Planaria EST Database

DrC_01147

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01147
         (1244 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O88487|DYI2_MOUSE  Dynein intermediate chain 2, cytosolic...   473   e-133
sp|Q13409|DYI2_HUMAN  Dynein intermediate chain 2, cytosolic...   471   e-132
sp|Q62871|DYI2_RAT  Dynein intermediate chain 2, cytosolic (...   470   e-132
sp|O14576|DYI1_HUMAN  Dynein intermediate chain 1, cytosolic...   462   e-130
sp|Q63100|DYI1_RAT  Dynein intermediate chain 1, cytosolic (...   461   e-129
sp|O88485|DYI1_MOUSE  Dynein intermediate chain 1, cytosolic...   453   e-127
sp|Q24246|DYIN_DROME  Dynein intermediate chain, cytosolic (...   439   e-123
sp|P54703|DYIN_DICDI  Dynein intermediate chain, cytosolic (...   313   7e-85
sp|Q9GZS0|DYI4_HUMAN  Dynein intermediate chain 2, axonemal ...   113   1e-24
sp|P27766|DYI3_CHLRE  Dynein, 70 kDa intermediate chain, fla...   111   5e-24

>sp|O88487|DYI2_MOUSE Dynein intermediate chain 2, cytosolic (DH IC-2) (Cytoplasmic dynein
            intermediate chain 2)
          Length = 612

 Score =  473 bits (1216), Expect = e-133
 Identities = 217/357 (60%), Positives = 270/357 (75%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVV+CLDWS  YPELL+ +Y+ NEEAPHEPDGV L+WN+KYKK +PEYV HCQS +
Sbjct: 250  WSKHRVVSCLDWSSQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAV 309

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +SA    +HP+L+VGGTYSGQIVLWD R+NKRTP+QRTPL+A +HTHPV  + V+GTQNA
Sbjct: 310  MSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNA 369

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HNLIS+S+DGK+C+WSL+ML+ P ++ E   KQ+K++AVT M F   DVNNF+VGSE+G 
Sbjct: 370  HNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGS 429

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+SE FEGH GPI+G+  H   GAVDFSHLF+TSSFDWTVKLW+ ++  
Sbjct: 430  VYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKN-- 487

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYVYDV WSP HPA+FA VDG G LD+W L  DTEVP +   V    AL
Sbjct: 488  NKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPAL 547

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKE 1079
            N+  W  +G  +AVGD  G+I I DV EQ+  P +  W+    TL E+    AD +E
Sbjct: 548  NRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEE 604

>sp|Q13409|DYI2_HUMAN Dynein intermediate chain 2, cytosolic (DH IC-2) (Cytoplasmic dynein
            intermediate chain 2)
          Length = 638

 Score =  471 bits (1213), Expect = e-132
 Identities = 216/357 (60%), Positives = 270/357 (75%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVV+CLDWS  YPELL+ +Y+ NE+APHEPDGV L+WN+KYKK +PEYV HCQS +
Sbjct: 276  WSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAV 335

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +SA    +HP+L+VGGTYSGQIVLWD R+NKRTP+QRTPL+A +HTHPV  + V+GTQNA
Sbjct: 336  MSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNA 395

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HNLIS+S+DGK+C+WSL+ML+ P ++ E   KQ+K++AVT M F   DVNNF+VGSE+G 
Sbjct: 396  HNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGS 455

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+SE FEGH GPI+G+  H   GAVDFSHLF+TSSFDWTVKLW+ ++  
Sbjct: 456  VYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKN-- 513

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYVYDV WSP HPA+FA VDG G LD+W L  DTEVP +   V    AL
Sbjct: 514  NKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPAL 573

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKE 1079
            N+  W  +G  +AVGD  G+I I DV EQ+  P +  W+    TL E+    AD +E
Sbjct: 574  NRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEE 630

>sp|Q62871|DYI2_RAT Dynein intermediate chain 2, cytosolic (DH IC-2) (Cytoplasmic dynein
            intermediate chain 2)
          Length = 638

 Score =  470 bits (1209), Expect = e-132
 Identities = 217/357 (60%), Positives = 270/357 (75%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVV+CLDWS  YPELL+ +Y+ NEEAPHEPDGV L+WN+KYKK +PEYV HCQS +
Sbjct: 276  WSKHRVVSCLDWSSQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAV 335

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +SA    +HP+L+VGGTYSGQIVLWD R+NKRTP+QRTPL+A +HTHPV  + V+GTQNA
Sbjct: 336  MSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNA 395

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HNLIS+S+DGK+C+WSL+ML+ P ++ E   KQ+K++AVT M F   DVNNF+VGSE+G 
Sbjct: 396  HNLISISTDGKICSWSLDMLSHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGS 455

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+SE FEGH GPI+G+  H   GAVDFSHLF+TSSFDWTVKLWS ++  
Sbjct: 456  VYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWSTKN-- 513

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYVYDV  SP HPA+FA VDG G LD+W L  DTEVP +   V    AL
Sbjct: 514  NKPLYSFEDNSDYVYDVIGSPTHPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPAL 573

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKE 1079
            N+  W  +G  +AVGD  G+I I DV EQ+  P +  W+    TL E+  + AD +E
Sbjct: 574  NRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAEINASRADAEE 630

>sp|O14576|DYI1_HUMAN Dynein intermediate chain 1, cytosolic (DH IC-1) (Cytoplasmic dynein
            intermediate chain 1)
          Length = 645

 Score =  462 bits (1190), Expect = e-130
 Identities = 210/359 (58%), Positives = 271/359 (75%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVVTC+DWS  YPEL++ +Y+ NE+APHEPDGV L+WN+K+KK +PEYV HCQS +
Sbjct: 284  WSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSV 343

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +S C   +HP+L+VGGTYSGQIVLWD R+++RTP+QRTPL+A +HTHPV  + V+GTQNA
Sbjct: 344  MSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNA 403

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HNLI+VS+DGKMC+WSL+ML+ P E+ E    ++K +AVT M F + DVNNF+VGSE+G 
Sbjct: 404  HNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGT 463

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+ E FEGH GP++G++ H   G +DFSHLF+TSSFDWTVKLW+ +   
Sbjct: 464  VYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKH-- 521

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYVYDV WSPVHPA+FA VDG G LD+W L  DTEVP +   +   +AL
Sbjct: 522  NKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEVPTASVAIEGASAL 581

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKELG 1085
            N+  W + G  VAVGD  GRI + DV E L  P +  W+  + TL E++   AD +E G
Sbjct: 582  NRVRWAQAGKEVAVGDSEGRIWVYDVGE-LAVPHNDEWTRFARTLVEIRANRADSEEEG 639

>sp|Q63100|DYI1_RAT Dynein intermediate chain 1, cytosolic (DH IC-1) (Cytoplasmic dynein
            intermediate chain 1)
          Length = 643

 Score =  461 bits (1187), Expect = e-129
 Identities = 211/359 (58%), Positives = 270/359 (75%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVVTC+DWS  YPEL++ +Y  NE+APHEPDGV L+WN+K+KK +PEYV HCQS +
Sbjct: 282  WSKHRVVTCMDWSLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSV 341

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +S C   +HP+L+VGGTYSGQIVLWD R+++RTP+QRTPL+A +HTHPV  + V+GTQNA
Sbjct: 342  MSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTQNA 401

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HNLI+VS+DGKMC+WSL+ML+ P E+ E    ++K +AVT M F + DVNNF+VGSE+G 
Sbjct: 402  HNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGT 461

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+ E FEGH GP++G++ H   G +DFSHLF+TSSFDWTVKLW+ +   
Sbjct: 462  VYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKH-- 519

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYVYDV WSPVHPA+FA VDG G LD+W L +DTEVP +   +    AL
Sbjct: 520  NKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGAYAL 579

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKELG 1085
            N+  W + G  VAVGD  GRI I DV E L  P +  W+  + TL E++   AD +E G
Sbjct: 580  NRVRWAQGGKEVAVGDSEGRIWIYDVGE-LAVPHNDEWTRFARTLVEIRANRADSEEEG 637

>sp|O88485|DYI1_MOUSE Dynein intermediate chain 1, cytosolic (DH IC-1) (Cytoplasmic dynein
            intermediate chain 1)
          Length = 628

 Score =  453 bits (1166), Expect = e-127
 Identities = 207/359 (57%), Positives = 268/359 (74%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHRVVTC+DWS  YPEL++ +Y  NE+APHEPDGV L+WN+K+KK +PEYV HCQS +
Sbjct: 267  WSKHRVVTCMDWSLQYPELMVASYSNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSV 326

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +S C   +HP+L+VGGTYSGQIVLWD R+++RTP+QRTPL+A +HTHPV  + V+GT NA
Sbjct: 327  MSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHPVYCVNVVGTHNA 386

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
             NLI+VS+DGKMC+WSL+ML+ P E+ E    ++K +AVT M F + DVNNF+VGSE+G 
Sbjct: 387  RNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGT 446

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG KAG+ E FEGH GP++G++ H   G +DFSHLF+TSSFDWTVKLW+ +   
Sbjct: 447  VYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKH-- 504

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++P++S EDN DYVYDV WSPVHPA+FA VDG G LD+W L +DTEVP +   +   +AL
Sbjct: 505  NKPVYSSEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNSDTEVPTASVAIEGASAL 564

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASADIKELG 1085
            N+  W + G  VAVGD  GRI I DV E L  P +  W+  + TL E++   AD +E G
Sbjct: 565  NRVRWAQGGKEVAVGDSEGRIWIYDVGE-LAVPHNDEWTRFARTLVEIRANRADSEEEG 622

>sp|Q24246|DYIN_DROME Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic dynein
            intermediate chain) (Short wing protein)
          Length = 663

 Score =  439 bits (1129), Expect = e-123
 Identities = 198/354 (55%), Positives = 270/354 (76%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W K+R +T +DWS  +PEL++G+YH NEE+P+EPDGV ++WN K+KK +PE V HCQS +
Sbjct: 310  WSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAV 369

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            +S C   ++P+LI+GGTYSGQIVLWD R  KRTPIQRTPL+A +HTHPV  L ++GTQNA
Sbjct: 370  MSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNA 429

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAKSIAVTCMDFLSNDVNNFLVGSEDGM 548
            HN+IS+SSDGK+C+WSL+ML+ P +T E   +Q+K+IA+T M F +N++N+ ++GSEDG 
Sbjct: 430  HNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGY 489

Query: 549  VYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSG 728
            VY   RHG ++G++E +E HLGPI+G+S+H    + DF HLFLTSS DWT+KLWS +D  
Sbjct: 490  VYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKD-- 547

Query: 729  SRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNPMTAL 908
            ++PL+SFEDN DYV DVAWSPVHPA+FA+VDG G LD+W L  DTEVP +   V    AL
Sbjct: 548  TKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPAL 607

Query: 909  NKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSHTLTELQLASAD 1070
            N+ SW  +G HV +GD++G++ + DV E L QPS   WS  +  L+E+++  +D
Sbjct: 608  NRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQSD 661

>sp|P54703|DYIN_DICDI Dynein intermediate chain, cytosolic (DH IC) (Cytoplasmic dynein
            intermediate chain)
          Length = 652

 Score =  313 bits (802), Expect = 7e-85
 Identities = 151/365 (41%), Positives = 226/365 (61%), Gaps = 17/365 (4%)
 Frame = +3

Query: 9    WPKHRVVTCLDWSPMYPELLLGAYHCNEEAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPL 188
            W KHR +T + WS  +PEL++ +Y  NE   H+PDGV L+W++      PEYV  CQSP+
Sbjct: 275  WTKHRSITDISWSTKHPELVVSSYSANEAGSHDPDGVALVWSVNNYFQKPEYVFTCQSPV 334

Query: 189  VSACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNA 368
            ++     +H +LIVGGTYSGQIV+WD R   + P+Q+TPL++  HTHPV ++ V+G+ NA
Sbjct: 335  MTTFFSKFHSTLIVGGTYSGQIVIWDTRAEAK-PVQKTPLSSVGHTHPVYSMAVVGSANA 393

Query: 369  HNLISVSSDGKMCAWSLEMLNAPSETREFSVKQAK-----------------SIAVTCMD 497
            ++L+S+S+D K+C+W+LE L+ P ET E +                      SIAVT + 
Sbjct: 394  NSLVSISTDAKLCSWNLENLSQPIETIELNSSNTNSANKAGGGGSGGGAPNMSIAVTSLV 453

Query: 498  FLSNDVNNFLVGSEDGMVYPGIRHGGKAGLSEGFEGHLGPISGLSSHKVPGAVDFSHLFL 677
            F  N++N+F +G+E+G++    RHG +  ++E ++  LGPI+ +  H   G  DFS  FL
Sbjct: 454  FPENELNHFYIGTEEGVICQAGRHGNRIVMNERYK-ELGPITSVDLHPSKGGADFSQYFL 512

Query: 678  TSSFDWTVKLWSGRDSGSRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTA 857
            +SS DWT KLWS +     PL+SFED  DYVYD  WSPVHP++F++ DG G L +W L  
Sbjct: 513  SSSTDWTCKLWSSKK--ETPLYSFEDYVDYVYDARWSPVHPSIFSTGDGSGTLSLWDLNQ 570

Query: 858  DTEVPISRTQVNPMTALNKCSWHKTGAHVAVGDDSGRISIMDVNEQLYQPSSSAWSDLSH 1037
            D E PI R +++   ++N+ +W   G  + VGD  G +S+ D +E    P+S  +S    
Sbjct: 571  DLEGPIFRHKIS-NRSVNRLAWSHDGKRILVGDSGGSLSLFDSSE-FSSPTSEEYSQFED 628

Query: 1038 TLTEL 1052
             +T++
Sbjct: 629  VMTKM 633

>sp|Q9GZS0|DYI4_HUMAN Dynein intermediate chain 2, axonemal (Axonemal dynein intermediate
            chain 2)
          Length = 605

 Score =  113 bits (282), Expect = 1e-24
 Identities = 94/341 (27%), Positives = 145/341 (42%), Gaps = 15/341 (4%)
 Frame = +3

Query: 21   RVVTCLDWSPMYPELLLGAYHCNE--EAPHEPDGVCLIWNLKYKKDSPEYVLHCQSPLVS 194
            R  T L W P     L  AY C +   AP        IW+L+   + PE  L   SPLV+
Sbjct: 163  RAATHLSWHPDGNRKLAVAYSCLDFQRAPVGMSSDSYIWDLE-NPNKPELALKPSSPLVT 221

Query: 195  ACMPNYHPSLIVGGTYSGQIVLWDIRTNKRTPIQRTPLNATSHTHPVCALTVLGTQNAHN 374
                     +++GG Y+GQI  WD  T K + +       +SH  PV     L ++    
Sbjct: 222  LEFNPKDSHVLLGGCYNGQIACWD--TRKGSLVAELSTIESSHRDPVYGTIWLQSKTGTE 279

Query: 375  LISVSSDGKMCAWSLEMLNAPSETREFSVKQAK----SIAVTCMDFLSNDVNNFLVGSED 542
              S S+DG++  W +  ++ P+E     + + +    ++    ++F S     F+VG+E 
Sbjct: 280  CFSASTDGQVMWWDIRKMSEPTEVVILDITKKEQLENALGAISLEFESTLPTKFMVGTEQ 339

Query: 543  GMVYPGIRHGGKAG--LSEGFEGHLGPISGLSSHKVPGAVDFSHLFLTSSFDWTVKLWSG 716
            G+V    R    +   +   F GH GPI  L  +       +   FLT   DWT ++WS 
Sbjct: 340  GIVISCNRKAKTSAEKIVCTFPGHHGPIYALQRNPF-----YPKNFLTVG-DWTARIWS- 392

Query: 717  RDSGSRPLHSFEDNGDYVYDVAWSPVHPAVFASVDGQGLLDIWKLTADTEVPISRTQVNP 896
             DS    +   + +  Y+ D AWSPV P VF +    G LDIW    +        Q +P
Sbjct: 393  EDSRESSIMWTKYHMAYLTDAAWSPVRPTVFFTTRMDGTLDIWDFMFE--------QCDP 444

Query: 897  MTALNKCS-------WHKTGAHVAVGDDSGRISIMDVNEQL 998
              +L  C            G  +A G   G  ++++V+  L
Sbjct: 445  TLSLKVCDEALFCLRVQDNGCLIACGSQLGTTTLLEVSPGL 485

>sp|P27766|DYI3_CHLRE Dynein, 70 kDa intermediate chain, flagellar outer arm (IC69) (IC70)
          Length = 567

 Score =  111 bits (277), Expect = 5e-24
 Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 7/317 (2%)
 Frame = +3

Query: 105  EPDGVCL---IWNLKYKKDSPEYVLHCQSPLVSACMPNYHPSLIVGGTYSGQIVLWDIRT 275
            +P G+ L   IW++    ++PEY +   S +  A       +L+  G Y+GQ+  +D+R 
Sbjct: 190  QPAGMPLSSYIWDVN-NPNTPEYEMVPTSQICCAKFNLKDNNLVGAGQYNGQLAYFDVRK 248

Query: 276  NKRTPIQRTPLNATSHTHPVCALTVLGTQNAHNLISVSSDGKMCAWSLEMLNAPSETREF 455
                P++ TP++  SH  P+     L ++     ++VS+DG +  W L  +N   E    
Sbjct: 249  GNG-PVEATPIDI-SHRDPIYDFAWLQSKTGTECMTVSTDGNVLWWDLRKMNECVENMPL 306

Query: 456  SVKQAKS-IAVTCMDFLSN-DVNNFLVGSEDGMVYPGIRHGGKA--GLSEGFEGHLGPIS 623
              K +++ +   C+++ +N    NF+VG+E G ++   R        +     GH GPI 
Sbjct: 307  KEKNSETTVGGVCLEYDTNAGPTNFMVGTEQGQIFSCNRKAKNPVDRVKYVLSGHHGPIY 366

Query: 624  GLSSHKVPGAVDFSHLFLTSSFDWTVKLWSGRDSGSRPLHSFEDNGDYVYDVAWSPVHPA 803
            GL  +       F+  +  S  DWT ++W    +   P+ + + +  Y+    WSP  P 
Sbjct: 367  GLRRNP------FNSKYFLSIGDWTARVWVEDTAVKTPILTTKYHPTYLTGGTWSPSRPG 420

Query: 804  VFASVDGQGLLDIWKLTADTEVPISRTQVNPMTALNKCSWHKTGAHVAVGDDSGRISIMD 983
            VF ++   G +D+W L      P    QV+ + AL   +  ++G  VAVG   G  S++ 
Sbjct: 421  VFFTIKMDGAMDVWDLYYKHNEPTLTVQVSDL-ALTAFAVQESGGTVAVGTSDGCTSVLQ 479

Query: 984  VNEQLYQPSSSAWSDLS 1034
            ++  L + S +  ++++
Sbjct: 480  LSTGLSEASPAEKANIN 496

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,305,337
Number of Sequences: 369166
Number of extensions: 3447885
Number of successful extensions: 9604
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9490
length of database: 68,354,980
effective HSP length: 113
effective length of database: 47,479,925
effective search space used: 14291457425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01147

  1. Dr_sW_028_O20
  2. Dr_sW_004_L10
  3. Dr_sW_027_J02