Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_014_I20
(793 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31... 97 7e-20
sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31... 96 1e-19
sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31... 93 9e-19
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29... 82 2e-15
sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29... 82 2e-15
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29... 81 3e-15
sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmus... 35 0.18
sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmus... 35 0.18
sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmus... 35 0.23
sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscl... 35 0.23
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31) (CDM protein) (6C6-AG
tumor-associated antigen) (DXS1357E)
Length = 246
Score = 96.7 bits (239), Expect = 7e-20
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+F+ LL IPFIS RW KIFKSR+++ L +Y + DA+RE+
Sbjct: 12 LYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILVLLVIDAVREIR 71
Query: 182 KYNKMEYKIGSGHVHDSEATILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLIT 340
KY+ + K+ + + M+LFRAQRN+Y++GFSL + F+LRR+V LI+
Sbjct: 72 KYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLIS 124
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 462 KELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQS 623
+ LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ+
Sbjct: 182 RSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQA 235
>sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31 (BCR-associated protein
Bap31)
Length = 246
Score = 95.5 bits (236), Expect = 1e-19
Identities = 47/113 (41%), Positives = 70/113 (61%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+F+ LL IPFIS RW KIFKSR+++ + +Y + DA+RE+
Sbjct: 12 LYAEVFVVLLLCIPFISPKRWQKIFKSRLVELVVSYGNTFFVVLIVILVLLVIDAVREIR 71
Query: 182 KYNKMEYKIGSGHVHDSEATILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLIT 340
KY+ + K+ + + M+LFRAQRN+Y++GFSL + F+LRR+V LI+
Sbjct: 72 KYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLVTLIS 124
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/54 (38%), Positives = 34/54 (62%)
Frame = +3
Query: 462 KELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQS 623
+ LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ+
Sbjct: 182 RSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQA 235
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31)
Length = 245
Score = 92.8 bits (229), Expect = 9e-19
Identities = 45/113 (39%), Positives = 68/113 (60%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+F LL IPFIS RW K+FKSR+++ + Y + DA+RE++
Sbjct: 12 LYAEVFAVLLLCIPFISPKRWQKVFKSRLVELVVTYGNTFFVVLIVILVLLVIDAVREIL 71
Query: 182 KYNKMEYKIGSGHVHDSEATILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLIT 340
KY+ + K+ + + M+LFRAQRN+Y++G SL + F+LRR+V LI+
Sbjct: 72 KYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGLSLLLSFLLRRLVTLIS 124
Score = 46.6 bits (109), Expect = 8e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 462 KELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQS 623
K LK+ L+ D+LAS++K++ + E + ++KQ G K YD LLEEH LQ+
Sbjct: 181 KSLKNDLRKLKDELASTKKKLEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQA 234
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 82.0 bits (201), Expect = 2e-15
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+ + L+F +PFI RW KIF + + + DA+REV
Sbjct: 12 LYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLIVLFLDAVREVR 71
Query: 182 KYNKME-YKIGSGHVHDSEATILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLITNV 346
KY+ + + S D+ M+LFR+QRN+Y+SGFSLF W VLRR+V LIT +
Sbjct: 72 KYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQL 127
Score = 36.6 bits (83), Expect = 0.080
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 441 IIKPNLKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQ 620
+++ KK ++DQ K+ T+ L + +++ + D+ +K Q +K YD LL+EH LQ
Sbjct: 172 VLEAENKKLVEDQEKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230
Query: 621 SK 626
+
Sbjct: 231 DR 232
>sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 82.0 bits (201), Expect = 2e-15
Identities = 45/116 (38%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+ + L+F +PFI RW KIF + + + DA+REV
Sbjct: 12 LYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLIVLFLDAVREVR 71
Query: 182 KYNKME-YKIGSGHVHDSEATILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLITNV 346
KY+ + + S D+ M+LFR+QRN+Y+SGFSLF W VLRR+V LIT +
Sbjct: 72 KYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQL 127
Score = 37.0 bits (84), Expect = 0.062
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +3
Query: 441 IIKPNLKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQ 620
+++ KK ++DQ K+ T+ L + +++ + D+ +K Q +K YD LL+EH LQ
Sbjct: 172 VLEAENKKLVEDQQKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQ 230
Query: 621 SK 626
+
Sbjct: 231 DR 232
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 240
Score = 81.3 bits (199), Expect = 3e-15
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +2
Query: 2 LYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXXXXXXDAIREVI 181
LY E+ + LLF +PFI RW KIF + + ++ DA+REV
Sbjct: 12 LYAEIGLILLFCLPFIPPQRWQKIFSFSVWGKIASFWNKAFLTIIILLIILFLDAVREVR 71
Query: 182 KYNKMEYKIGSGHVHDSEAT-ILMRLFRAQRNIYVSGFSLFMWFVLRRMVVLITNV 346
KY+ + + S M+LFR+QRN+Y+SGFSLF W VLRR+V LIT +
Sbjct: 72 KYSSTNVVEKNSAIRPSAFEHTQMKLFRSQRNLYISGFSLFFWLVLRRLVTLITQL 127
Score = 35.8 bits (81), Expect = 0.14
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 459 KKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSK 626
K+ LK +LK A+D L ++ D+ T+K Q +K YD LL+EH LQ++
Sbjct: 183 KENLKTELKKASDALLKAQN-------DVMTMKIQSERLSKEYDRLLKEHSELQNR 231
>sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 35.4 bits (80), Expect = 0.18
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 438 LIIKP--NLKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHH 611
L+IK L+ EL+D+ K +AS +K +E+DLK L+ Q NKA D+++++
Sbjct: 1593 LLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIKQLR 1648
Query: 612 NLQSK 626
LQ++
Sbjct: 1649 KLQAQ 1653
>sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 35.4 bits (80), Expect = 0.18
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 438 LIIKP--NLKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHH 611
L+IK L+ EL+D+ K +AS +K +E+DLK L+ Q NKA D+++++
Sbjct: 1593 LLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIKQLR 1648
Query: 612 NLQSK 626
LQ++
Sbjct: 1649 KLQAQ 1653
>sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 35.0 bits (79), Expect = 0.23
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 456 LKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSK 626
L+ EL+D+ K +AS +K +E+DLK L+ Q NKA D+++++ LQ++
Sbjct: 1601 LEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
>sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 35.0 bits (79), Expect = 0.23
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +3
Query: 456 LKKELKDQLKIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSK 626
L+ EL+D+ K +AS +K +E+DLK L+ Q NKA D+++++ LQ++
Sbjct: 1601 LEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIKQLRKLQAQ 1653
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,951,364
Number of Sequences: 369166
Number of extensions: 1359959
Number of successful extensions: 4909
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4848
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7425705210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)