Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_P21
(186 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31... 59 3e-09
sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31... 58 6e-09
sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31... 55 6e-08
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29... 45 7e-05
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29... 44 9e-05
sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29... 44 9e-05
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31) (CDM protein) (6C6-AG
tumor-associated antigen) (DXS1357E)
Length = 246
Score = 59.3 bits (142), Expect = 3e-09
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIFKSRIIKTL 184
MSLQW A+A FLY E+F+ LL IPFIS R KIFKSR+++ L
Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELL 44
>sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31 (BCR-associated protein
Bap31)
Length = 246
Score = 58.2 bits (139), Expect = 6e-09
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIFKSRIIK 178
MSLQW A+A FLY E+F+ LL IPFIS R KIFKSR+++
Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVE 42
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31)
Length = 245
Score = 54.7 bits (130), Expect = 6e-08
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIFKSRIIK 178
MSLQW +A FLY E+F LL IPFIS R K+FKSR+++
Sbjct: 1 MSLQWTTVATFLYAEVFAVLLLCIPFISPKRWQKVFKSRLVE 42
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 240
Score = 44.7 bits (104), Expect = 7e-05
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIF 160
M++QW A+A FLY E+ + LLF +PFI R KIF
Sbjct: 1 MTIQWAAVASFLYAEIGLILLFCLPFIPPQRWQKIF 36
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 44.3 bits (103), Expect = 9e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIFKSRI 172
M+LQW A+A FLY E+ + L+F +PFI R KIF +
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNV 40
>sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 44.3 bits (103), Expect = 9e-05
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 53 MSLQWVAIAGFLYLEMFIALLFAIPFISASRGSKIFKSRI 172
M+LQW A+A FLY E+ + L+F +PFI R KIF +
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNV 40
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,984,608
Number of Sequences: 369166
Number of extensions: 191231
Number of successful extensions: 374
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 68,354,980
effective HSP length: 34
effective length of database: 62,073,990
effective search space used: 1675997730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)