Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_B03
(688 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31... 138 1e-32
sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31... 138 2e-32
sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31... 137 3e-32
sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29... 108 1e-23
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29... 108 2e-23
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29... 106 7e-23
sp|P35579|MYH9_HUMAN Myosin-9 (Myosin heavy chain, nonmuscl... 40 0.008
sp|Q99105|MYSU_RABIT Myosin heavy chain, embryonic smooth m... 39 0.010
sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscl... 38 0.022
sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmus... 38 0.022
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31) (CDM protein) (6C6-AG
tumor-associated antigen) (DXS1357E)
Length = 246
Score = 138 bits (348), Expect = 1e-32
Identities = 86/230 (37%), Positives = 131/230 (56%), Gaps = 17/230 (7%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKMEYKI 181
L IPFIS RW KIFKSR+++ L +Y + DA+RE+ Y+ + K+
Sbjct: 21 LLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKV 80
Query: 182 GSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALKQA 361
+ + M+LFRAQRNLY++GFSL + F+LRR+V LI+ A L AS+ KQA
Sbjct: 81 NLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQA 140
Query: 362 QSASDAARAMLK--------------KSDVTDNKTKFEEE---LKDQLEIATDKLASSEK 490
+SAS+AA+ ++ K DV + + K EEE LK L+ D+LAS+++
Sbjct: 141 ESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQ 200
Query: 491 EINRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNETVNKKED 640
++ + E ++ ++KQ G K YD LLEEH LQ+ + + ++KKE+
Sbjct: 201 KLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAV----DGPMDKKEE 246
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31)
Length = 245
Score = 138 bits (347), Expect = 2e-32
Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 16/228 (7%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKMEYKI 181
L IPFIS RW K+FKSR+++ + Y + DA+RE++ Y+ + K+
Sbjct: 21 LLCIPFISPKRWQKVFKSRLVELVVTYGNTFFVVLIVILVLLVIDAVREILKYDDVTEKV 80
Query: 182 GSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALKQA 361
+ + M+LFRAQRNLY++G SL + F+LRR+V LI+ A L AS+ KQA
Sbjct: 81 NLQNNPGAMEHFHMKLFRAQRNLYIAGLSLLLSFLLRRLVTLISQQATLLASNEAFKKQA 140
Query: 362 QSASDAARAMLK--------------KSDVTDNKTKFEE--ELKDQLEIATDKLASSEKE 493
+SAS+AA+ ++ K D+ + + K EE LK+ L D+LAS++K+
Sbjct: 141 ESASEAAKKYMEENDQLKKGAAEDGDKLDIGNTEMKLEENKSLKNDLRKLKDELASTKKK 200
Query: 494 INRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNETVNKKE 637
+ + E + + ++KQ G K YD LLEEH LQ A+++ +V K+E
Sbjct: 201 LEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQ---ASVRGPSVKKEE 245
>sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31 (BCR-associated protein
Bap31)
Length = 246
Score = 137 bits (345), Expect = 3e-32
Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 17/229 (7%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKMEYKI 181
L IPFIS RW KIFKSR+++ + +Y + DA+RE+ Y+ + K+
Sbjct: 21 LLCIPFISPKRWQKIFKSRLVELVVSYGNTFFVVLIVILVLLVIDAVREIRKYDDVTEKV 80
Query: 182 GSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALKQA 361
+ + M+LFRAQRNLY++GFSL + F+LRR+V LI+ A L AS+ KQA
Sbjct: 81 NLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLISQQATLLASNEAFKKQA 140
Query: 362 QSASDAARAMLK--------------KSDVTDNKTKFEEE---LKDQLEIATDKLASSEK 490
+SAS+AA+ ++ K DV + + K EEE LK L+ D+LAS+++
Sbjct: 141 ESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEENRSLKADLQKLKDELASTKQ 200
Query: 491 EINRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNETVNKKE 637
++ + E ++ ++KQ G K YD LLEEH LQ A + T K+E
Sbjct: 201 KLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ---AAVDGPTDKKEE 246
>sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 108 bits (270), Expect = 1e-23
Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 15/226 (6%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKME-YK 178
+F +PFI RW KIF + + + DA+REV Y+ + +
Sbjct: 21 IFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLIVLFLDAVREVRKYSSVHTIE 80
Query: 179 IGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALK- 355
S D+ M+LFR+QRNLY+SGFSLF W VLRR+V LIT +A+ E S+ G LK
Sbjct: 81 KSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAK-ELSNKGVLKT 139
Query: 356 QAQSASDAARAMLK---------KSDVTDNKTKFEEE----LKDQLEIATDKLASSEKEI 496
QA++ + AA+ ++ KS D + E E ++DQ ++ T+ L + +
Sbjct: 140 QAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQQKLKTE-LRKTSDAL 198
Query: 497 NRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNETVNKK 634
++ + D+M +K Q +K YD LL+EH LQ +L E NKK
Sbjct: 199 SKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL-----ERGNKK 239
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 108 bits (269), Expect = 2e-23
Identities = 78/226 (34%), Positives = 117/226 (51%), Gaps = 15/226 (6%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKME-YK 178
+F +PFI RW KIF + + + DA+REV Y+ + +
Sbjct: 21 IFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLIVLFLDAVREVRKYSSVHTIE 80
Query: 179 IGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALK- 355
S D+ M+LFR+QRNLY+SGFSLF W VLRR+V LIT +A+ E S+ G LK
Sbjct: 81 KSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAK-ELSNKGVLKT 139
Query: 356 QAQSASDAARAMLK---------KSDVTDNKTKFEEE----LKDQLEIATDKLASSEKEI 496
QA++ + AA+ ++ KS D + E E ++DQ ++ T+ L + +
Sbjct: 140 QAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTE-LRKTSDAL 198
Query: 497 NRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNETVNKK 634
++ + D+M +K Q +K YD LL+EH LQ +L E NKK
Sbjct: 199 SKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL-----ERGNKK 239
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 240
Score = 106 bits (264), Expect = 7e-23
Identities = 75/220 (34%), Positives = 113/220 (51%), Gaps = 20/220 (9%)
Frame = +2
Query: 2 LFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVIGYNKMEYKI 181
LF +PFI RW KIF + + ++ DA+REV Y+
Sbjct: 21 LFCLPFIPPQRWQKIFSFSVWGKIASFWNKAFLTIIILLIILFLDAVREVRKYSSTNVVE 80
Query: 182 GSGHVHDSEAT-ILMRLFRAQRNLYVSGFSLFMWFVLRRMVVLITNVAQLEASSAGALK- 355
+ + S M+LFR+QRNLY+SGFSLF W VLRR+V LIT +A+ E ++ G LK
Sbjct: 81 KNSAIRPSAFEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQLAK-EIANKGVLKI 139
Query: 356 QAQSASDAARAMLKKSD----------------VTDNKTKFE--EELKDQLEIATDKLAS 481
QA++ + AA+ +++++ +NK E E LK +L+ A+D L
Sbjct: 140 QAENTNKAAKKFMEENEKLKLGLRNDNAEEHLLEAENKKLIESKENLKTELKKASDALLK 199
Query: 482 SEKEINRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSKL 601
++ D+MT+K Q +K YD LL+EH LQ++L
Sbjct: 200 AQN-------DVMTMKIQSERLSKEYDRLLKEHSELQNRL 232
>sp|P35579|MYH9_HUMAN Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1960
Score = 39.7 bits (91), Expect = 0.008
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 287 LRRMVVLITNVAQLEASSAGALKQAQSASDAARAMLKKSDVTDNK-TKFEEELKDQLEIA 463
L+ + V ++ A + + Q D +L +SD +K TK L+ QL+
Sbjct: 1254 LQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQSDSKSSKLTKDFSALESQLQDT 1313
Query: 464 TDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEEH----HNLQSKLATLQNETVNK 631
+ L +E NR +L L T KQ ++ + LEE HNL+ ++ATL + +
Sbjct: 1314 QELL----QEENRQKLSLSTKLKQVEDEKNSFREQLEEEEEAKHNLEKQIATLHAQVADM 1369
Query: 632 KE 637
K+
Sbjct: 1370 KK 1371
Score = 33.9 bits (76), Expect = 0.41
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 434 EELKDQLEIATDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEE 577
EE+K QLE D+L ++E RLE++L +K Q+ + + D+ EE
Sbjct: 1535 EEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEE 1582
>sp|Q99105|MYSU_RABIT Myosin heavy chain, embryonic smooth muscle isoform
Length = 501
Score = 39.3 bits (90), Expect = 0.010
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = +2
Query: 326 LEASSAGALKQAQSASDAARAMLKKSDVTDNKTKFE----------EELKDQLEIATDKL 475
LEA + Q +D M K DV N + E EE++ QLE D+L
Sbjct: 21 LEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDEL 80
Query: 476 ASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSK 598
++E RLE++ +K Q+ + +A D+ EE L +K
Sbjct: 81 QATEDAKLRLEVNTQAMKAQFERDLQARDEQSEEKKRLLTK 121
Score = 33.1 bits (74), Expect = 0.70
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 395 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLE 574
KK +T + E EL+D+ + +AS +K +E+DL L+ Q NKA + ++
Sbjct: 115 KKRLLTKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARERRVK 170
Query: 575 EHHNLQSKLATLQNE 619
+ LQ+++ Q E
Sbjct: 171 QLRRLQAQMKDYQRE 185
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle myosin heavy
chain IIa) (NMMHC II-a) (NMMHC-IIA) (Cellular myosin
heavy chain, type A) (Nonmuscle myosin heavy chain-A)
(NMMHC-A)
Length = 1960
Score = 38.1 bits (87), Expect = 0.022
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +2
Query: 287 LRRMVVLITNVAQLEASSAGALKQAQSASDAARAMLKKSDVTDNK-TKFEEELKDQLEIA 463
L+ + V + ++ A + + Q D+ +L +SD +K TK L+ QL+
Sbjct: 1254 LQELQVKFSEGERVRTELADKVTKLQVELDSVTGLLSQSDSKSSKLTKDFSALESQLQDT 1313
Query: 464 TDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEEHH----NLQSKLATLQNETVNK 631
+ L +E NR +L L T KQ ++ + LEE NL+ ++ATL + +
Sbjct: 1314 QELL----QEENRQKLSLSTKLKQMEDEKNSFREQLEEEEEAKRNLEKQIATLHAQVTDM 1369
Query: 632 KE 637
K+
Sbjct: 1370 KK 1371
Score = 33.9 bits (76), Expect = 0.41
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 434 EELKDQLEIATDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEE 577
EE+K QLE D+L ++E RLE++L +K Q+ + + D+ EE
Sbjct: 1535 EEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEE 1582
>sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 38.1 bits (87), Expect = 0.022
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Frame = +2
Query: 326 LEASSAGALKQAQSASDAARAMLKKSDVTDNKTKFE----------EELKDQLEIATDKL 475
LEA + Q +D M K DV N + E EE++ QLE D+L
Sbjct: 1496 LEAREEAERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDEL 1555
Query: 476 ASSEKEINRLELDLMTLKKQYTGNNKAYDDLLEEHHNLQSK 598
++E RLE+++ +K Q+ + + D+ EE L K
Sbjct: 1556 QATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLLIK 1596
Score = 35.4 bits (80), Expect = 0.14
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +2
Query: 395 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLMTLKKQYTGNNKAYDDLLE 574
KK + + E EL+D+ + +AS +K +E+DL L+ Q NKA D++++
Sbjct: 1590 KKRLLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645
Query: 575 EHHNLQSKLATLQNE 619
+ LQ+++ Q E
Sbjct: 1646 QLRKLQAQMKDYQRE 1660
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,805,197
Number of Sequences: 369166
Number of extensions: 1244789
Number of successful extensions: 5282
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5242
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)