Planaria EST Database


DrC_01126

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01126
         (509 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38652|PGM1_RAT  Phosphoglucomutase-1 (Glucose phosphomut...   131   1e-30
sp|Q9VUY9|PGM_DROME  Phosphoglucomutase (Glucose phosphomuta...   130   2e-30
sp|Q7KHA1|PGM_DROSI  Phosphoglucomutase (Glucose phosphomuta...   130   2e-30
sp|Q9D0F9|PGM1_MOUSE  Phosphoglucomutase-1 (Glucose phosphom...   129   3e-30
sp|Q4R5E4|PGM1_MACFA  Phosphoglucomutase-1 (Glucose phosphom...   129   5e-30
sp|P36871|PGM1_HUMAN  Phosphoglucomutase-1 (Glucose phosphom...   128   9e-30
sp|P00949|PGM1_RABIT  Phosphoglucomutase-1 (Glucose phosphom...   127   1e-29
sp|Q9SNX2|PGMC_BROIN  Phosphoglucomutase, cytoplasmic (Gluco...   115   6e-26
sp|O49299|PGMC1_ARATH  Probable phosphoglucomutase, cytoplas...   114   2e-25
sp|Q9SM59|PGMP_PEA  Phosphoglucomutase, chloroplast precurso...   113   2e-25
>sp|P38652|PGM1_RAT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
          Length = 562

 Score =  131 bits (329), Expect = 1e-30
 Identities = 61/108 (56%), Positives = 85/108 (78%)
 Frame = +2

Query: 26  IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205
           +GK F A+   +TV+ ADNF+Y+DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI
Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATI 514

Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           R+YIDSY K+A   +   +V L PL+ I L + Q+++ TGR APTVIT
Sbjct: 515 RLYIDSYEKDAAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q9VUY9|PGM_DROME Phosphoglucomutase (Glucose phosphomutase) (PGM)
          Length = 560

 Score =  130 bits (327), Expect = 2e-30
 Identities = 63/114 (55%), Positives = 82/114 (71%)
 Frame = +2

Query: 8   ISGPGVIGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTG 187
           I+ P  +GK++ + G  + VK ADNF YTDP+D S    QG+R++F DGSR++ RLSGTG
Sbjct: 449 ITAPEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGTG 508

Query: 188 SSGATIRIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           SSGAT+R+YIDSY K   +   S  V LKPL++I L I Q+ + TGRNAPTVIT
Sbjct: 509 SSGATVRLYIDSYEKENVLGQAS--VMLKPLIDIALEISQLPKFTGRNAPTVIT 560
>sp|Q7KHA1|PGM_DROSI Phosphoglucomutase (Glucose phosphomutase) (PGM)
          Length = 560

 Score =  130 bits (327), Expect = 2e-30
 Identities = 63/114 (55%), Positives = 82/114 (71%)
 Frame = +2

Query: 8   ISGPGVIGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTG 187
           I+ P  +GK++ + G  + VK ADNF YTDP+D S    QG+R++F DGSR++ RLSGTG
Sbjct: 449 ITAPEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGTG 508

Query: 188 SSGATIRIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           SSGAT+R+YIDSY K   +   S  V LKPL++I L I Q+ + TGRNAPTVIT
Sbjct: 509 SSGATVRLYIDSYEKENVLGQAS--VMLKPLIDIALEISQLPKFTGRNAPTVIT 560
>sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
          Length = 562

 Score =  129 bits (325), Expect = 3e-30
 Identities = 60/108 (55%), Positives = 84/108 (77%)
 Frame = +2

Query: 26  IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205
           +GK F A+   +TV+ ADNF+Y+DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI
Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATI 514

Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           R+YIDSY K+    +   +V L PL+ I L + Q+++ TGR APTVIT
Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
          Length = 562

 Score =  129 bits (323), Expect = 5e-30
 Identities = 59/108 (54%), Positives = 85/108 (78%)
 Frame = +2

Query: 26  IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205
           +GK F A+   +TV+ ADNF+Y+DP+D S ++NQG+R++F+DGSR+I+RLSGTGS+GATI
Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIIFRLSGTGSAGATI 514

Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           R+YIDSY K+    +   +V L PL+ I L + Q+++ TGR+APTVIT
Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRSAPTVIT 562
>sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
          Length = 562

 Score =  128 bits (321), Expect = 9e-30
 Identities = 58/108 (53%), Positives = 84/108 (77%)
 Frame = +2

Query: 26  IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205
           +GK F A+   +TV+ ADNF+Y+DP+D S ++NQG+R++F+DGSR+++RLSGTGS+GATI
Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATI 514

Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           R+YIDSY K+    +   +V L PL+ I L + Q+++ TGR APTVIT
Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|P00949|PGM1_RABIT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1)
          Length = 562

 Score =  127 bits (320), Expect = 1e-29
 Identities = 60/108 (55%), Positives = 83/108 (76%)
 Frame = +2

Query: 26  IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205
           +GK F A+   +TV+ ADNF+Y DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI
Sbjct: 455 VGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATI 514

Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
           R+YIDSY K+    +   +V L PL+ I L + Q+++ TGR APTVIT
Sbjct: 515 RLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q9SNX2|PGMC_BROIN Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM)
          Length = 581

 Score =  115 bits (288), Expect = 6e-26
 Identities = 55/92 (59%), Positives = 72/92 (78%)
 Frame = +2

Query: 74  ADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNAEVAHI 253
           AD F+YTDP+D S +K+QGIR LF DGSRL++RLSGTGS GATIRIYI+ Y K++     
Sbjct: 490 ADEFEYTDPVDGSVSKHQGIRYLFGDGSRLVFRLSGTGSVGATIRIYIEQYEKDSSKTGR 549

Query: 254 SSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
            S  AL PLV++ L + +I+++TGR+APTVIT
Sbjct: 550 ESSDALSPLVDVALKLSKIQELTGRSAPTVIT 581
>sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplasmic 1 (Glucose phosphomutase
           1) (PGM 1)
          Length = 582

 Score =  114 bits (284), Expect = 2e-25
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +2

Query: 62  TVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNAE 241
           +V  AD F+Y DP+D S +K+QGIR LF DGSRL++RLSGTGS GATIR+YI+ Y K+A 
Sbjct: 487 SVASADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDAS 546

Query: 242 VAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
                S+ AL PLV++ L + ++++ TGR+APTVIT
Sbjct: 547 KTGRESQEALSPLVDLALKLSKMEEFTGRSAPTVIT 582
>sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase)
           (PGM)
          Length = 626

 Score =  113 bits (283), Expect = 2e-25
 Identities = 48/97 (49%), Positives = 73/97 (75%)
 Frame = +2

Query: 59  FTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNA 238
           + ++ AD+F YTDP+D S    QG+R +F+DGSR+IYRLSGTGS+GAT+R+YI+ +  + 
Sbjct: 530 YVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDV 589

Query: 239 EVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349
               + +++ALKPL+++ LS+ ++K  TGR  PTVIT
Sbjct: 590 SKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT 626
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,081,760
Number of Sequences: 369166
Number of extensions: 1155907
Number of successful extensions: 3172
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01126

  1. Dr_sW_028_H09
  2. Dr_sW_007_E07
  3. Dr_sW_020_K22