Planaria EST Database

DrC_00163

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00163
         (1168 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55209|NP1L1_HUMAN  Nucleosome assembly protein 1-like 1 ...   288   2e-77
sp|P28656|NP1L1_MOUSE  Nucleosome assembly protein 1-like 1 ...   288   2e-77
sp|Q9Z2G8|NP1L1_RAT  Nucleosome assembly protein 1-like 1 (N...   280   6e-75
sp|Q99733|NP1L4_HUMAN  Nucleosome assembly protein 1-like 4 ...   270   4e-72
sp|P51860|NP1L2_MOUSE  Nucleosome assembly protein 1-like 2 ...   193   9e-49
sp|Q9ULW6|NP1L2_HUMAN  Nucleosome assembly protein 1-like 2 ...   191   3e-48
sp|O59797|YCO6_SCHPO  Putative nucleosome assembly protein C...   173   1e-42
sp|P25293|NAP1_YEAST  Nucleosome assembly protein                 168   2e-41
sp|P78920|YB31_SCHPO  Putative nucleosome assembly protein C...   167   7e-41
sp|Q99457|NP1L3_HUMAN  Nucleosome assembly protein 1-like 3       115   3e-25

>sp|P55209|NP1L1_HUMAN Nucleosome assembly protein 1-like 1 (NAP-1 related protein) (hNRP)
          Length = 391

 Score =  288 bits (738), Expect = 2e-77
 Identities = 146/304 (48%), Positives = 204/304 (67%), Gaps = 2/304 (0%)
 Frame = +3

Query: 69  VLNNPEILASLQDEL-GLRMKAMKKFEQLPKNVKRRVRALRNLQLESIKIEESFFKELSV 245
           ++ NP+ILA+LQ+ L GL        E LP+ VKRRV AL+NLQ++  +IE  F++E+  
Sbjct: 42  MMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHD 101

Query: 246 LEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADELAEDVNDKAIISSGDEQIDN 425
           LE KY+ +YQ ++DKR EI+   +EPT+ ECE+  +  DE++E++ +KA I    +  + 
Sbjct: 102 LERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEISEELKEKAKIEDEKKDEEK 161

Query: 426 NDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDE-HGFVLEFYFSPN 602
            D +G+PEFWLTV +N +L+   +QEHD+PILKHL D+K    +  +   FVLEF+F PN
Sbjct: 162 EDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPN 221

Query: 603 EFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNVTVKLVKKVQKCKN 782
           E+F++E LTK Y +        PF ++GPEI+   GC I W  GKNVT+K +KK QK K 
Sbjct: 222 EYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKG 281

Query: 783 RSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEMGQYIRERIIPRAV 962
           R   RTVTK V NDSFFNFF PP     G  D+  + E++L +DFE+G ++RERIIPR+V
Sbjct: 282 RGTVRTVTKTVSNDSFFNFFAPPEVPESG--DLDDDAEAILAADFEIGHFLRERIIPRSV 339

Query: 963 LYFT 974
           LYFT
Sbjct: 340 LYFT 343

>sp|P28656|NP1L1_MOUSE Nucleosome assembly protein 1-like 1 (NAP-1 related protein) (Brain
           protein DN38)
          Length = 391

 Score =  288 bits (737), Expect = 2e-77
 Identities = 146/304 (48%), Positives = 205/304 (67%), Gaps = 2/304 (0%)
 Frame = +3

Query: 69  VLNNPEILASLQDEL-GLRMKAMKKFEQLPKNVKRRVRALRNLQLESIKIEESFFKELSV 245
           ++ NP+ILA+LQ+ L GL        E LPK VKRRV AL+NLQ++  +IE  F++E+  
Sbjct: 42  MMQNPQILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHD 101

Query: 246 LEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADELAEDVNDKAIISSGDEQIDN 425
           LE KY+ +YQ ++DKR EI+   +EPT+ ECE+  +  DE++E++ +KA I    +  + 
Sbjct: 102 LERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEK 161

Query: 426 NDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDE-HGFVLEFYFSPN 602
            D +G+PEFWLTV +N +L+   +QEHD+PILKHL D+K    +  +   FVLEF+F PN
Sbjct: 162 EDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPN 221

Query: 603 EFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNVTVKLVKKVQKCKN 782
           ++F++E LTK Y +        PF ++GPEI+   GC I W  GKNVT+K +KK QK K 
Sbjct: 222 DYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKG 281

Query: 783 RSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEMGQYIRERIIPRAV 962
           R   RTVTK V NDSFFNFF PP    +G  D+  + E++L +DFE+G ++RERIIPR+V
Sbjct: 282 RGTVRTVTKTVSNDSFFNFFAPPEVPENG--DLDDDAEAILAADFEIGHFLRERIIPRSV 339

Query: 963 LYFT 974
           LYFT
Sbjct: 340 LYFT 343

>sp|Q9Z2G8|NP1L1_RAT Nucleosome assembly protein 1-like 1 (NAP-1 related protein)
          Length = 390

 Score =  280 bits (716), Expect = 6e-75
 Identities = 144/304 (47%), Positives = 203/304 (66%), Gaps = 2/304 (0%)
 Frame = +3

Query: 69  VLNNPEILASLQDEL-GLRMKAMKKFEQLPKNVKRRVRALRNLQLESIKIEESFFKELSV 245
           ++ NP+ILA+LQ+ L GL        E LPK VKRRV AL+NLQ++  +IE  F++E+  
Sbjct: 42  MMQNPQILAALQERLDGLVDTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHD 101

Query: 246 LEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADELAEDVNDKAIISSGDEQIDN 425
           LE KY+ +YQ ++DKR EI+   +EPT+ ECE+  +  DE++E++ +KA I    +  + 
Sbjct: 102 LERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDEVSEELKEKAKIEDEKKDEEK 161

Query: 426 NDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDE-HGFVLEFYFSPN 602
            D +G+PEFWLTV +N +L+   +QEHD+PILKHL D+K    +  +   F+LEF+F PN
Sbjct: 162 EDPKGIPEFWLTVFKN-DLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFILEFHFEPN 220

Query: 603 EFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNVTVKLVKKVQKCKN 782
           E+F++E LTK Y +        PF ++GPEI+   GC I W  GKNVT+K +KK QK K 
Sbjct: 221 EYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKG 280

Query: 783 RSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEMGQYIRERIIPRAV 962
           R   RTVTK V   SFFNFF PP    +G  D+  + E++L +DFE+G ++RERIIPR+V
Sbjct: 281 RGTVRTVTKTVSKTSFFNFFAPPEVPENG--DLDDDXEAILAADFEIGHFLRERIIPRSV 338

Query: 963 LYFT 974
           LYFT
Sbjct: 339 LYFT 342

>sp|Q99733|NP1L4_HUMAN Nucleosome assembly protein 1-like 4 (Nucleosome assembly protein
           2) (NAP2)
          Length = 375

 Score =  270 bits (691), Expect = 4e-72
 Identities = 145/324 (44%), Positives = 198/324 (61%), Gaps = 5/324 (1%)
 Frame = +3

Query: 18  SRHVAHKEKNDSSVSEDVLNNPEILASLQDEL-GLRMKAMKKFEQLPKNVKRRVRALRNL 194
           S   A    N   +++ V+ NP +LA+LQ+ L  +        E LPK VKRR+ AL+ L
Sbjct: 14  SVEAAKNASNTEKLTDQVMQNPRVLAALQERLDNVPHTPSSYIETLPKAVKRRINALKQL 73

Query: 195 QLESIKIEESFFKELSVLEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADE--L 368
           Q+    IE  F++E+  LE KY+ +YQ ++DKR E +TG  EPTD E E+ SE  +E  L
Sbjct: 74  QVRCAHIEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAESEWHSENEEEEKL 133

Query: 369 AEDVNDKAIISS-GDEQIDNNDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKC 545
           A D+  K +++       +  D +G+PEFW T+  N +++   +QE+D+PILKHL D+K 
Sbjct: 134 AGDMKSKVVVTEKAAATAEEPDPKGIPEFWFTIFRNVDMLSELVQEYDEPILKHLQDIKV 193

Query: 546 VLKNEDEH-GFVLEFYFSPNEFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIH 722
              +  +   FVLEF+F PN++F++  LTK Y +        PF +EGPEIV   GC I 
Sbjct: 194 KFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTID 253

Query: 723 WLPGKNVTVKLVKKVQKCKNRSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESL 902
           W  GKNVTVK +KK QK K R   RT+TK V N+SFFNFF P   S DGE  +  + E  
Sbjct: 254 WKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFFNPLKASGDGE-SLDEDSEFT 312

Query: 903 LESDFEMGQYIRERIIPRAVLYFT 974
           L SDFE+G + RERI+PRAVLYFT
Sbjct: 313 LASDFEIGHFFRERIVPRAVLYFT 336

>sp|P51860|NP1L2_MOUSE Nucleosome assembly protein 1-like 2 (Brain-specific protein,
            X-linked)
          Length = 460

 Score =  193 bits (490), Expect = 9e-49
 Identities = 112/317 (35%), Positives = 165/317 (52%), Gaps = 40/317 (12%)
 Frame = +3

Query: 144  EQLPKNVKRRVRALRNLQLESIKIEESFFKELSVLEAKYSHIYQDVYDKRNEIVTGKHEP 323
            E LP  VK RV AL+ LQ  +  +E  F +E   +E K++ +YQ + +KR +I+   +EP
Sbjct: 102  ESLPVKVKCRVLALKKLQTRAAHLESKFLREFHDIERKFAEMYQPLLEKRRQIINAVYEP 161

Query: 324  TDGECEYDSEAADELAEDVN---------------------------------------D 386
            T+ ECEY S+  D   E+++                                       D
Sbjct: 162  TEEECEYKSDCEDYFEEEMDEEEETNGNEDGMVHEYVDEDDGYEDCYYDYDDEEEEEEED 221

Query: 387  KAIISSGDEQIDNNDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDE 566
             +  ++G E+++  D +G+P+FWLTVL+N E +   I+++D+PILK L D+K  L +  E
Sbjct: 222  DSAGATGGEEVNEEDPKGIPDFWLTVLKNVEALTPMIKKYDEPILKLLTDIKVKLSDPGE 281

Query: 567  H-GFVLEFYFSPNEFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNV 743
               F LEF+F PNE+F +E LTK Y +        P  Y G  I    GC+I W  GKNV
Sbjct: 282  PLSFTLEFHFKPNEYFKNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNV 341

Query: 744  TVKLVKKVQKCKNRSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEM 923
            T++ +KK Q+ +     RTVT+    DSFFNFF P   SL+G          +   DF +
Sbjct: 342  TLRTIKKKQRHRVWGTVRTVTEDFPKDSFFNFFSPHGISLNG---------GVENDDFLL 392

Query: 924  GQYIRERIIPRAVLYFT 974
            G  +R  IIPR+VL+F+
Sbjct: 393  GHNLRTYIIPRSVLFFS 409

>sp|Q9ULW6|NP1L2_HUMAN Nucleosome assembly protein 1-like 2 (Brain-specific protein,
            X-linked)
          Length = 460

 Score =  191 bits (485), Expect = 3e-48
 Identities = 113/317 (35%), Positives = 163/317 (51%), Gaps = 40/317 (12%)
 Frame = +3

Query: 144  EQLPKNVKRRVRALRNLQLESIKIEESFFKELSVLEAKYSHIYQDVYDKRNEIVTGKHEP 323
            E LP  VK RV AL+ LQ  +  +E  F +E   +E K++ +YQ + +KR +I+   +EP
Sbjct: 102  ESLPVKVKYRVLALKKLQTRAANLESKFLREFHDIERKFAEMYQPLLEKRRQIINAIYEP 161

Query: 324  TDGECEYDSEAAD---------------------------------------ELAEDVND 386
            T+ ECEY S++ D                                       E  E+  +
Sbjct: 162  TEEECEYKSDSEDCDDEEMCHEEMYGNEEGMVHEYVDEDDGYEDYYYDYAVEEEEEEEEE 221

Query: 387  KAIISSGDEQIDNNDVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDE 566
              I ++G+E  +  D +G+P+FWLTVL+N + +   I+++D+PILK L D+K  L +  E
Sbjct: 222  DDIEATGEENKEEEDPKGIPDFWLTVLKNVDTLTPLIKKYDEPILKLLTDIKVKLSDPGE 281

Query: 567  H-GFVLEFYFSPNEFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNV 743
               F LEF+F PNE+F +E LTK Y +        P  Y G  I  + GC I W  GKNV
Sbjct: 282  PLSFTLEFHFKPNEYFKNELLTKTYVLKSKLAYYDPHPYRGTAIEYSTGCEIDWNEGKNV 341

Query: 744  TVKLVKKVQKCKNRSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEM 923
            T+K +KK QK +     RTVT+    DSFFNFF P   + +G D            DF +
Sbjct: 342  TLKTIKKKQKHRIWGTIRTVTEDFPKDSFFNFFSPHGITSNGRDG---------NDDFLL 392

Query: 924  GQYIRERIIPRAVLYFT 974
            G  +R  IIPR+VL+F+
Sbjct: 393  GHNLRTYIIPRSVLFFS 409

>sp|O59797|YCO6_SCHPO Putative nucleosome assembly protein C364.06
          Length = 393

 Score =  173 bits (438), Expect = 1e-42
 Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 2/299 (0%)
 Frame = +3

Query: 84  EILASLQDELGLRMKAMKK-FEQLPKNVKRRVRALRNLQLESIKIEESFFKELSVLEAKY 260
           E L ++  +LG  +    +   +LP+ V+RR+  LR LQ     +E  F KEL  LE  Y
Sbjct: 48  ENLEAIDGKLGSLLHLTSEGVSELPEAVQRRISGLRGLQKRYSDLESQFQKELFELEKAY 107

Query: 261 SHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADELAEDVNDKAIISSGDEQIDNNDVRG 440
           +  Y  ++ +R+E+V G  EPT+ E +   EAAD   E+   +   S   +Q   +D +G
Sbjct: 108 AKKYAPIFKRRSEVVRGADEPTEEEIK-KGEAAD---ENEKKEPTSSESKKQEGGDDTKG 163

Query: 441 VPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDEHGFVLEFYFSPNEFFSDE 620
           +PEFWLT ++N   +   I   D+  L HL+D++  +   ++ GF LEF F+ N FF+++
Sbjct: 164 IPEFWLTAMKNVLSLSEMITPEDEGALSHLVDIR--ISYMEKPGFKLEFEFAENPFFTNK 221

Query: 621 KLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNVTVKLVKKVQKCKNRSEKRT 800
            LTK Y+    +     F Y+  E     G  + W    ++TV+ V K Q+ KN  + R 
Sbjct: 222 ILTKTYYYMEESGPSNVFLYDHAE-----GDKVDWKENADLTVRTVTKKQRNKNTKQTRV 276

Query: 801 VTKVVKNDSFFNFFEPPT-ESLDGEDDIPSEIESLLESDFEMGQYIRERIIPRAVLYFT 974
           V   V  DSFFNFF PPT  S + E+    E++ LLE D+++G+  +E++IPRAV +FT
Sbjct: 277 VKVSVPRDSFFNFFNPPTPPSEEDEESESPELDELLELDYQIGEDFKEKLIPRAVEWFT 335

>sp|P25293|NAP1_YEAST Nucleosome assembly protein
          Length = 417

 Score =  168 bits (426), Expect = 2e-41
 Identities = 102/314 (32%), Positives = 173/314 (55%), Gaps = 10/314 (3%)
 Frame = +3

Query: 63  EDVL-NNPEILASLQDELGLRMKAMKKFEQ-LPKNVKRRVRALRNLQLESIKIEESFFKE 236
           ED+L N P +L S+QD LG  +     +   LPKNVK ++ +L+ LQ E  ++E+ F  E
Sbjct: 57  EDILANQPLLLQSIQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVE 116

Query: 237 LSVLEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSEAADELAEDVNDKAIISSGDEQ 416
           +  LE K+   Y+ ++++R+ I++G+ +P   +         E+ E +N+  ++   +E+
Sbjct: 117 MFELENKFLQKYKPIWEQRSRIISGQEQPKPEQI----AKGQEIVESLNETELLVDEEEK 172

Query: 417 IDNN----DVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDEHGFVLE 584
             N+     V+G+P FWLT LEN  ++   I + D  +L++L D+      +   GF L 
Sbjct: 173 AQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRPGFKLL 232

Query: 585 FYF--SPNEFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLP-GKNVTVKL 755
           F F  S N FF+++ L K YF          F Y+  E     GC I W     NVTV L
Sbjct: 233 FRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDHAE-----GCEISWKDNAHNVTVDL 287

Query: 756 VKKVQKCKNRSEKRTVTKVVKNDSFFNFFEPP-TESLDGEDDIPSEIESLLESDFEMGQY 932
             + Q+ K   + RT+ K+   +SFFNFF+PP  ++ D ++++  ++E  L  D+ +G+ 
Sbjct: 288 EMRKQRNKTTKQVRTIEKITPIESFFNFFDPPKIQNEDQDEELEEDLEERLALDYSIGEQ 347

Query: 933 IRERIIPRAVLYFT 974
           +++++IPRAV +FT
Sbjct: 348 LKDKLIPRAVDWFT 361

>sp|P78920|YB31_SCHPO Putative nucleosome assembly protein C2D10.11C
          Length = 379

 Score =  167 bits (422), Expect = 7e-41
 Identities = 105/326 (32%), Positives = 167/326 (51%), Gaps = 8/326 (2%)
 Frame = +3

Query: 9   IKASRHVAHKEKNDSSVSEDVL----NNPEILASLQDELG-LRMKAMKKFEQLPKNVKRR 173
           ++ +R     +  D S  ++V     NNP +L+ ++  L  L  K+    E L   V+ R
Sbjct: 35  LEKARQTLQSQLEDKSAHDEVSGLLRNNPAMLSMIEGRLSSLVGKSSGYIESLAPAVQNR 94

Query: 174 VRALRNLQLESIKIEESFFKELSVLEAKYSHIYQDVYDKRNEIVTGKHEPTDGECEYDSE 353
           + AL+ LQ +   I+  F +++  LE KY   YQ ++ +R EI+ G  EP D E +++ E
Sbjct: 95  ITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDELDHEEE 154

Query: 354 AADELAEDVNDKAIISSGDEQIDNN--DVRGVPEFWLTVLENSELIRYNIQEHDKPILKH 527
                                  NN  D +G+PEFWLT L N  L+   I   D+ +L+ 
Sbjct: 155 I--------------------FQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRS 194

Query: 528 LIDMKCVLKNEDEHGFVLEFYFSPNEFFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTV 707
           L D++    + D HG+ LEF F  N++F+++ LTK Y+   +      F Y+  E     
Sbjct: 195 LSDIRFTNLSGDVHGYKLEFEFDSNDYFTNKILTKTYYYKDDLSPSGEFLYDHAE----- 249

Query: 708 GCNIHWL-PGKNVTVKLVKKVQKCKNRSEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIP 884
           G  I+W+ P KN+TV++  K Q+ +  ++ R V   V NDSFFNFF PP    D  DD  
Sbjct: 250 GDKINWIKPEKNLTVRVETKKQRNRKTNQTRLVRTTVPNDSFFNFFSPPQLDDDESDDGL 309

Query: 885 SEIESLLESDFEMGQYIRERIIPRAV 962
            +   LLE D+++G+  +++IIP A+
Sbjct: 310 DDKTELLELDYQLGEVFKDQIIPLAI 335

>sp|Q99457|NP1L3_HUMAN Nucleosome assembly protein 1-like 3
          Length = 506

 Score =  115 bits (287), Expect = 3e-25
 Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
 Frame = +3

Query: 429 DVRGVPEFWLTVLENSELIRYNIQEHDKPILKHLIDMKCVLKNEDEH-GFVLEFYFSPNE 605
           D +G+P++WL VL+N + +   IQ++D+PILK L D+        +   +  EF+F PN 
Sbjct: 307 DPKGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSDVSLKFSKPGQPVSYTFEFHFLPNP 366

Query: 606 FFSDEKLTKEYFVHVNAPTECPFEYEGPEIVRTVGCNIHWLPGKNVTVKLVKKVQKCKNR 785
           +F +E L K Y +        PF   G EI    GC I W  GK+VTV   +   +    
Sbjct: 367 YFRNEVLVKTYIIKAKPDHNDPFFSWGWEIEDCKGCKIDWRRGKDVTVTTTQ--SRTTAT 424

Query: 786 SEKRTVTKVVKNDSFFNFFEPPTESLDGEDDIPSEIESLLESDFEMGQYIRERIIPRAVL 965
            E     +VV N SFFNFF PP   + G+ + P E +++L+ DFE+GQ + + +I +++ 
Sbjct: 425 GEIEIQPRVVPNASFFNFFSPPEIPMIGKLE-pre-DAILDEDFEIGQILHDNVILKSIY 482

Query: 966 YFT 974
           Y+T
Sbjct: 483 YYT 485


 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
 Frame = +3

Query: 144 EQLPKNVKRRVRALRNLQLESIKIEESFFKELSVLEAKYSHIYQDVYDKRNEIVTGKHEP 323
           ++LP+ V+ RV+ALRN+Q E  K++  F K +  LE KY+ + + +YD+R +I+  ++EP
Sbjct: 98  DRLPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEP 157

Query: 324 TDGECEYDSE----AADELAED 377
           T+ ECE++SE    ++DE  +D
Sbjct: 158 TEEECEWNSEDEEFSSDEEVQD 179

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,783,584
Number of Sequences: 369166
Number of extensions: 2062862
Number of successful extensions: 6740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6702
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 13056979375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_00163

  1. Dr_sW_005_A10
  2. Dr_sW_024_D24
  3. Dr_sW_013_A16
  4. Dr_sW_019_D14
  5. Dr_sW_006_C24