• TOP
• EST
• Cluster

Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00191
         (588 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RAP9|AT5G2_PONPY  ATP synthase lipid-binding protein, m...    93   4e-19
sp|Q06055|AT5G2_HUMAN  ATP synthase lipid-binding protein, m...    93   6e-19
sp|P32876|AT5G1_BOVIN  ATP synthase lipid-binding protein, m...    92   7e-19
sp|Q9U505|ATP9_MANSE  ATP synthase lipid-binding protein, mi...    92   1e-18
sp|Q71S46|AT5G3_RAT  ATP synthase lipid-binding protein, mit...    91   2e-18
sp|Q5RFL2|AT5G3_PONPY  ATP synthase lipid-binding protein, m...    91   2e-18
sp|Q06056|AT5G2_SHEEP  ATP synthase lipid-binding protein, m...    91   3e-18
sp|Q06646|AT5G2_RAT  ATP synthase lipid-binding protein, mit...    91   3e-18
sp|P07926|AT5G2_BOVIN  ATP synthase lipid-binding protein, m...    91   3e-18
sp|P56383|AT5G2_MOUSE  ATP synthase lipid-binding protein, m...    91   3e-18

>sp|Q5RAP9|AT5G2_PONPY ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 52/93 (55%), Positives = 61/93 (65%)
 Frame = +2

Query: 86  LSPVVSNKDCQLHTSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPG 265
           L+ +VS+++ Q  TSA+  DID                         FGSL+IGYARNP 
Sbjct: 50  LTSLVSSRNFQ--TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPS 107

Query: 266 LKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 364
           LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 108 LKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

>sp|Q06055|AT5G2_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 52/93 (55%), Positives = 60/93 (64%)
 Frame = +2

Query: 86  LSPVVSNKDCQLHTSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPG 265
           L+ +VS++  Q  TSA+  DID                         FGSL+IGYARNP 
Sbjct: 50  LTSLVSSRSFQ--TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPS 107

Query: 266 LKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 364
           LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 108 LKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

>sp|P32876|AT5G1_BOVIN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P1) (ATPase protein 9) (ATPase
           subunit C)
          Length = 136

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 55/111 (49%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
 Frame = +2

Query: 50  VMRTFLTK-NVQKLSPVVSNKDCQL-----HTSAVKNDIDQXXXXXXXXXXXXXXXXXXX 211
           V  +FL++  +Q + P  S+   Q+      TS V  DID                    
Sbjct: 25  VSASFLSRPEIQSVQPSYSSGPLQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGA 84

Query: 212 XXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 364
                FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 85  GIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

>sp|Q9U505|ATP9_MANSE ATP synthase lipid-binding protein, mitochondrial precursor (ATPase
           protein 9) (ATPase subunit C)
          Length = 131

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 48/81 (59%), Positives = 53/81 (65%)
 Frame = +2

Query: 125 TSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGF 304
           T++V  DID                         FGSL+IGYARNP LKQQLFSYAILGF
Sbjct: 51  TTSVTKDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 110

Query: 305 ALSEAMGLFCLMMAFLILYAF 367
           ALSEAMGLFCLMMAFL+L+AF
Sbjct: 111 ALSEAMGLFCLMMAFLLLFAF 131

>sp|Q71S46|AT5G3_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
 sp|P48201|AT5G3_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
          Length = 142

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 48/83 (57%), Positives = 53/83 (63%)
 Frame = +2

Query: 116 QLHTSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAI 295
           +  TSA+  DID                         FGSL+IGYARNP LKQQLFSYAI
Sbjct: 59  EFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAI 118

Query: 296 LGFALSEAMGLFCLMMAFLILYA 364
           LGFALSEAMGLFCLM+AFLIL+A
Sbjct: 119 LGFALSEAMGLFCLMVAFLILFA 141

>sp|Q5RFL2|AT5G3_PONPY ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
          Length = 142

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 48/83 (57%), Positives = 53/83 (63%)
 Frame = +2

Query: 116 QLHTSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAI 295
           +  TSA+  DID                         FGSL+IGYARNP LKQQLFSYAI
Sbjct: 59  EFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAI 118

Query: 296 LGFALSEAMGLFCLMMAFLILYA 364
           LGFALSEAMGLFCLM+AFLIL+A
Sbjct: 119 LGFALSEAMGLFCLMVAFLILFA 141

>sp|Q06056|AT5G2_SHEEP ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 143

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 52/80 (65%)
 Frame = +2

Query: 125 TSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGF 304
           TSA+  DID                         FGSL+IGYARNP LKQQLFSYAILGF
Sbjct: 63  TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 122

Query: 305 ALSEAMGLFCLMMAFLILYA 364
           ALSEAMGLFCLM+AFLIL+A
Sbjct: 123 ALSEAMGLFCLMVAFLILFA 142

>sp|Q06646|AT5G2_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 52/80 (65%)
 Frame = +2

Query: 125 TSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGF 304
           TSA+  DID                         FGSL+IGYARNP LKQQLFSYAILGF
Sbjct: 61  TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 120

Query: 305 ALSEAMGLFCLMMAFLILYA 364
           ALSEAMGLFCLM+AFLIL+A
Sbjct: 121 ALSEAMGLFCLMVAFLILFA 140

>sp|P07926|AT5G2_BOVIN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 143

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 52/80 (65%)
 Frame = +2

Query: 125 TSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGF 304
           TSA+  DID                         FGSL+IGYARNP LKQQLFSYAILGF
Sbjct: 63  TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 122

Query: 305 ALSEAMGLFCLMMAFLILYA 364
           ALSEAMGLFCLM+AFLIL+A
Sbjct: 123 ALSEAMGLFCLMVAFLILFA 142

>sp|P56383|AT5G2_MOUSE ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 146

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 48/80 (60%), Positives = 52/80 (65%)
 Frame = +2

Query: 125 TSAVKNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGF 304
           TSA+  DID                         FGSL+IGYARNP LKQQLFSYAILGF
Sbjct: 66  TSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 125

Query: 305 ALSEAMGLFCLMMAFLILYA 364
           ALSEAMGLFCLM+AFLIL+A
Sbjct: 126 ALSEAMGLFCLMVAFLILFA 145

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,729,214
Number of Sequences: 369166
Number of extensions: 1048633
Number of successful extensions: 3203
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3202
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4406202450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_022_M19
2. Dr_sW_005_L19
3. Dr_sW_015_M04
4. Dr_sW_020_D03
5. Dr_sW_025_P24
6. Dr_sW_008_I20
7. Dr_sW_009_F18
8. Dr_sW_020_B09
9. Dr_sW_015_C06
10. Dr_sW_021_E22
11. Dr_sW_013_M13
12. Dr_sW_009_L14
13. Dr_sW_018_L03
14. Dr_sW_026_C22
15. Dr_sW_017_O19
16. Dr_sW_005_B03
17. Dr_sW_028_F02
18. Dr_sW_017_E19
19. Dr_sW_018_E18
20. Dr_sW_003_I04
21. Dr_sW_009_L22