Planaria EST Database

DrC_01136

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01136
         (896 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P68372|TBBX_MOUSE  Tubulin beta-? chain >gi|55977480|sp|P...   555   e-158
sp|P11833|TBB_PARLI  Tubulin beta chain (Beta tubulin)            554   e-157
sp|P30883|TBB4_XENLA  Tubulin beta-4 chain                        553   e-157
sp|Q9D6F9|TBB4_MOUSE  Tubulin beta-4 chain                        553   e-157
sp|P09206|TBB3_CHICK  Tubulin beta-3 chain (Beta-tubulin cla...   551   e-156
sp|Q9YHC3|TBB1_GADMO  Tubulin beta-1 chain (Beta-1 tubulin)       550   e-156
sp|Q7JJU6|TBB2_PANTR  Tubulin beta-2 chain >gi|56754798|sp|P...   549   e-156
sp|P02554|TBB_PIG  Tubulin beta chain                             549   e-156
sp|P04350|TBB4_HUMAN  Tubulin beta-4 chain (Tubulin 5 beta)       549   e-156
sp|P36221|TBB1_NOTCO  Tubulin beta-1 chain (Beta-1 tubulin)       549   e-156

>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
 sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
          Length = 445

 Score =  555 bits (1430), Expect = e-158
 Identities = 269/298 (90%), Positives = 276/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301

>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
          Length = 447

 Score =  554 bits (1428), Expect = e-157
 Identities = 268/298 (89%), Positives = 276/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4   IVHMQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301

>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
          Length = 445

 Score =  553 bits (1425), Expect = e-157
 Identities = 268/298 (89%), Positives = 275/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301

>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
          Length = 444

 Score =  553 bits (1425), Expect = e-157
 Identities = 268/298 (89%), Positives = 275/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GG YVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVDAVLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREE+PDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGLAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301

>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
          Length = 445

 Score =  551 bits (1419), Expect = e-156
 Identities = 267/298 (89%), Positives = 275/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPF Q+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVP+LTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFDAKNMMA 301

>sp|Q9YHC3|TBB1_GADMO Tubulin beta-1 chain (Beta-1 tubulin)
          Length = 445

 Score =  550 bits (1416), Expect = e-156
 Identities = 267/298 (89%), Positives = 274/298 (91%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RINVYYNEASGGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSG FGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGAFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTP+YGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYRSLTVPELTQQMFD KNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDGKNMMA 301

>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
 sp|P69895|TBB2_MACMU Tubulin beta-2 chain
 sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
 sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
 sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
 sp|P69897|TBB5_RAT Tubulin beta-5 chain
 sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
           tubulin)
          Length = 444

 Score =  549 bits (1415), Expect = e-156
 Identities = 264/298 (88%), Positives = 276/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEA+GGKYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           +L+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQ+FDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMA 301

>sp|P02554|TBB_PIG Tubulin beta chain
          Length = 445

 Score =  549 bits (1414), Expect = e-156
 Identities = 264/298 (88%), Positives = 275/298 (92%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVH+QAGQCGNQIGAKFWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA+G KYVPRA
Sbjct: 4   IVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           +L+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  ILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           +ESCDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 SESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301

>sp|P04350|TBB4_HUMAN Tubulin beta-4 chain (Tubulin 5 beta)
          Length = 444

 Score =  549 bits (1414), Expect = e-156
 Identities = 266/298 (89%), Positives = 273/298 (91%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GG YVPRA
Sbjct: 4   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVDAVLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AESCDCLQGFQ                   K+REE+PDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AESCDCLQGFQLTHSLGGGTGSGMGTLLISKMREEFPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFFMP  APLTSRGSQQYR LTVPELTQQMFDAKNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFMPAFAPLTSRGSQQYRGLTVPELTQQMFDAKNMMA 301

>sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin)
          Length = 446

 Score =  549 bits (1414), Expect = e-156
 Identities = 265/298 (88%), Positives = 274/298 (91%)
 Frame = +1

Query: 1   IVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRA 180
           IVHLQAGQCGNQIG+KFWEVISDEHGIDPTG+YHGDSDLQL+RINVYYNEASGGKYVPRA
Sbjct: 4   IVHLQAGQCGNQIGSKFWEVISDEHGIDPTGSYHGDSDLQLDRINVYYNEASGGKYVPRA 63

Query: 181 VLIDLEPGTMDSVRSGPFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKE 360
           VL+DLEPGTMDSVRSGPFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE
Sbjct: 64  VLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE 123

Query: 361 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPKVSDTVVEPY 540
           AE CDCLQGFQ                   KIREEYPDRIM TFSVVPSPKVSDTVVEPY
Sbjct: 124 AEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPY 183

Query: 541 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 720
           NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP
Sbjct: 184 NATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFP 243

Query: 721 GQLNADLRKLAVNMVPFPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 894
           GQLNADLRKLAVNMVPFPRLHFF+PG APLTSRG QQYRSLTVPELTQQMFD+KNMMA
Sbjct: 244 GQLNADLRKLAVNMVPFPRLHFFIPGFAPLTSRGGQQYRSLTVPELTQQMFDSKNMMA 301

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,459,709
Number of Sequences: 369166
Number of extensions: 2156363
Number of successful extensions: 6253
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5695
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01136

  1. Dr_sW_010_B09
  2. Dr_sW_028_J14
  3. Dr_sW_006_F02