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Planaria EST Database

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_00081
         (637 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04832|HEXP_LEIMA  DNA-binding protein HEXBP (Hexamer-bin...   165   8e-41
sp|P53849|GIS2_YEAST  Zinc-finger protein GIS2                    133   4e-31
sp|O42395|CNBP_CHICK  Cellular nucleic acid binding protein ...   124   3e-28
sp|P36627|BYR3_SCHPO  Cellular nucleic acid binding protein ...   123   5e-28
sp|P53996|CNBP_MOUSE  Cellular nucleic acid binding protein ...   121   1e-27
sp|P62634|CNBP_RAT  Cellular nucleic acid binding protein (C...   121   1e-27
sp|Q8WW36|ZCH13_HUMAN  Zinc finger CCHC domain containing pr...   107   3e-23
sp|Q966L9|GLH2_CAEEL  ATP-dependent RNA helicase glh-2 (Germ...   100   4e-21
sp|P34689|GLH1_CAEEL  ATP-dependent RNA helicase glh-1 (Germ...    87   3e-17
sp|O76743|GLH4_CAEEL  ATP-dependent RNA helicase glh-4 (Germ...    76   8e-14

>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP (Hexamer-binding protein)
          Length = 271

 Score =  165 bits (418), Expect = 8e-41
 Identities = 77/183 (42%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
 Frame = +2

Query: 44  SRKMSSRRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGD 223
           +R  ++  M C+ CG+ GHMSR+C  + K G+  +   C+ CG+ GH+SR+CP +  +G 
Sbjct: 62  ARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAA-KGFECYKCGQEGHLSRDCPSS--QGG 118

Query: 224 RRGGYER---RSDDRRGNQRSTECYNCHETGHMSRECPKQRN--QGSRNNGCYKCGENGH 388
            RGGY +   RS  + G      CY C + GH+SR+CP  +    G+ +  CYKCG+ GH
Sbjct: 119 SRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGH 178

Query: 389 MARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPN----GQSDKKCYKCNKVGHMSRDCN 556
           ++RDC    G        KCY C ++GHMSRECP+    G  D+ CYKC K GH+SR+C 
Sbjct: 179 ISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECP 238

Query: 557 E*G 565
           E G
Sbjct: 239 EAG 241

 Score =  158 bits (400), Expect = 1e-38
 Identities = 86/216 (39%), Positives = 106/216 (49%), Gaps = 36/216 (16%)
 Frame = +2

Query: 38  D*SRKMSSRRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNR 217
           D  R  +     C NCGK+GH +REC E    G  +RS  CF CGE GHMSRECP     
Sbjct: 6   DVKRPRTESSTSCRNCGKEGHYARECPEADSKGD-ERSTTCFRCGEEGHMSRECPNEARS 64

Query: 218 GD-------RRGGYERRSDD-----RRGNQRSTECYNCHETGHMSRECPKQRNQGSR--- 352
           G        R G     S D     + G  +  ECY C + GH+SR+CP  +  GSR   
Sbjct: 65  GAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQG-GSRGGY 123

Query: 353 ---------------NNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSREC 487
                          +  CYKCG+ GH++RDC    G         CY C   GH+SR+C
Sbjct: 124 GQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDC 183

Query: 488 PNGQS------DKKCYKCNKVGHMSRDCNE*GSIGT 577
           PNGQ       D+KCYKC + GHMSR+C   GS G+
Sbjct: 184 PNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGS 219

 Score =  133 bits (335), Expect = 3e-31
 Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CY CG  GH+SR+C   +   SG     C+ CG++GH+SR+CP        +GGY    D
Sbjct: 142 CYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNG------QGGYSGAGD 195

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGN---D 424
            +        CY C E+GHMSRECP   + GS +  CYKCG+ GH++R+C + GG+    
Sbjct: 196 RK--------CYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGS 247

Query: 425 RQERQIKCYNCNQNGHMSRECPN 493
           R      CY C + GH+SR+CP+
Sbjct: 248 RGGGDRTCYKCGEAGHISRDCPS 270

 Score =  131 bits (330), Expect = 1e-30
 Identities = 64/168 (38%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
 Frame = +2

Query: 116 TENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNC 295
           TE+ K    + S +C NCG+ GH +RECP+ D++GD               +RST C+ C
Sbjct: 4   TEDVKRPRTESSTSCRNCGKEGHYARECPEADSKGD---------------ERSTTCFRC 48

Query: 296 HETGHMSRECPKQRNQGSRN-NGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGH 472
            E GHMSRECP +   G+     C++CGE GHM+RDC          +  +CY C Q GH
Sbjct: 49  GEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDC-PNSAKPGAAKGFECYKCGQEGH 107

Query: 473 MSRECPNGQ---------------------SDKKCYKCNKVGHMSRDC 553
           +SR+CP+ Q                      D+ CYKC   GH+SRDC
Sbjct: 108 LSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDC 155

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = +2

Query: 311 MSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECP 490
           MS     +R +   +  C  CG+ GH AR+C  E  +   ER   C+ C + GHMSRECP
Sbjct: 1   MSETEDVKRPRTESSTSCRNCGKEGHYARECP-EADSKGDERSTTCFRCGEEGHMSRECP 59

Query: 491 N-----GQSDKKCYKCNKVGHMSRDCNE*GSIGTAK 583
           N           C++C + GHMSRDC      G AK
Sbjct: 60  NEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAK 95

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGA---CFNCGESGHMSRECPQN 208
           CY CGK GH+SREC E   S  G R G    C+ CGE+GH+SR+CP +
Sbjct: 224 CYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPSS 271

>sp|P53849|GIS2_YEAST Zinc-finger protein GIS2
          Length = 153

 Score =  133 bits (334), Expect = 4e-31
 Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNC K GH+  +CT  +     Q    C+NCGE+GH+  EC                  
Sbjct: 25  CYNCNKPGHVQTDCTMPRTVEFKQ----CYNCGETGHVRSECTVQ--------------- 65

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNN-GCYKCGENGHMARDCTQEGGNDRQ 430
                     C+NC++TGH+SRECP+ +     +   CYKCG   HMA+DC +E G    
Sbjct: 66  ---------RCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISG- 115

Query: 431 ERQIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHMSRDC 553
              +KCY C Q GHMSR+C   Q+D+ CY CN+ GH+S+DC
Sbjct: 116 ---LKCYTCGQAGHMSRDC---QNDRLCYNCNETGHISKDC 150

 Score =  107 bits (267), Expect = 3e-23
 Identities = 52/140 (37%), Positives = 71/140 (50%)
 Frame = +2

Query: 71  ECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRS 250
           +CYNCG+ GH+  ECT  +          CFNC ++GH+SRECP+               
Sbjct: 48  QCYNCGETGHVRSECTVQR----------CFNCNQTGHISRECPE--------------- 82

Query: 251 DDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQ 430
             +        CY C    HM+++C K+   G     CY CG+ GHM+RDC     NDR 
Sbjct: 83  PKKTSRFSKVSCYKCGGPNHMAKDCMKE--DGISGLKCYTCGQAGHMSRDCQ----NDR- 135

Query: 431 ERQIKCYNCNQNGHMSRECP 490
                CYNCN+ GH+S++CP
Sbjct: 136 ----LCYNCNETGHISKDCP 151

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
 Frame = +2

Query: 155 ACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNCHETGHMSRECPKQ 334
           AC+ CG+ GH++ +C                 D  R       CYNC++ GH+  +C   
Sbjct: 5   ACYVCGKIGHLAEDC-----------------DSER------LCYNCNKPGHVQTDCTMP 41

Query: 335 RNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQ----- 499
           R    +   CY CGE GH+  +CT +          +C+NCNQ GH+SRECP  +     
Sbjct: 42  RTVEFKQ--CYNCGETGHVRSECTVQ----------RCFNCNQTGHISRECPEPKKTSRF 89

Query: 500 SDKKCYKCNKVGHMSRDC 553
           S   CYKC    HM++DC
Sbjct: 90  SKVSCYKCGGPNHMAKDC 107

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 33/92 (35%), Positives = 50/92 (54%)
 Frame = +2

Query: 284 CYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQ 463
           CY C + GH++ +C  +R        CY C + GH+  DCT      R     +CYNC +
Sbjct: 6   CYVCGKIGHLAEDCDSERL-------CYNCNKPGHVQTDCTMP----RTVEFKQCYNCGE 54

Query: 464 NGHMSRECPNGQSDKKCYKCNKVGHMSRDCNE 559
            GH+  EC    + ++C+ CN+ GH+SR+C E
Sbjct: 55  TGHVRSEC----TVQRCFNCNQTGHISRECPE 82

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDN-RGDRRGGYERRS 250
           C+NC + GH+SREC E KK+    +  +C+ CG   HM+++C + D   G +     +  
Sbjct: 67  CFNCNQTGHISRECPEPKKTSRFSKV-SCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAG 125

Query: 251 DDRRGNQRSTECYNCHETGHMSRECPK 331
              R  Q    CYNC+ETGH+S++CPK
Sbjct: 126 HMSRDCQNDRLCYNCNETGHISKDCPK 152

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +2

Query: 23  PNHIF-D*SRKMSSRRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSREC 199
           PNH+  D  ++     ++CY CG+ GHMSR+C         Q    C+NC E+GH+S++C
Sbjct: 100 PNHMAKDCMKEDGISGLKCYTCGQAGHMSRDC---------QNDRLCYNCNETGHISKDC 150

Query: 200 PQ 205
           P+
Sbjct: 151 PK 152

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 437 QIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHMSRDC 553
           Q  CY C + GH++ +C    S++ CY CNK GH+  DC
Sbjct: 3   QKACYVCGKIGHLAEDC---DSERLCYNCNKPGHVQTDC 38

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 500 SDKKCYKCNKVGHMSRDCN 556
           S K CY C K+GH++ DC+
Sbjct: 2   SQKACYVCGKIGHLAEDCD 20

>sp|O42395|CNBP_CHICK Cellular nucleic acid binding protein (CNBP) (Zinc finger protein
           9)
          Length = 172

 Score =  124 bits (310), Expect = 3e-28
 Identities = 59/178 (33%), Positives = 91/178 (51%), Gaps = 17/178 (9%)
 Frame = +2

Query: 71  ECYNCGKDGHMSRECTENKKSGSGQRS--------------GACFNCGESGHMSRECPQN 208
           EC+ CG+ GH +REC      G G RS                C+ CGESGH++++C   
Sbjct: 5   ECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQ 64

Query: 209 DNR---GDRRGGYERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGE 379
           +++      RGG+  +       +R   CYNC + GH++R+C     Q      CY CGE
Sbjct: 65  EDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQ-----KCYSCGE 119

Query: 380 NGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHMSRDC 553
            GH+ +DCT          ++KCY C + GH++  C +  S+  CY+C + GH++R+C
Sbjct: 120 FGHIQKDCT----------KVKCYRCGETGHVAINC-SKTSEVNCYRCGESGHLAREC 166

 Score =  115 bits (288), Expect = 9e-26
 Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 5/142 (3%)
 Frame = +2

Query: 149 SGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTE-----CYNCHETGHM 313
           S  CF CG +GH +RECP    RG  RG    RS  R G Q  +      CY C E+GH+
Sbjct: 3   SNECFKCGRTGHWARECPTGIGRG--RG---MRSRGRAGFQFMSSSLPDICYRCGESGHL 57

Query: 314 SRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPN 493
           +++C  Q ++      CY CG  GH+A+DC +     ++ER+  CYNC + GH++R+C +
Sbjct: 58  AKDCDLQEDK-----ACYNCGRGGHIAKDCKE----PKREREQCCYNCGKPGHLARDCDH 108

Query: 494 GQSDKKCYKCNKVGHMSRDCNE 559
              ++KCY C + GH+ +DC +
Sbjct: 109 A-DEQKCYSCGEFGHIQKDCTK 129

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 42/113 (37%), Positives = 65/113 (57%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNCG+ GH++++C E K+    +R   C+NCG+ GH++R+C   D +     G      
Sbjct: 69  CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCG---EFG 121

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQE 412
             + +    +CY C ETGH++  C K     +    CY+CGE+GH+AR+CT E
Sbjct: 122 HIQKDCTKVKCYRCGETGHVAINCSK-----TSEVNCYRCGESGHLARECTIE 169

>sp|P36627|BYR3_SCHPO Cellular nucleic acid binding protein homolog
          Length = 179

 Score =  123 bits (308), Expect = 5e-28
 Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSREC--PQNDNRGDRRG--GYE 241
           CYNCG++GH +RECT         +   C+NC ++GH + EC  PQ +      G  G+ 
Sbjct: 19  CYNCGENGHQARECT---------KGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHL 69

Query: 242 RRSDDRRGNQRS-TECYNCHETGHMSRECPKQRNQ------GSRNN-GCYKCGENGHMAR 397
            R      N R   ECY C   GH++R+C     Q      G R+N  CY CG  GH AR
Sbjct: 70  VRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQAR 129

Query: 398 DCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHMSRDC 553
           DCT           +KCY+C + GH S EC      + CYKCN+ GH++ +C
Sbjct: 130 DCTMG---------VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
 Frame = +2

Query: 284 CYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQ 463
           CYNC E GH +REC K        + CY C + GH A +CT+       +++  CY C  
Sbjct: 19  CYNCGENGHQARECTK-------GSICYNCNQTGHKASECTEP------QQEKTCYACGT 65

Query: 464 NGHMSRECP---NGQSDKKCYKCNKVGHMSRDCNE*G 565
            GH+ R+CP   N +   +CYKC +VGH++RDC   G
Sbjct: 66  AGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNG 102

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 35/76 (46%), Positives = 41/76 (53%)
 Frame = +2

Query: 326 PKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSD 505
           P+    G R   CY CGENGH AR+CT+            CYNCNQ GH + EC   Q +
Sbjct: 10  PQTTRPGPR---CYNCGENGHQARECTKGS---------ICYNCNQTGHKASECTEPQQE 57

Query: 506 KKCYKCNKVGHMSRDC 553
           K CY C   GH+ RDC
Sbjct: 58  KTCYACGTAGHLVRDC 73

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 38/117 (32%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
 Frame = +2

Query: 71  ECYNCGKDGHMSRECTENKKSGSGQRSG-----ACFNCGESGHMSRECPQNDNRGDRRGG 235
           ECY CG+ GH++R+C  N +   G+  G      C+ CG  GH +R+C            
Sbjct: 84  ECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTM---------- 133

Query: 236 YERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCT 406
                          +CY+C + GH S EC     Q S    CYKC + GH+A +CT
Sbjct: 134 -------------GVKCYSCGKIGHRSFEC----QQASDGQLCYKCNQPGHIAVNCT 173

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 38/86 (44%)
 Frame = +2

Query: 68  MECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERR 247
           M CY CG  GH +R+CT   K         C++CG+ GH S EC Q              
Sbjct: 116 MNCYACGSYGHQARDCTMGVK---------CYSCGKIGHRSFECQQ-------------A 153

Query: 248 SDDRRGNQRSTECYNCHETGHMSREC 325
           SD +        CY C++ GH++  C
Sbjct: 154 SDGQL-------CYKCNQPGHIAVNC 172

>sp|P53996|CNBP_MOUSE Cellular nucleic acid binding protein (CNBP) (Zinc finger protein
           9)
          Length = 178

 Score =  121 bits (304), Expect = 1e-27
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
 Frame = +2

Query: 71  ECYNCGKDGHMSRECTENKKSGSGQRS--------------------GACFNCGESGHMS 190
           EC+ CG+ GH +REC      G G RS                      C+ CGESGH++
Sbjct: 5   ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64

Query: 191 RECPQNDNR---GDRRGGYERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNG 361
           ++C   ++       RGG+  +       +R   CYNC + GH++R+C     Q      
Sbjct: 65  KDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQ-----K 119

Query: 362 CYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHM 541
           CY CGE GH+ +DCT          ++KCY C + GH++  C +  S+  CY+C + GH+
Sbjct: 120 CYSCGEFGHIQKDCT----------KVKCYRCGETGHVAINC-SKTSEVNCYRCGESGHL 168

Query: 542 SRDC 553
           +R+C
Sbjct: 169 AREC 172

 Score =  115 bits (289), Expect = 7e-26
 Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
 Frame = +2

Query: 149 SGACFNCGESGHMSRECPQNDNRG-----DRRGGYERRSDDRRGNQRSTE----CYNCHE 301
           S  CF CG SGH +RECP    RG       RGG+   + DR     S+     CY C E
Sbjct: 3   SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGF---TSDRGFQFVSSSLPDICYRCGE 59

Query: 302 TGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSR 481
           +GH++++C  Q ++      CY CG  GH+A+DC +     ++ER+  CYNC + GH++R
Sbjct: 60  SGHLAKDCDLQEDE-----ACYNCGRGGHIAKDCKE----PKREREQCCYNCGKPGHLAR 110

Query: 482 ECPNGQSDKKCYKCNKVGHMSRDCNE 559
           +C +   ++KCY C + GH+ +DC +
Sbjct: 111 DCDHA-DEQKCYSCGEFGHIQKDCTK 135

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 42/113 (37%), Positives = 65/113 (57%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNCG+ GH++++C E K+    +R   C+NCG+ GH++R+C   D +     G      
Sbjct: 75  CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCG---EFG 127

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQE 412
             + +    +CY C ETGH++  C K     +    CY+CGE+GH+AR+CT E
Sbjct: 128 HIQKDCTKVKCYRCGETGHVAINCSK-----TSEVNCYRCGESGHLARECTIE 175

>sp|P62634|CNBP_RAT Cellular nucleic acid binding protein (CNBP) (Zinc finger protein
           9)
 sp|P62633|CNBP_HUMAN Cellular nucleic acid binding protein (CNBP) (Zinc finger protein
           9)
          Length = 177

 Score =  121 bits (304), Expect = 1e-27
 Identities = 59/183 (32%), Positives = 90/183 (49%), Gaps = 22/183 (12%)
 Frame = +2

Query: 71  ECYNCGKDGHMSRECTENKKSGSGQRS--------------------GACFNCGESGHMS 190
           EC+ CG+ GH +REC      G G RS                      C+ CGESGH++
Sbjct: 5   ECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLA 64

Query: 191 RECPQNDNR--GDRRGGYERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGC 364
           ++C   ++      RGG+  +       +R   CYNC + GH++R+C     Q      C
Sbjct: 65  KDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQ-----KC 119

Query: 365 YKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKKCYKCNKVGHMS 544
           Y CGE GH+ +DCT          ++KCY C + GH++  C +  S+  CY+C + GH++
Sbjct: 120 YSCGEFGHIQKDCT----------KVKCYRCGETGHVAINC-SKTSEVNCYRCGESGHLA 168

Query: 545 RDC 553
           R+C
Sbjct: 169 REC 171

 Score =  114 bits (286), Expect = 2e-25
 Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 9/146 (6%)
 Frame = +2

Query: 149 SGACFNCGESGHMSRECPQNDNRG-----DRRGGYERRSDDRRGNQRSTE----CYNCHE 301
           S  CF CG SGH +RECP    RG       RGG+   + DR     S+     CY C E
Sbjct: 3   SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGF---TSDRGFQFVSSSLPDICYRCGE 59

Query: 302 TGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSR 481
           +GH++++C  Q       + CY CG  GH+A+DC +     ++ER+  CYNC + GH++R
Sbjct: 60  SGHLAKDCDLQ------EDACYNCGRGGHIAKDCKE----PKREREQCCYNCGKPGHLAR 109

Query: 482 ECPNGQSDKKCYKCNKVGHMSRDCNE 559
           +C +   ++KCY C + GH+ +DC +
Sbjct: 110 DCDHA-DEQKCYSCGEFGHIQKDCTK 134

 Score = 92.8 bits (229), Expect = 7e-19
 Identities = 42/113 (37%), Positives = 65/113 (57%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNCG+ GH++++C E K+    +R   C+NCG+ GH++R+C   D +     G      
Sbjct: 74  CYNCGRGGHIAKDCKEPKR----EREQCCYNCGKPGHLARDCDHADEQKCYSCG---EFG 126

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQE 412
             + +    +CY C ETGH++  C K     +    CY+CGE+GH+AR+CT E
Sbjct: 127 HIQKDCTKVKCYRCGETGHVAINCSK-----TSEVNCYRCGESGHLARECTIE 174

>sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain containing protein 13
          Length = 166

 Score =  107 bits (266), Expect = 3e-23
 Identities = 51/131 (38%), Positives = 73/131 (55%)
 Frame = +2

Query: 161 FNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNCHETGHMSRECPKQRN 340
           F CG SGH +R CP+    G RRGG   R         S  CY C E+G  ++ C     
Sbjct: 7   FACGHSGHWARGCPRG-GAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCV---- 61

Query: 341 QGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKKCYK 520
                N CY CG +GH+A+DC     + ++ER+  CY C + GH++R+C + Q ++KCY 
Sbjct: 62  --LLGNICYNCGRSGHIAKDCK----DPKRERRQHCYTCGRLGHLARDC-DRQKEQKCYS 114

Query: 521 CNKVGHMSRDC 553
           C K+GH+ +DC
Sbjct: 115 CGKLGHIQKDC 125

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 42/138 (30%), Positives = 64/138 (46%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CY CG+ G  ++ C              C+NCG SGH++++C                 D
Sbjct: 47  CYCCGESGRNAKNCV--------LLGNICYNCGRSGHIAKDC----------------KD 82

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQE 433
            +R  +R   CY C   GH++R+C +Q+ Q      CY CG+ GH+ +DC Q        
Sbjct: 83  PKR--ERRQHCYTCGRLGHLARDCDRQKEQK-----CYSCGKLGHIQKDCAQ-------- 127

Query: 434 RQIKCYNCNQNGHMSREC 487
             +KCY C + GH++  C
Sbjct: 128 --VKCYRCGEIGHVAINC 143

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 33/112 (29%), Positives = 60/112 (53%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNCG+ GH++++C + K+    +R   C+ CG  GH++R+C +                
Sbjct: 67  CYNCGRSGHIAKDCKDPKR----ERRQHCYTCGRLGHLARDCDR---------------- 106

Query: 254 DRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQ 409
                Q+  +CY+C + GH+ ++C + +        CY+CGE GH+A +C++
Sbjct: 107 -----QKEQKCYSCGKLGHIQKDCAQVK--------CYRCGEIGHVAINCSK 145

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 27/92 (29%), Positives = 41/92 (44%)
 Frame = +2

Query: 62  RRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYE 241
           RR  CY CG+ GH++R+C   K+         C++CG+ GH+ ++C Q            
Sbjct: 87  RRQHCYTCGRLGHLARDCDRQKEQ-------KCYSCGKLGHIQKDCAQ------------ 127

Query: 242 RRSDDRRGNQRSTECYNCHETGHMSRECPKQR 337
                        +CY C E GH++  C K R
Sbjct: 128 ------------VKCYRCGEIGHVAINCSKAR 147

>sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 (Germline helicase 2)
          Length = 974

 Score =  100 bits (248), Expect = 4e-21
 Identities = 57/172 (33%), Positives = 77/172 (44%), Gaps = 6/172 (3%)
 Frame = +2

Query: 62  RRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYE 241
           R   C+NC + GH S +C E KK    +    C+NC + GH SR+CP+     + R G+ 
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKE---REPRVCYNCQQPGHNSRDCPEERKpreGRNGFT 311

Query: 242 RRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDC---TQE 412
             S    G       ++   T             GS NNG    G  G         +  
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGF----------GSGNNGESGFGSGGFGGNSNGFGSGG 361

Query: 413 GGNDRQERQIKCYNCNQNGHMSRECPNGQSDKK---CYKCNKVGHMSRDCNE 559
           GG DR ER   C+NC Q GH S +CP  + +++   CY C + GH SRDC E
Sbjct: 362 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
 Frame = +2

Query: 140 GQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNCHETGHMSR 319
           G+R+  CFNC + GH S +CP+     + R                  CYNC + GH SR
Sbjct: 367 GERNNNCFNCQQPGHRSNDCPEPKKEREPR-----------------VCYNCQQPGHNSR 409

Query: 320 ECPKQRNQGSRNNGC---YKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECP 490
           +CP++R      NG    +  G +G       +  GN+ +   +KC+NC   GH S ECP
Sbjct: 410 DCPEERKpreGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECP 469

Query: 491 NGQSDKKCYKCNKVGHMSRDC 553
             +  + C+ C + GH S +C
Sbjct: 470 --EPPRGCFNCGEQGHRSNEC 488

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
 Frame = +2

Query: 134 GSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNCHETGHM 313
           GSG+  G  F  G++G        N N G   G          G        N HE+G  
Sbjct: 169 GSGKAGGTGFGSGKAGGTG--FGGNSNSGSGFGS---------GLTNGFGSGNNHESGFG 217

Query: 314 SRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGHMSRECPN 493
                K    G  N+G    G  G+     +  GG DR ER   C+NC Q GH S +CP 
Sbjct: 218 GG---KSGGFGGGNSGGSGFGSGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 274

Query: 494 GQSDKK---CYKCNKVGHMSRDCNE 559
            + +++   CY C + GH SRDC E
Sbjct: 275 PKKEREPRVCYNCQQPGHNSRDCPE 299

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSD 253
           CYNC + GH SR+C E +K   G R+G     G               G   GG+   + 
Sbjct: 398 CYNCQQPGHNSRDCPEERKpreG-RNGFTSGFG---------------GGNDGGFGGGNA 441

Query: 254 DRRGNQRS---TECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDC 403
           +  GN       +C+NC   GH S ECP+         GC+ CGE GH + +C
Sbjct: 442 EGFGNNEERGPMKCFNCKGEGHRSAECPEP------PRGCFNCGEQGHRSNEC 488

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/45 (48%), Positives = 26/45 (57%)
 Frame = +2

Query: 68  MECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECP 202
           M+C+NC  +GH S EC E  +         CFNCGE GH S ECP
Sbjct: 453 MKCFNCKGEGHRSAECPEPPRG--------CFNCGEQGHRSNECP 489

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSG 142
           C+NCG+ GH S EC    K   G
Sbjct: 475 CFNCGEQGHRSNECPNPAKpreG 497

>sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 (Germline helicase 1)
          Length = 763

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 47/147 (31%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
 Frame = +2

Query: 134 GSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRGNQRSTECYNCHETGHM 313
           G G+R+  CFNC + GH S +CP+                  R  +    CYNC + GH 
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEP-----------------RKEREPRVCYNCQQPGHT 194

Query: 314 SRECPKQRNQGSRNNGCY-------KCGENGHMARDCTQEGGNDRQERQIKCYNCNQNGH 472
           SREC ++R       G +         G N     D    GG +R    +KC+NC   GH
Sbjct: 195 SRECTEERKpreGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEER--GPMKCFNCKGEGH 252

Query: 473 MSRECPNGQSDKKCYKCNKVGHMSRDC 553
            S ECP  +  + C+ C + GH S +C
Sbjct: 253 RSAECP--EPPRGCFNCGEQGHRSNEC 277

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
 Frame = +2

Query: 62  RRMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDN-RGDRRGGY 238
           R   C+NC + GH S +C E +K    +    C+NC + GH SREC +    R  R GG+
Sbjct: 156 RNNNCFNCQQPGHRSSDCPEPRKE---REPRVCYNCQQPGHTSRECTEERKpreGRTGGF 212

Query: 239 -------ERRSDDRRG---------NQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYK 370
                      +D  G          +   +C+NC   GH S ECP+         GC+ 
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEP------PRGCFN 266

Query: 371 CGENGHMARDC 403
           CGE GH + +C
Sbjct: 267 CGEQGHRSNEC 277

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 38/110 (34%)
 Frame = +2

Query: 344 GSRNNGCYKCGENGHMARDCTQEGGNDRQERQIK-CYNCNQNGHMSRECP---------- 490
           G RNN C+ C + GH + DC +     R+ER+ + CYNC Q GH SREC           
Sbjct: 154 GERNNNCFNCQQPGHRSSDCPEP----RKEREPRVCYNCQQPGHTSRECTEERKpreGRT 209

Query: 491 -----------NGQSD----------------KKCYKCNKVGHMSRDCNE 559
                      NG +D                 KC+ C   GH S +C E
Sbjct: 210 GGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +2

Query: 410 EGGNDRQERQIKCYNCNQNGHMSRECPNGQSDKK---CYKCNKVGHMSRDCNE 559
           EGG+   ER   C+NC Q GH S +CP  + +++   CY C + GH SR+C E
Sbjct: 148 EGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 22/45 (48%), Positives = 26/45 (57%)
 Frame = +2

Query: 68  MECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECP 202
           M+C+NC  +GH S EC E  +         CFNCGE GH S ECP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPRG--------CFNCGEQGHRSNECP 278

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSG 142
           C+NCG+ GH S EC    K   G
Sbjct: 264 CFNCGEQGHRSNECPNPAKpreG 286

>sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 (Germline helicase 4)
          Length = 1156

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
 Frame = +2

Query: 92  DGHMSRECTENKKSG--SGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYERRSDDRRG 265
           +G+   E ++N++     G+R   C NCGE GH+S+EC                    + 
Sbjct: 548 NGNTFGEPSDNQRGNWDGGERPRGCHNCGEEGHISKECD-------------------KP 588

Query: 266 NQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEGGNDRQERQIK 445
                 C NC + GH + +C + R        C  CG  GH A DC Q      +  +  
Sbjct: 589 KVPRFPCRNCEQLGHFASDCDQPR---VPRGPCRNCGIEGHFAVDCDQP-----KVPRGP 640

Query: 446 CYNCNQNGHMSRECPNG----QSDKKCYKCNKVGHMSRDC 553
           C NC Q GH +++C N     +  + C +C + GH   +C
Sbjct: 641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
 Frame = +2

Query: 74  CYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQ-NDNRGDRRG----GY 238
           C+NCG++GH+S+EC + K          C NC + GH + +C Q    RG  R     G+
Sbjct: 572 CHNCGEEGHISKECDKPKVPRF-----PCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGH 626

Query: 239 ERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDC 403
                D+    R   C NC + GH +++C  +R +      C +C E GH   +C
Sbjct: 627 FAVDCDQPKVPRGP-CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
 Frame = +2

Query: 95  GHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRR-------------GG 235
           G  S+      K+G G  S   F   +SG      PQ+   GD               GG
Sbjct: 473 GQQSKGFGGATKNGFGGDSSNSFGKRDSGFGG---PQDQGFGDTDAPSKSGLGSFNTGGG 529

Query: 236 YERRSDDRRGNQRSTECYNCHETGHMSRECPKQRNQGSRNNGCYKCGENGHMARDCTQEG 415
             + +    G   S+   N +  G  S       + G R  GC+ CGE GH++++C +  
Sbjct: 530 AVKSAFGAAGFGSSSNFGNGNTFGEPSDNQRGNWDGGERPRGCHNCGEEGHISKECDKP- 588

Query: 416 GNDRQERQIKCYNCNQNGHMSRECPNGQSDK-KCYKCNKVGHMSRDCNE 559
               +  +  C NC Q GH + +C   +  +  C  C   GH + DC++
Sbjct: 589 ----KVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ 633

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 26/88 (29%), Positives = 38/88 (43%)
 Frame = +2

Query: 65  RMECYNCGKDGHMSRECTENKKSGSGQRSGACFNCGESGHMSRECPQNDNRGDRRGGYER 244
           R  C NCG +GH + +C + K        G C NCG+ GH +++C               
Sbjct: 615 RGPCRNCGIEGHFAVDCDQPKVP-----RGPCRNCGQEGHFAKDC--------------- 654

Query: 245 RSDDRRGNQRSTECYNCHETGHMSRECP 328
             ++R   + +  C  C E GH   ECP
Sbjct: 655 -QNERVRMEPTEPCRRCAEEGHWGYECP 681

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,252,898
Number of Sequences: 369166
Number of extensions: 1658829
Number of successful extensions: 10694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8166
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5121172350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

1. Dr_sW_003_B12
2. Dr_sW_013_M20
3. Dr_sW_027_B14
4. Dr_sW_007_J06
5. Dr_sW_021_J11