACTN4_MOUSE Alpha-actinin 4 (Non-muscle alpha-act... 361 2e-99 sp|O43707|ACTN4_HUMAN Alpha-actinin 4 (Non-muscle alpha-act... 360 5e-99 sp|Q9QXQ0|ACTN4_RAT Alpha-actinin 4 (Non-muscle alpha-actin... 358 2e-98 sp|Q9Z1P2|ACTN1_RAT Alpha-actinin 1 (Alpha-actinin cytoskel... 354 3e-97 sp|P12814|ACTN1_HUMAN Alpha-actinin 1 (Alpha-actinin cytosk... 353 8e-97 sp|P05094|ACTN1_CHICK Alpha-actinin 1 (Alpha-actinin cytosk... 353 8e-97 sp|Q7TPR4|ACTN1_MOUSE Alpha-actinin 1 (Alpha-actinin cytosk... 352 1e-96 sp|Q90734|ACTN4_CHICK Alpha-actinin 4 (Non-muscle alpha-act... 351 2e-96 sp|P18091|ACTN_DROME Alpha-actinin, sarcomeric (F-actin cro... 344 4e-94 sp|Q08043|ACTN3_HUMAN Alpha-actinin 3 (Alpha actinin skelet... 342 1e-93
>sp|P57780|ACTN4_MOUSE Alpha-actinin 4 (Non-muscle alpha-actinin 4) (F-actin cross linking protein) Length = 912 Score = 361 bits (927), Expect = 2e-99 Identities = 187/390 (47%), Positives = 265/390 (67%), Gaps = 3/390 (0%) Frame = +3 Query: 6 LEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKL 185 LE IDQ+ L+YAK+ APF NW+E A EDLQD I+ I+E++ LI D+FK ++ +A Sbjct: 524 LETIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADR 583 Query: 186 EYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKELS 365 E + + + + A N++ NPYT ++ ++ + K+ L+P RD L +E S Sbjct: 584 EREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQS 643 Query: 366 QQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEYR 545 +Q NE LR F S AN +GPWI K + I +S N TLE Q S ++ E I +Y+ Sbjct: 644 KQQSNEHLRRQFASQANMVGPWIQTKMEEIGRISIEMN-GTLEDQLSHLKQYERSIVDYK 702 Query: 546 KLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSKG 725 +++ Q +Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+KG Sbjct: 703 PSLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKG 762 Query: 726 ISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNLKEEK-GEADFAKIMSEVDPN 902 ISQ QM EFR FNHFDK+ L P+EFKACL+SLG +++ ++ G+A+F +IMS VDPN Sbjct: 763 ISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPN 822 Query: 903 RSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCIA 1082 SG+VTF AFID+M++ETT+ DT +Q++ SFKVL D+++ITAEELRRELP +AEYCIA Sbjct: 823 HSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIA 882 Query: 1083 NMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 MAPY PD GALDYK F+++LYG SDL Sbjct: 883 RMAPYQGPDAAPGALDYKSFSTALYGESDL 912
Score = 39.7 bits (91), Expect = 0.020
Identities = 48/246 (19%), Positives = 103/246 (41%), Gaps = 10/246 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E + + DY + + WI + L+D I E++ +E ++++ + K++
Sbjct: 290 QENEHLMEDYERLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQ 349
Query: 189 YNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NK----LSDLLPLRDEFLQK 356
+ +I L+ L ++S P + S+ + + N L +E+L
Sbjct: 350 ----EKCQLEINFNTLQTKL-RLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLN 404
Query: 357 ELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQI---EHLET 527
E+ + + + L E F A+ W D K+ + +TL K+ I E E+
Sbjct: 405 EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLK--QRDYETATLSDIKALIRKHEAFES 462
Query: 528 EINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQS---SMRRSKSEIED 698
++ ++ ++ +QEL + +++ N + + W+ L S S R + + E
Sbjct: 463 DLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDNLGSLTHSRREALEKTEK 522
Query: 699 QILTRD 716
Q+ T D
Sbjct: 523 QLETID 528
>sp|O43707|ACTN4_HUMAN Alpha-actinin 4 (Non-muscle alpha-actinin 4) (F-actin cross linking protein) Length = 911 Score = 360 bits (924), Expect = 5e-99 Identities = 188/390 (48%), Positives = 265/390 (67%), Gaps = 3/390 (0%) Frame = +3 Query: 6 LEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKL 185 LE IDQ+ L+YAK+ APF NW+E A EDLQD I+ I+E++ LI D+FK ++ +A Sbjct: 523 LEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADR 582 Query: 186 EYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKELS 365 E + + + + A N++ NPYT ++ ++ + K+ L+P RD L +E S Sbjct: 583 EREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQS 642 Query: 366 QQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEYR 545 +Q NE LR F S AN +GPWI K + I +S N TLE Q S ++ E I +Y+ Sbjct: 643 KQQSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMN-GTLEDQLSHLKQYERSIVDYK 701 Query: 546 KLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSKG 725 +++ Q +Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+KG Sbjct: 702 PNLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKG 761 Query: 726 ISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNLKEEK-GEADFAKIMSEVDPN 902 ISQ QM EFR FNHFDK+ L P+EFKACL+SLG +++ ++ GEA+F +IMS VDPN Sbjct: 762 ISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLGYDVENDRQGEAEFNRIMSLVDPN 821 Query: 903 RSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCIA 1082 SG+VTF AFID+M++ETT+ DT +Q++ SFKVL D+++ITAEELRRELP +AEYCIA Sbjct: 822 HSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIA 881 Query: 1083 NMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 MAPY PD GALDYK F+++LYG SDL Sbjct: 882 RMAPYQGPDAVPGALDYKSFSTALYGESDL 911
Score = 40.0 bits (92), Expect = 0.015
Identities = 53/276 (19%), Positives = 117/276 (42%), Gaps = 12/276 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E + + DY K + WI + L+D I E++ +E ++++ + K++
Sbjct: 289 QENEHLMEDYEKLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQ 348
Query: 189 YNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NK----LSDLLPLRDEFLQK 356
+ +I L+ L ++S P + S+ + + N L +E+L
Sbjct: 349 ----EKCQLEINFNTLQTKL-RLSNRPAFMPSEGKMVSDINNGWQHLEQAEKGYEEWLLN 403
Query: 357 ELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQI---EHLET 527
E+ + + + L E F A+ W D K+ + + +TL K+ I E E+
Sbjct: 404 EIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLKH--RDYETATLSDIKALIRKHEAFES 461
Query: 528 EINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQS---SMRRSKSEIED 698
++ ++ ++ +QEL + +++ N + + W+ L S S R + + E
Sbjct: 462 DLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEK 521
Query: 699 QILTRDSKGISQSQMDEFRRC--FNHFDKNKTRTLE 800
Q+ + I Q ++ +R FN++ ++ L+
Sbjct: 522 QL-----EAIDQLHLEYAKRAAPFNNWMESAMEDLQ 552
>sp|Q9QXQ0|ACTN4_RAT Alpha-actinin 4 (Non-muscle alpha-actinin 4) (F-actin cross linking protein) Length = 911 Score = 358 bits (918), Expect = 2e-98 Identities = 186/390 (47%), Positives = 263/390 (67%), Gaps = 3/390 (0%) Frame = +3 Query: 6 LEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKL 185 LE IDQ+ L+YAK+ APF NW+E A EDLQD I+ I+E++ LI D+FK ++ +A Sbjct: 523 LETIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADR 582 Query: 186 EYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKELS 365 E + + + + A N++ NPYT ++ ++ + K+ L+P RD L +E S Sbjct: 583 EREAILAIHKEAQRIAESNHIKLSGSNPYTSVTPQIINSKWEKVQQLVPKRDHALLEEQS 642 Query: 366 QQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEYR 545 +Q NE LR F S AN +GPWI K + I +S N TLE Q S ++ E I +Y+ Sbjct: 643 KQQSNEHLRRQFASQANMVGPWIQTKMEEIGRISIEMN-GTLEDQLSHLKQYERSIVDYK 701 Query: 546 KLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSKG 725 +++ Q +Q+ +IF+ + Y+ME LRV WEQL +++ R+ +E+E+QILTRD+KG Sbjct: 702 PNLDLLEQQHQLIQEALIFDNKHTNYTMEHLRVGWEQLLTTIARTINEVENQILTRDAKG 761 Query: 726 ISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNLKEEK-GEADFAKIMSEVDPN 902 ISQ QM EFR FNHFDK+ L P+EFK CL+SLG +++ ++ G+A+F +IMS VDPN Sbjct: 762 ISQEQMQEFRASFNHFDKDHGGALGPEEFKGCLISLGYDVENDRQGDAEFNRIMSVVDPN 821 Query: 903 RSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCIA 1082 SG+VTF AFID+M+KETT+ DT +Q++ SFKVL D+++IT EELR+ELP +AEYCIA Sbjct: 822 HSGLVTFQAFIDFMSKETTDTDTADQVIGSFKVLAGDKNFITVEELRKELPPDQAEYCIA 881 Query: 1083 NMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 MAPY PD GALDYK F+++LYG SDL Sbjct: 882 RMAPYQGPDAAPGALDYKSFSTALYGESDL 911
Score = 40.4 bits (93), Expect = 0.011
Identities = 48/246 (19%), Positives = 104/246 (42%), Gaps = 10/246 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E + + DY + + WI + L+D I E++ +E ++++ + K++
Sbjct: 289 QENEHLMEDYERLASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQ 348
Query: 189 YNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NK----LSDLLPLRDEFLQK 356
+ +I L+ L ++S P + S+ + + N L +E+L
Sbjct: 349 ----EKCQLEINFNTLQTKL-RLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLN 403
Query: 357 ELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQI---EHLET 527
E+ + + + L E F A+ W D K+ + + +TL K+ I E E+
Sbjct: 404 EIPRLERLDHLAEKFRQKASIHEAWTDGKEAMLKHRDY--ETATLSDIKALIRKHEAFES 461
Query: 528 EINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQS---SMRRSKSEIED 698
++ ++ ++ +QEL + +++ N + + W+ L S S R + + E
Sbjct: 462 DLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKICDQWDNLGSLTHSRREALEKTEK 521
Query: 699 QILTRD 716
Q+ T D
Sbjct: 522 QLETID 527
>sp|Q9Z1P2|ACTN1_RAT Alpha-actinin 1 (Alpha-actinin cytoskeletal isoform) (Non-muscle alpha-actinin 1) (F-actin cross linking protein) Length = 892 Score = 354 bits (909), Expect = 3e-97 Identities = 183/391 (46%), Positives = 268/391 (68%), Gaps = 3/391 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 LLE IDQ+ L+YAK+ APF NW+E A EDLQD+ I+ I+E++ L ++FK ++ +A Sbjct: 503 LLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDAD 562 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E + + +++ ++N NPYT ++ ++ + + + L+P RD+ L +E Sbjct: 563 KERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEH 622 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 S+Q NE+LR+ FG+ AN +GPWI K + I +S E TLE Q S + E I Y Sbjct: 623 SRQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISI-EMHGTLEDQLSHLRQYEKSIVNY 681 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + +++ Q +Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+K Sbjct: 682 KPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAK 741 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNL-KEEKGEADFAKIMSEVDP 899 GISQ QM+EFR FNHFD++ + TL P+EFKACL+SLG ++ + +GEA+FA+IMS VDP Sbjct: 742 GISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDP 801 Query: 900 NRSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCI 1079 NR GVVTF AFID+M++ET + DT +Q++ SFK+L D++YIT +ELRRELP +AEYCI Sbjct: 802 NRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITGDELRRELPPDQAEYCI 861 Query: 1080 ANMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 A MAPY PD GALDY F+++LYG SDL Sbjct: 862 ARMAPYAGPDSVPGALDYMSFSTALYGESDL 892
Score = 38.1 bits (87), Expect = 0.057
Identities = 41/240 (17%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E +Q+ DY K + WI + L++ + + ++ + +K ++F+ +
Sbjct: 270 QENEQLMEDYEKLASDLLEWIRRTIPWLENR---VPENTMQAMQQKLEDFR--------D 318
Query: 189 YNMLNQVDSQIKNRALENNLN------QISENPYTLLSQTALSVE*NKLSDLLPLRD--- 341
Y L++ + LE N N ++S P + S+ + + N L +
Sbjct: 319 YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQAEKGY 378
Query: 342 -EFLQKELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLS-SGENVSTLESQKSQIE 515
E+L E+ + + + L E F A+ W D K+ + +S +++ + E
Sbjct: 379 EEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHE 438
Query: 516 HLETEINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIE 695
E+++ ++ ++ +QEL + +++P+ + + W+ L + ++ + +E
Sbjct: 439 AFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALE 498
Score = 31.2 bits (69), Expect = 6.9
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 354 KELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEI 533
K L+ +NE+L E++ LA+ L WI ++ I +L + +T+++ + ++E +
Sbjct: 264 KVLAVNQENEQLMEDYEKLASDLLEWI---RRTIPWLENRVPENTMQAMQQKLE----DF 316
Query: 534 NEYRKL---AMEVDKCSQELQQNMI 599
+YR+L +KC E+ N +
Sbjct: 317 RDYRRLHKPPKVQEKCQLEINFNTL 341
>sp|P12814|ACTN1_HUMAN Alpha-actinin 1 (Alpha-actinin cytoskeletal isoform) (Non-muscle alpha-actinin 1) (F-actin cross linking protein) Length = 892 Score = 353 bits (905), Expect = 8e-97 Identities = 182/391 (46%), Positives = 268/391 (68%), Gaps = 3/391 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 LLE IDQ+ L+YAK+ APF NW+E A EDLQD+ I+ I+E++ L ++FK ++ +A Sbjct: 503 LLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDAD 562 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E + + +++ ++N NPYT ++ ++ + + + L+P RD+ L +E Sbjct: 563 KERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEH 622 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 ++Q NE+LR+ FG+ AN +GPWI K + I +S E TLE Q S + E I Y Sbjct: 623 ARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISI-EMHGTLEDQLSHLRQYEKSIVNY 681 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + +++ Q +Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+K Sbjct: 682 KPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAK 741 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNL-KEEKGEADFAKIMSEVDP 899 GISQ QM+EFR FNHFD++ + TL P+EFKACL+SLG ++ + +GEA+FA+IMS VDP Sbjct: 742 GISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDP 801 Query: 900 NRSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCI 1079 NR GVVTF AFID+M++ET + DT +Q++ SFK+L D++YIT +ELRRELP +AEYCI Sbjct: 802 NRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQAEYCI 861 Query: 1080 ANMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 A MAPY PD GALDY F+++LYG SDL Sbjct: 862 ARMAPYTGPDSVPGALDYMSFSTALYGESDL 892
Score = 37.7 bits (86), Expect = 0.074
Identities = 41/240 (17%), Positives = 102/240 (42%), Gaps = 11/240 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E +Q+ DY K + WI + L++ + + + + +K ++F+ +
Sbjct: 270 QENEQLMEDYEKLASDLLEWIRRTIPWLENR---VPENTMHAMQQKLEDFR--------D 318
Query: 189 YNMLNQVDSQIKNRALENNLN------QISENPYTLLSQTALSVE*NK----LSDLLPLR 338
Y L++ + LE N N ++S P + S+ + + N L +
Sbjct: 319 YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGY 378
Query: 339 DEFLQKELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLS-SGENVSTLESQKSQIE 515
+E+L E+ + + + L E F A+ W D K+ + +S +++ + E
Sbjct: 379 EEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHE 438
Query: 516 HLETEINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIE 695
E+++ ++ ++ +QEL + +++P+ + + W+ L + ++ + +E
Sbjct: 439 AFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALE 498
>sp|P05094|ACTN1_CHICK Alpha-actinin 1 (Alpha-actinin cytoskeletal isoform) (Non-muscle alpha-actinin 1) (F-actin cross linking protein) Length = 893 Score = 353 bits (905), Expect = 8e-97 Identities = 180/391 (46%), Positives = 268/391 (68%), Gaps = 3/391 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 LLE IDQ+ L+YAK+ APF NW+E A EDLQD+ I+ I+E++ L ++FK ++ +A Sbjct: 504 LLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDAD 563 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E + + +++ ++N NPYT ++ ++ + + L+P RD+ L +E Sbjct: 564 KERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEH 623 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 ++Q +NE+LR+ FG+ AN +GPWI K + I +S E TLE Q + + E I Y Sbjct: 624 ARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISI-EMHGTLEDQLNHLRQYEKSIVNY 682 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + +++ Q++Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+K Sbjct: 683 KPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAK 742 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNL-KEEKGEADFAKIMSEVDP 899 GISQ QM+EFR FNHFD++ + TL P+EFKACL+SLG ++ + +GEA+FA+IMS VDP Sbjct: 743 GISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDAQGEAEFARIMSIVDP 802 Query: 900 NRSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCI 1079 NR GVVTF AFID+M++ET + DT +Q++ SFK+L D++YIT +ELRRELP +AEYCI Sbjct: 803 NRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCI 862 Query: 1080 ANMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 A MAPY D GALDY F+++LYG SDL Sbjct: 863 ARMAPYNGRDAVPGALDYMSFSTALYGESDL 893
Score = 37.0 bits (84), Expect = 0.13
Identities = 41/240 (17%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E +Q+ DY K + WI + L++ + ++ + +K ++F+ +
Sbjct: 271 QENEQLMEDYEKLASDLLEWIRRTIPWLENR---APENTMQAMQQKLEDFR--------D 319
Query: 189 YNMLNQVDSQIKNRALENNLN------QISENPYTLLSQTALSVE*NK----LSDLLPLR 338
Y L++ + LE N N ++S P + S+ + + N L
Sbjct: 320 YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNAWGGLEQAEKGY 379
Query: 339 DEFLQKELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLS-SGENVSTLESQKSQIE 515
+E+L E+ + + + L E F A+ W D K+ + +S +++ + E
Sbjct: 380 EEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHE 439
Query: 516 HLETEINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIE 695
E+++ ++ ++ +QEL + +++P+ + + W+ L + ++ + +E
Sbjct: 440 AFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALE 499
Score = 31.6 bits (70), Expect = 5.3
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 354 KELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEI 533
K L+ +NE+L E++ LA+ L WI ++ I +L + +T+++ + ++E +
Sbjct: 265 KVLAVNQENEQLMEDYEKLASDLLEWI---RRTIPWLENRAPENTMQAMQQKLE----DF 317
Query: 534 NEYRKL---AMEVDKCSQELQQNMI 599
+YR+L +KC E+ N +
Sbjct: 318 RDYRRLHKPPKVQEKCQLEINFNTL 342
>sp|Q7TPR4|ACTN1_MOUSE Alpha-actinin 1 (Alpha-actinin cytoskeletal isoform) (Non-muscle alpha-actinin 1) (F-actin cross linking protein) Length = 892 Score = 352 bits (904), Expect = 1e-96 Identities = 182/391 (46%), Positives = 268/391 (68%), Gaps = 3/391 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 LLE IDQ+ L+YAK+ APF NW+E A EDLQD+ I+ I+E++ L ++FK ++ +A Sbjct: 503 LLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDAD 562 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E + + +++ ++N NPYT ++ ++ + + + L+P RD+ L +E Sbjct: 563 KERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEH 622 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 ++Q NE+LR+ FG+ AN +GPWI K + I +S E TLE Q S + E I Y Sbjct: 623 ARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISI-EMHGTLEDQLSHLRQYEKSIVNY 681 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + +++ Q +Q+ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+K Sbjct: 682 KPKIDQLECDHQLIQEALIFDNKHTNYNMEHIRVGWEQLLTTIARTINEVENQILTRDAK 741 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNL-KEEKGEADFAKIMSEVDP 899 GISQ QM+EFR FNHFD++ + TL P+EFKACL+SLG ++ + +GEA+FA+IMS VDP Sbjct: 742 GISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDP 801 Query: 900 NRSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCI 1079 NR GVVTF AFID+M++ET + DT +Q++ SFK+L D++YIT +ELRRELP +AEYCI Sbjct: 802 NRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITEDELRRELPPDQAEYCI 861 Query: 1080 ANMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 A MAPY PD GALDY F+++LYG SDL Sbjct: 862 ARMAPYAGPDSVPGALDYMSFSTALYGESDL 892
Score = 37.4 bits (85), Expect = 0.097
Identities = 41/240 (17%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E +Q+ DY K + WI + L++ + + + + +K ++F+ +
Sbjct: 270 QENEQLMEDYEKLASDLLEWIRRTIPWLENR---VPENTMHAMQQKLEDFR--------D 318
Query: 189 YNMLNQVDSQIKNRALENNLN------QISENPYTLLSQTALSVE*NKLSDLLPLRD--- 341
Y L++ + LE N N ++S P + S+ + + N L +
Sbjct: 319 YRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQAEKGY 378
Query: 342 -EFLQKELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLS-SGENVSTLESQKSQIE 515
E+L E+ + + + L E F A+ W D K+ + +S +++ + E
Sbjct: 379 EEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHE 438
Query: 516 HLETEINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIE 695
E+++ ++ ++ +QEL + +++P+ + + W+ L + ++ + +E
Sbjct: 439 AFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALE 498
>sp|Q90734|ACTN4_CHICK Alpha-actinin 4 (Non-muscle alpha-actinin 4) (F-actin cross linking protein) Length = 904 Score = 351 bits (901), Expect = 2e-96 Identities = 183/390 (46%), Positives = 263/390 (67%), Gaps = 3/390 (0%) Frame = +3 Query: 6 LEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKL 185 LE ID++ L+YAK+ APF NW+E A EDLQD I+ I+E++ LI D+FK ++ +A Sbjct: 516 LETIDELHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLIAAHDQFKATLPDADR 575 Query: 186 EYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKELS 365 E + + + + A +++ NPYT ++ ++ + ++ L+P RD LQ E S Sbjct: 576 EREAILGIQREAQRIADLHSIKLSGNNPYTSVTPQVINSKWERVQQLVPTRDRALQDEQS 635 Query: 366 QQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEYR 545 +Q NE+LR F AN +GPW+ K + I +S E TLE Q ++H E I +Y+ Sbjct: 636 RQQCNERLRRQFAGQANIVGPWMQTKMEEIGRISI-EMHGTLEDQLQHLKHYEQSIVDYK 694 Query: 546 KLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSKG 725 ++ Q +++ +IF+ + Y+ME +RV WEQL +++ R+ +E+E+QILTRD+KG Sbjct: 695 PNLELLEHEHQLVEEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKG 754 Query: 726 ISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNLKEEK-GEADFAKIMSEVDPN 902 ISQ QM EFR FNHFDK+ L P+EFKACL+SLG +++ ++ G+A+F +IMS VDPN Sbjct: 755 ISQEQMQEFRASFNHFDKDHCGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSLVDPN 814 Query: 903 RSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCIA 1082 SG VTF AFID+M++ETT+ DT +Q++ SFKVL D++YITAEELRRELP +AEYCIA Sbjct: 815 GSGSVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNYITAEELRRELPPEQAEYCIA 874 Query: 1083 NMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 MAPY PD GALDYK F+++LYG SDL Sbjct: 875 RMAPYRGPDAAPGALDYKSFSTALYGESDL 904
Score = 39.7 bits (91), Expect = 0.020
Identities = 48/246 (19%), Positives = 103/246 (41%), Gaps = 10/246 (4%)
Frame = +3
Query: 9 EEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAKLE 188
+E + + DY K + WI + L+D I E++ +E ++++ + K++
Sbjct: 282 QENEHLMEDYEKLASDLLEWIRRTIPWLEDRSPQKTIQEMQQKLEDFRDYRRVHKPPKVQ 341
Query: 189 YNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*N----KLSDLLPLRDEFLQK 356
+ +I L+ L ++S P + S+ + + N L +E+L
Sbjct: 342 ----EKCQLEINFNTLQTKL-RLSNRPAFMPSEGRMVSDINTGWQHLEQAEKGYEEWLLN 396
Query: 357 ELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQI---EHLET 527
E+ + + L E F A+ W + K+ + +TL K+ I E E+
Sbjct: 397 EIRRLEPLDHLAEKFRQKASIHEAWTEGKEAMLK--QKDYETATLSDIKALIRKHEAFES 454
Query: 528 EINEYRKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQS---SMRRSKSEIED 698
++ ++ ++ +QEL + +++P+ + + W+ L S S R + + E
Sbjct: 455 DLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDVLGSLTHSRREALEKTEK 514
Query: 699 QILTRD 716
Q+ T D
Sbjct: 515 QLETID 520
>sp|P18091|ACTN_DROME Alpha-actinin, sarcomeric (F-actin cross linking protein) Length = 924 Score = 344 bits (882), Expect = 4e-94 Identities = 172/391 (43%), Positives = 263/391 (67%), Gaps = 3/391 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 +LE+ID + L++AK+ APF NW++ +EDL D I+ ++E++ LI+ D+FK ++ A Sbjct: 535 ILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIQAHDQFKATLGEAD 594 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E+N++ + ++++ ++ + ENPYT L+ ++ + + + L+P RD+ L EL Sbjct: 595 KEFNLIVNLVREVESIVKQHQIPGGLENPYTTLTANDMTRKWSDVRQLVPQRDQTLANEL 654 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 +Q NE LR F AN +GPWI+ + + + G S LE Q +++ E + Y Sbjct: 655 RKQQNNEMLRRQFAEKANIVGPWIERQMDAVTAIGMGLQGS-LEDQLHRLKEYEQAVYAY 713 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + E++K Q +Q++MIFE Y+METLRV WEQL +S+ R+ +E+E+QILTRDSK Sbjct: 714 KPNIEELEKIHQAVQESMIFENRYTNYTMETLRVGWEQLLTSINRNINEVENQILTRDSK 773 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNL-KEEKGEADFAKIMSEVDP 899 GISQ Q++EFR FNHFDKN+T L P+EFK+CLVSLG ++ K+ +G+ DF +I++ VDP Sbjct: 774 GISQEQLNEFRSSFNHFDKNRTGRLSPEEFKSCLVSLGYSIGKDRQGDLDFQRILAVVDP 833 Query: 900 NRSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCI 1079 N +G V F AF+D+M +E+T+ DT EQ++ SF++L D+ YI +ELRRELP +AEYCI Sbjct: 834 NNTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAADKPYILPDELRRELPPDQAEYCI 893 Query: 1080 ANMAPY--PDGGEGALDYKLFASSLYGHSDL 1166 M PY P+G GALDY F+++LYG +DL Sbjct: 894 QRMPPYKGPNGVPGALDYMSFSTALYGETDL 924
Score = 31.2 bits (69), Expect = 6.9
Identities = 35/196 (17%), Positives = 81/196 (41%), Gaps = 15/196 (7%)
Frame = +3
Query: 354 KELSQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQI-----EH 518
K L +NE+L E + LA+ L WI ++N + +++ ++ + + +H
Sbjct: 296 KVLKVNQENERLMEEYERLASDLLEWIRRTMPWLNSRQADNSLAGVQKKLEEYRTYRRKH 355
Query: 519 LETEINEYRKLAMEVDKCSQELQ-QNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIE 695
+ + KL + +L+ N P ++ + SW+ L+ ++ E
Sbjct: 356 KPPRVEQKAKLETNFNTLQTKLRLSNRPAYLPTEGKTVSDISNSWKGLE----LAEKAFE 411
Query: 696 DQILTRDSKGISQSQMDEFRRCFNH-------FDKNKTRTLEPKEFKACLVS--LGCNLK 848
+ +L ++ + +++ + F H + + K L+ ++F+ C ++ K
Sbjct: 412 EWLL---AETMRLERLEHLAQKFKHKADAHEDWTRGKEEMLQSQDFRQCKLNELKALKKK 468
Query: 849 EEKGEADFAKIMSEVD 896
E E+D A V+
Sbjct: 469 HEAFESDLAAHQDRVE 484
>sp|Q08043|ACTN3_HUMAN Alpha-actinin 3 (Alpha actinin skeletal muscle isoform 3) (F-actin cross linking protein) Length = 901 Score = 342 bits (877), Expect = 1e-93 Identities = 174/390 (44%), Positives = 258/390 (66%), Gaps = 2/390 (0%) Frame = +3 Query: 3 LLEEIDQMQLDYAKKIAPFYNWIEQAKEDLQDSHILLYIDEVKILIEKQDEFKKSMENAK 182 LLE IDQ+QL++A++ APF NW++ A EDLQD ++ ++E + L+ D+FK ++ A Sbjct: 517 LLETIDQLQLEFARRAAPFNNWLDGAVEDLQDVWLVHSVEETQSLLTAHDQFKATLPEAD 576 Query: 183 LEYNMLNQVDSQIKNRALENNLNQISENPYTLLSQTALSVE*NKLSDLLPLRDEFLQKEL 362 E + + +I+ L S NPY LS ++ + + + L+P RD+ LQ+EL Sbjct: 577 RERGAIMGIQGEIQKICQTYGLRPCSTNPYITLSPQDINTKWDMVRKLVPSRDQTLQEEL 636 Query: 363 SQQTKNEKLRENFGSLANKLGPWIDEKQQFINYLSSGENVSTLESQKSQIEHLETEINEY 542 ++Q NE+LR F + AN +GPWI K + + L++G +LE Q + + E I Y Sbjct: 637 ARQQVNERLRRQFAAQANAIGPWIQAKVEEVGRLAAG-LAGSLEEQMAGLRQQEQNIINY 695 Query: 543 RKLAMEVDKCSQELQQNMIFETPNCRYSMETLRVSWEQLQSSMRRSKSEIEDQILTRDSK 722 + ++ Q LQ++++F+ + YSME +RV WEQL +S+ R+ +E+E+Q+LTRD+K Sbjct: 696 KTNIDRLEGDHQLLQESLVFDNKHTVYSMEHIRVGWEQLLTSIARTINEVENQVLTRDAK 755 Query: 723 GISQSQMDEFRRCFNHFDKNKTRTLEPKEFKACLVSLGCNLKEEKGEADFAKIMSEVDPN 902 G+SQ Q++EFR FNHFD+ + +EP +F+ACL+S+G +L GE +FA+IM+ VDPN Sbjct: 756 GLSQEQLNEFRASFNHFDRKRNGMMEPDDFRACLISMGYDL----GEVEFARIMTMVDPN 811 Query: 903 RSGVVTFGAFIDYMAKETTEQDTLEQILQSFKVLCQDRDYITAEELRRELPSAEAEYCIA 1082 +GVVTF AFID+M +ET E DT EQ++ SFK+L D++YIT EELRRELP+ +AEYCI Sbjct: 812 AAGVVTFQAFIDFMTRETAETDTTEQVVASFKILAGDKNYITPEELRRELPAKQAEYCIR 871 Query: 1083 NMAPYPDGG--EGALDYKLFASSLYGHSDL 1166 M PY G GALDY F+S+LYG SDL Sbjct: 872 RMVPYKGSGAPAGALDYVAFSSALYGESDL 901
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,274,488
Number of Sequences: 369166
Number of extensions: 2533767
Number of successful extensions: 8951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8758
length of database: 68,354,980
effective HSP length: 114
effective length of database: 47,295,190
effective search space used: 15276346370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
