DrC_00251
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_00251 (877 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31... 141 3e-33 sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31... 140 6e-33 sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31... 136 9e-32 sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29... 114 5e-25 sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29... 113 6e-25 sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29... 113 8e-25 sp|P34562|YNP9_CAEEL Hypothetical GRIP and coiled-coil doma... 37 0.055 sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmus... 36 0.16 sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmus... 36 0.16 sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscl... 36 0.16
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 (BCR-associated protein Bap31) (p28 Bap31) (CDM protein) (6C6-AG tumor-associated antigen) (DXS1357E) Length = 246 Score = 141 bits (355), Expect = 3e-33 Identities = 85/235 (36%), Positives = 124/235 (52%), Gaps = 17/235 (7%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 MSLQW A+A FLY E+F+ LL IPFIS RW KIFKSR+++ L +Y + Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 60 Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414 DA+RE+ KY+ + K+ + + M+LFRAQRNLY++GFSL + F+LRR+V Sbjct: 61 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 120 Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEEE 552 LI+ + ++ K DV + + K EEE Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 180 Query: 553 ---LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQS 708 LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ+ Sbjct: 181 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQA 235
>sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31 (BCR-associated protein Bap31) Length = 246 Score = 140 bits (352), Expect = 6e-33 Identities = 84/235 (35%), Positives = 124/235 (52%), Gaps = 17/235 (7%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 MSLQW A+A FLY E+F+ LL IPFIS RW KIFKSR+++ + +Y + Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELVVSYGNTFFVVLIVILV 60 Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414 DA+RE+ KY+ + K+ + + M+LFRAQRNLY++GFSL + F+LRR+V Sbjct: 61 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 120 Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEEE 552 LI+ + ++ K DV + + K EEE Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 180 Query: 553 ---LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQS 708 LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ+ Sbjct: 181 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQA 235
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 (BCR-associated protein Bap31) (p28 Bap31) Length = 245 Score = 136 bits (342), Expect = 9e-32 Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 16/236 (6%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 MSLQW +A FLY E+F LL IPFIS RW K+FKSR+++ + Y + Sbjct: 1 MSLQWTTVATFLYAEVFAVLLLCIPFISPKRWQKVFKSRLVELVVTYGNTFFVVLIVILV 60 Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414 DA+RE++KY+ + K+ + + M+LFRAQRNLY++G SL + F+LRR+V Sbjct: 61 LLVIDAVREILKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGLSLLLSFLLRRLV 120 Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEE- 549 LI+ + ++ K D+ + + K EE Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAEDGDKLDIGNTEMKLEEN 180 Query: 550 -ELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKL 714 LK+ L D+LAS++K++ + E + ++KQ G K YD LLEEH LQ+ + Sbjct: 181 KSLKNDLRKLKDELASTKKKLEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQASV 236
>sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29 (BCR-associated protein Bap29) Length = 241 Score = 114 bits (284), Expect = 5e-25 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 14/234 (5%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 M+LQW A+A FLY E+ + L+F +PFI RW KIF + + + Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 Query: 235 XXXXDAIREVIKYNKME-YKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRM 411 DA+REV KY+ + + S D+ M+LFR+QRNLY+SGFSLF W VLRR+ Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK---------KSDVTDNKTKFEEE---- 552 V LIT + + ++ KS D + E E Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 Query: 553 LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKL 714 ++DQ ++ T+ L + +++ + D+ +K Q +K YD LL+EH LQ +L Sbjct: 181 VEDQQKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 233
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 (BCR-associated protein Bap29) Length = 241 Score = 113 bits (283), Expect = 6e-25 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 14/234 (5%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 M+LQW A+A FLY E+ + L+F +PFI RW KIF + + + Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60 Query: 235 XXXXDAIREVIKYNKME-YKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRM 411 DA+REV KY+ + + S D+ M+LFR+QRNLY+SGFSLF W VLRR+ Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK---------KSDVTDNKTKFEEE---- 552 V LIT + + ++ KS D + E E Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180 Query: 553 LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKL 714 ++DQ ++ T+ L + +++ + D+ +K Q +K YD LL+EH LQ +L Sbjct: 181 VEDQEKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL 233
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 (BCR-associated protein Bap29) Length = 240 Score = 113 bits (282), Expect = 8e-25 Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 19/239 (7%) Frame = +1 Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234 M++QW A+A FLY E+ + LLF +PFI RW KIF + + ++ Sbjct: 1 MTIQWAAVASFLYAEIGLILLFCLPFIPPQRWQKIFSFSVWGKIASFWNKAFLTIIILLI 60 Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEAT-ILMRLFRAQRNLYVSGFSLFMWFVLRRM 411 DA+REV KY+ + + S M+LFR+QRNLY+SGFSLF W VLRR+ Sbjct: 61 ILFLDAVREVRKYSSTNVVEKNSAIRPSAFEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120 Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLKKSD----------------VTDNKTKF 543 V LIT + + +++++ +NK Sbjct: 121 VTLITQLAKEIANKGVLKIQAENTNKAAKKFMEENEKLKLGLRNDNAEEHLLEAENKKLI 180 Query: 544 E--EELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKL 714 E E LK +L+ A+D L ++ D+ T+K Q +K YD LL+EH LQ++L Sbjct: 181 ESKENLKTELKKASDALLKAQN-------DVMTMKIQSERLSKEYDRLLKEHSELQNRL 232
>sp|P34562|YNP9_CAEEL Hypothetical GRIP and coiled-coil domain-containing protein T05G5.9 in chromosome III Length = 660 Score = 37.4 bits (85), Expect = 0.055 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +1 Query: 505 LKKSDVTDNKTKFEEELKDQLEIAT-DKLASSEKEINRLELDLKTLKKQYTGNNKAYDDL 681 L+KS VT + + + + Q T + LASS + RLE LK LK + T + KA+ Sbjct: 302 LEKSKVTITELEQQADQTRQEHFKTVEDLASSRDKAERLEKTLKVLKSELTESEKAHTTA 361 Query: 682 LEEHHNLQSKL 714 ++E + SKL Sbjct: 362 IDELQSSSSKL 372
>sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 35.8 bits (81), Expect = 0.16 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +1 Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687 KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++ Sbjct: 1590 KKRLLLKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645 Query: 688 EHHNLQSKLATLQ 726 + LQ+++ Q Sbjct: 1646 QLRKLQAQMKDYQ 1658
Score = 33.9 bits (76), Expect = 0.61
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLLK 1596
>sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 35.8 bits (81), Expect = 0.16 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +1 Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687 KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++ Sbjct: 1590 KKRLLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645 Query: 688 EHHNLQSKLATLQ 726 + LQ+++ Q Sbjct: 1646 QLRKLQAQMKDYQ 1658
Score = 33.9 bits (76), Expect = 0.61
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLIK 1596
>sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B) Length = 1976 Score = 35.8 bits (81), Expect = 0.16 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +1 Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687 KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++ Sbjct: 1590 KKRLLLKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645 Query: 688 EHHNLQSKLATLQ 726 + LQ+++ Q Sbjct: 1646 QLRKLQAQMKDYQ 1658
Score = 33.9 bits (76), Expect = 0.61
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLLK 1596
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,940,459
Number of Sequences: 369166
Number of extensions: 1431623
Number of successful extensions: 5599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5530
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
