Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_F02
(850 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 521 e-147
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 521 e-147
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 519 e-147
sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain 519 e-147
sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin cla... 516 e-146
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 516 e-146
sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin) 516 e-146
sp|P02554|TBB_PIG Tubulin beta chain 515 e-146
sp|Q9YHC3|TBB1_GADMO Tubulin beta-1 chain (Beta-1 tubulin) 515 e-146
sp|P04350|TBB4_HUMAN Tubulin beta-4 chain (Tubulin 5 beta) 514 e-146
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 521 bits (1341), Expect = e-147
Identities = 252/282 (89%), Positives = 260/282 (92%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 521 bits (1341), Expect = e-147
Identities = 252/282 (89%), Positives = 260/282 (92%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 519 bits (1336), Expect = e-147
Identities = 251/282 (89%), Positives = 259/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
Length = 444
Score = 519 bits (1336), Expect = e-147
Identities = 251/282 (89%), Positives = 259/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GG YVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVDAVLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREE+PDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGLAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
Length = 445
Score = 516 bits (1330), Expect = e-146
Identities = 250/282 (88%), Positives = 259/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PF Q+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 PFRQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVP+LTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPDLTQQMFDAKNMMA 301
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 516 bits (1328), Expect = e-146
Identities = 248/282 (87%), Positives = 260/282 (92%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQL+RI+VYYNEA+GGKYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQ+FDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMA 301
>sp|P36221|TBB1_NOTCO Tubulin beta-1 chain (Beta-1 tubulin)
Length = 446
Score = 516 bits (1328), Expect = e-146
Identities = 249/282 (88%), Positives = 258/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTG+YHGDSDLQL+RINVYYNEASGGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGSYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAE CDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEGCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFF+PG APLTSRG QQYRSLTVPELTQQMFD+KNMMA
Sbjct: 260 FPRLHFFIPGFAPLTSRGGQQYRSLTVPELTQQMFDSKNMMA 301
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 515 bits (1327), Expect = e-146
Identities = 248/282 (87%), Positives = 259/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTG+YHGDSDLQLERINVYYNEA+G KYVPRA+L+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKE+ESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYR+LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|Q9YHC3|TBB1_GADMO Tubulin beta-1 chain (Beta-1 tubulin)
Length = 445
Score = 515 bits (1327), Expect = e-146
Identities = 250/282 (88%), Positives = 258/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQL+RINVYYNEASGGKYVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
FGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVD+VLD VRKEAESCDCLQGFQ
Sbjct: 80 AFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
KIREEYPDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTP+YGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMPG APLTSRGSQQYRSLTVPELTQQMFD KNMMA
Sbjct: 260 FPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDGKNMMA 301
>sp|P04350|TBB4_HUMAN Tubulin beta-4 chain (Tubulin 5 beta)
Length = 444
Score = 514 bits (1325), Expect = e-146
Identities = 249/282 (88%), Positives = 257/282 (91%)
Frame = +3
Query: 3 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEASGGKYVPRAVLIDLEPGTMDSVRSG 182
FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA+GG YVPRAVL+DLEPGTMDSVRSG
Sbjct: 20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSG 79
Query: 183 PFGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDAVLDTVRKEAESCDCLQGFQXXXXX 362
PFGQ+FRPDNF+FGQSGAGNNWAKGHYTEGAELVDAVLD VRKEAESCDCLQGFQ
Sbjct: 80 PFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSL 139
Query: 363 XXXXXXXXXXXXXXKIREEYPDRIMTTFSVVPSPEVSDTVVEPYNATLSVHQLVENTDET 542
K+REE+PDRIM TFSVVPSP+VSDTVVEPYNATLSVHQLVENTDET
Sbjct: 140 GGGTGSGMGTLLISKMREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET 199
Query: 543 FCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 722
+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP
Sbjct: 200 YCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259
Query: 723 FPRLHFFMPGCAPLTSRGSQQYRSLTVPELTQQMFDAKNMMA 848
FPRLHFFMP APLTSRGSQQYR LTVPELTQQMFDAKNMMA
Sbjct: 260 FPRLHFFMPAFAPLTSRGSQQYRGLTVPELTQQMFDAKNMMA 301
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,716,704
Number of Sequences: 369166
Number of extensions: 1942527
Number of successful extensions: 5636
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5092
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)