Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_B10
(786 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31... 142 1e-33
sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31... 140 3e-33
sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31... 138 1e-32
sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29... 114 3e-25
sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29... 114 4e-25
sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29... 113 7e-25
sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmus... 38 0.036
sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmus... 38 0.036
sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscl... 38 0.036
sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmus... 38 0.036
>sp|P51572|BAP31_HUMAN B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31) (CDM protein) (6C6-AG
tumor-associated antigen) (DXS1357E)
Length = 246
Score = 142 bits (357), Expect = 1e-33
Identities = 88/250 (35%), Positives = 132/250 (52%), Gaps = 17/250 (6%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
MSLQW A+A FLY E+F+ LL IPFIS RW KIFKSR+++ L +Y +
Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELLVSYGNTFFVVLIVILV 60
Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414
DA+RE+ KY+ + K+ + + M+LFRAQRNLY++GFSL + F+LRR+V
Sbjct: 61 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 120
Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEEE 552
LI+ + ++ K DV + + K EEE
Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 180
Query: 553 ---LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKLATL 723
LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ+ +
Sbjct: 181 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQAAV--- 237
Query: 724 QNETVNKKED 753
+ ++KKE+
Sbjct: 238 -DGPMDKKEE 246
>sp|Q5R8H3|BAP31_PONPY B-cell receptor-associated protein 31 (BCR-associated protein
Bap31)
Length = 246
Score = 140 bits (354), Expect = 3e-33
Identities = 88/249 (35%), Positives = 129/249 (51%), Gaps = 17/249 (6%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
MSLQW A+A FLY E+F+ LL IPFIS RW KIFKSR+++ + +Y +
Sbjct: 1 MSLQWTAVATFLYAEVFVVLLLCIPFISPKRWQKIFKSRLVELVVSYGNTFFVVLIVILV 60
Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414
DA+RE+ KY+ + K+ + + M+LFRAQRNLY++GFSL + F+LRR+V
Sbjct: 61 LLVIDAVREIRKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGFSLLLSFLLRRLV 120
Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEEE 552
LI+ + ++ K DV + + K EEE
Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAVDGGKLDVGNAEVKLEEE 180
Query: 553 ---LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKLATL 723
LK L+ D+LAS+++++ + E + ++KQ G K YD LLEEH LQ A +
Sbjct: 181 NRSLKADLQKLKDELASTKQKLEKAENQVLAMRKQSEGLTKEYDRLLEEHAKLQ---AAV 237
Query: 724 QNETVNKKE 750
T K+E
Sbjct: 238 DGPTDKKEE 246
>sp|Q61335|BAP31_MOUSE B-cell receptor-associated protein 31 (BCR-associated protein
Bap31) (p28 Bap31)
Length = 245
Score = 138 bits (348), Expect = 1e-32
Identities = 84/248 (33%), Positives = 128/248 (51%), Gaps = 16/248 (6%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
MSLQW +A FLY E+F LL IPFIS RW K+FKSR+++ + Y +
Sbjct: 1 MSLQWTTVATFLYAEVFAVLLLCIPFISPKRWQKVFKSRLVELVVTYGNTFFVVLIVILV 60
Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRMV 414
DA+RE++KY+ + K+ + + M+LFRAQRNLY++G SL + F+LRR+V
Sbjct: 61 LLVIDAVREILKYDDVTEKVNLQNNPGAMEHFHMKLFRAQRNLYIAGLSLLLSFLLRRLV 120
Query: 415 VLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK--------------KSDVTDNKTKFEE- 549
LI+ + ++ K D+ + + K EE
Sbjct: 121 TLISQQATLLASNEAFKKQAESASEAAKKYMEENDQLKKGAAEDGDKLDIGNTEMKLEEN 180
Query: 550 -ELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQ 726
LK+ L D+LAS++K++ + E + ++KQ G K YD LLEEH LQ A+++
Sbjct: 181 KSLKNDLRKLKDELASTKKKLEKAENEALAMQKQSEGLTKEYDRLLEEHAKLQ---ASVR 237
Query: 727 NETVNKKE 750
+V K+E
Sbjct: 238 GPSVKKEE 245
>sp|Q5R9U7|BAP29_PONPY B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 114 bits (285), Expect = 3e-25
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
M+LQW A+A FLY E+ + L+F +PFI RW KIF + + +
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60
Query: 235 XXXXDAIREVIKYNKME-YKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRM 411
DA+REV KY+ + + S D+ M+LFR+QRNLY+SGFSLF W VLRR+
Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120
Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK---------KSDVTDNKTKFEEE---- 552
V LIT + + ++ KS D + E E
Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180
Query: 553 LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNE 732
++DQ ++ T+ L + +++ + D+ +K Q +K YD LL+EH LQ +L E
Sbjct: 181 VEDQQKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL-----E 234
Query: 733 TVNKK 747
NKK
Sbjct: 235 RGNKK 239
>sp|Q9UHQ4|BAP29_HUMAN B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 241
Score = 114 bits (284), Expect = 4e-25
Identities = 79/245 (32%), Positives = 117/245 (47%), Gaps = 14/245 (5%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
M+LQW A+A FLY E+ + L+F +PFI RW KIF + + +
Sbjct: 1 MTLQWAAVATFLYAEIGLILIFCLPFIPPQRWQKIFSFNVWGKIATFWNKAFLTIIILLI 60
Query: 235 XXXXDAIREVIKYNKME-YKIGSGHVHDSEATILMRLFRAQRNLYVSGFSLFMWFVLRRM 411
DA+REV KY+ + + S D+ M+LFR+QRNLY+SGFSLF W VLRR+
Sbjct: 61 VLFLDAVREVRKYSSVHTIEKSSTSRPDAYEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120
Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLK---------KSDVTDNKTKFEEE---- 552
V LIT + + ++ KS D + E E
Sbjct: 121 VTLITQLAKELSNKGVLKTQAENTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKL 180
Query: 553 LKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKLATLQNE 732
++DQ ++ T+ L + +++ + D+ +K Q +K YD LL+EH LQ +L E
Sbjct: 181 VEDQEKLKTE-LRKTSDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRL-----E 234
Query: 733 TVNKK 747
NKK
Sbjct: 235 RGNKK 239
>sp|Q61334|BAP29_MOUSE B-cell receptor-associated protein 29 (BCR-associated protein
Bap29)
Length = 240
Score = 113 bits (282), Expect = 7e-25
Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Frame = +1
Query: 55 MSLQWVAIAGFLYLEMFIALLFAIPFISASRWSKIFKSRIIKTLGNYSTFYXXXXXXXXX 234
M++QW A+A FLY E+ + LLF +PFI RW KIF + + ++
Sbjct: 1 MTIQWAAVASFLYAEIGLILLFCLPFIPPQRWQKIFSFSVWGKIASFWNKAFLTIIILLI 60
Query: 235 XXXXDAIREVIKYNKMEYKIGSGHVHDSEAT-ILMRLFRAQRNLYVSGFSLFMWFVLRRM 411
DA+REV KY+ + + S M+LFR+QRNLY+SGFSLF W VLRR+
Sbjct: 61 ILFLDAVREVRKYSSTNVVEKNSAIRPSAFEHTQMKLFRSQRNLYISGFSLFFWLVLRRL 120
Query: 412 VVLITNVXXXXXXXXXXXXXXXXXXXXXRAMLKKSD----------------VTDNKTKF 543
V LIT + + +++++ +NK
Sbjct: 121 VTLITQLAKEIANKGVLKIQAENTNKAAKKFMEENEKLKLGLRNDNAEEHLLEAENKKLI 180
Query: 544 E--EELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLEEHHNLQSKL 714
E E LK +L+ A+D L ++ D+ T+K Q +K YD LL+EH LQ++L
Sbjct: 181 ESKENLKTELKKASDALLKAQN-------DVMTMKIQSERLSKEYDRLLKEHSELQNRL 232
>sp|Q61879|MYH10_MOUSE Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 37.7 bits (86), Expect = 0.036
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687
KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++
Sbjct: 1590 KKRLLLKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645
Query: 688 EHHNLQSKLATLQNE 732
+ LQ+++ Q E
Sbjct: 1646 QLRKLQAQMKDYQRE 1660
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLLK 1596
>sp|P35580|MYH10_HUMAN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 37.7 bits (86), Expect = 0.036
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687
KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++
Sbjct: 1590 KKRLLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645
Query: 688 EHHNLQSKLATLQNE 732
+ LQ+++ Q E
Sbjct: 1646 QLRKLQAQMKDYQRE 1660
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLIK 1596
>sp|Q9JLT0|MYH10_RAT Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 37.7 bits (86), Expect = 0.036
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687
KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++
Sbjct: 1590 KKRLLLKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645
Query: 688 EHHNLQSKLATLQNE 732
+ LQ+++ Q E
Sbjct: 1646 QLRKLQAQMKDYQRE 1660
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLLK 1596
>sp|Q27991|MYH10_BOVIN Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy
chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin
heavy chain, type B) (Nonmuscle myosin heavy chain-B)
(NMMHC-B)
Length = 1976
Score = 37.7 bits (86), Expect = 0.036
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 508 KKSDVTDNKTKFEEELKDQLEIATDKLASSEKEINRLELDLKTLKKQYTGNNKAYDDLLE 687
KK + + E EL+D+ + +AS +K +E+DLK L+ Q NKA D++++
Sbjct: 1590 KKRLLIKQVRELEAELEDERKQRALAVASKKK----MEIDLKDLEAQIEAANKARDEVIK 1645
Query: 688 EHHNLQSKLATLQNE 732
+ LQ+++ Q E
Sbjct: 1646 QLRKLQAQMKDYQRE 1660
Score = 33.9 bits (76), Expect = 0.52
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +1
Query: 502 MLKKSDVTDNKTKFE----------EELKDQLEIATDKLASSEKEINRLELDLKTLKKQY 651
M K DV N + E EE++ QLE D+L ++E RLE++++ +K Q+
Sbjct: 1517 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQF 1576
Query: 652 TGNNKAYDDLLEEHHNLQSK 711
+ + D+ EE L K
Sbjct: 1577 ERDLQTRDEQNEEKKRLLIK 1596
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,959,884
Number of Sequences: 369166
Number of extensions: 1332698
Number of successful extensions: 5703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5631
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)