Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_L22
(459 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9U505|ATP9_MANSE ATP synthase lipid-binding protein, mi... 91 1e-18
sp|P56384|AT5G3_MOUSE ATP synthase lipid-binding protein, m... 88 1e-17
sp|Q06056|AT5G2_SHEEP ATP synthase lipid-binding protein, m... 88 1e-17
sp|P17605|AT5G1_SHEEP ATP synthase lipid-binding protein, m... 88 1e-17
sp|Q71S46|AT5G3_RAT ATP synthase lipid-binding protein, mit... 88 1e-17
sp|Q06646|AT5G2_RAT ATP synthase lipid-binding protein, mit... 88 1e-17
sp|Q06645|AT5G1_RAT ATP synthase lipid-binding protein, mit... 88 1e-17
sp|Q06055|AT5G2_HUMAN ATP synthase lipid-binding protein, m... 88 1e-17
sp|P05496|AT5G1_HUMAN ATP synthase lipid-binding protein, m... 88 1e-17
sp|P07926|AT5G2_BOVIN ATP synthase lipid-binding protein, m... 88 1e-17
>sp|Q9U505|ATP9_MANSE ATP synthase lipid-binding protein, mitochondrial precursor (ATPase
protein 9) (ATPase subunit C)
Length = 131
Score = 90.9 bits (224), Expect = 1e-18
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 238
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+L+AF
Sbjct: 85 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 131
>sp|P56384|AT5G3_MOUSE ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P3) (ATPase protein 9) (ATPase
subunit C)
Length = 141
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|Q06056|AT5G2_SHEEP ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P2) (ATPase protein 9) (ATPase
subunit C)
Length = 143
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 97 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
>sp|P17605|AT5G1_SHEEP ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P1) (ATPase protein 9) (ATPase
subunit C)
Length = 136
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|Q71S46|AT5G3_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P3) (ATPase protein 9) (ATPase
subunit C)
sp|P48201|AT5G3_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P3) (ATPase protein 9) (ATPase
subunit C)
Length = 142
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 96 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 141
>sp|Q06646|AT5G2_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P2) (ATPase protein 9) (ATPase
subunit C)
Length = 141
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|Q06645|AT5G1_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P1) (ATPase protein 9) (ATPase
subunit C)
Length = 136
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|Q06055|AT5G2_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P2) (ATPase protein 9) (ATPase
subunit C)
Length = 141
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|P05496|AT5G1_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P1) (ATPase protein 9) (ATPase
subunit C)
Length = 136
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|P07926|AT5G2_BOVIN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
synthase proteolipid P2) (ATPase protein 9) (ATPase
subunit C)
Length = 143
Score = 87.8 bits (216), Expect = 1e-17
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +2
Query: 98 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 97 FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,572,865
Number of Sequences: 369166
Number of extensions: 813634
Number of successful extensions: 2836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2534533995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)