Planarian EST Database


Dr_sW_009_L22

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_009_L22
         (459 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9U505|ATP9_MANSE  ATP synthase lipid-binding protein, mi...    91   1e-18
sp|P56384|AT5G3_MOUSE  ATP synthase lipid-binding protein, m...    88   1e-17
sp|Q06056|AT5G2_SHEEP  ATP synthase lipid-binding protein, m...    88   1e-17
sp|P17605|AT5G1_SHEEP  ATP synthase lipid-binding protein, m...    88   1e-17
sp|Q71S46|AT5G3_RAT  ATP synthase lipid-binding protein, mit...    88   1e-17
sp|Q06646|AT5G2_RAT  ATP synthase lipid-binding protein, mit...    88   1e-17
sp|Q06645|AT5G1_RAT  ATP synthase lipid-binding protein, mit...    88   1e-17
sp|Q06055|AT5G2_HUMAN  ATP synthase lipid-binding protein, m...    88   1e-17
sp|P05496|AT5G1_HUMAN  ATP synthase lipid-binding protein, m...    88   1e-17
sp|P07926|AT5G2_BOVIN  ATP synthase lipid-binding protein, m...    88   1e-17
>sp|Q9U505|ATP9_MANSE ATP synthase lipid-binding protein, mitochondrial precursor (ATPase
           protein 9) (ATPase subunit C)
          Length = 131

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 238
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+L+AF
Sbjct: 85  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 131
>sp|P56384|AT5G3_MOUSE ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|Q06056|AT5G2_SHEEP ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 143

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 97  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
>sp|P17605|AT5G1_SHEEP ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P1) (ATPase protein 9) (ATPase
           subunit C)
          Length = 136

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|Q71S46|AT5G3_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
 sp|P48201|AT5G3_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P3) (ATPase protein 9) (ATPase
           subunit C)
          Length = 142

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 96  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 141
>sp|Q06646|AT5G2_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|Q06645|AT5G1_RAT ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P1) (ATPase protein 9) (ATPase
           subunit C)
          Length = 136

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|Q06055|AT5G2_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 141

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140
>sp|P05496|AT5G1_HUMAN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P1) (ATPase protein 9) (ATPase
           subunit C)
          Length = 136

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135
>sp|P07926|AT5G2_BOVIN ATP synthase lipid-binding protein, mitochondrial precursor (ATP
           synthase proteolipid P2) (ATPase protein 9) (ATPase
           subunit C)
          Length = 143

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +2

Query: 98  FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYA 235
           FGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLIL+A
Sbjct: 97  FGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 142
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,572,865
Number of Sequences: 369166
Number of extensions: 813634
Number of successful extensions: 2836
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2534533995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)