DrC_01126
- Cluster detail
- GO Category :
- Consensus Sequence :
BLASTX 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DrC_01126 (509 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|P38652|PGM1_RAT Phosphoglucomutase-1 (Glucose phosphomut... 131 1e-30 sp|Q9VUY9|PGM_DROME Phosphoglucomutase (Glucose phosphomuta... 130 2e-30 sp|Q7KHA1|PGM_DROSI Phosphoglucomutase (Glucose phosphomuta... 130 2e-30 sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 (Glucose phosphom... 129 3e-30 sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 (Glucose phosphom... 129 5e-30 sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 (Glucose phosphom... 128 9e-30 sp|P00949|PGM1_RABIT Phosphoglucomutase-1 (Glucose phosphom... 127 1e-29 sp|Q9SNX2|PGMC_BROIN Phosphoglucomutase, cytoplasmic (Gluco... 115 6e-26 sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplas... 114 2e-25 sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplast precurso... 113 2e-25
>sp|P38652|PGM1_RAT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1) Length = 562 Score = 131 bits (329), Expect = 1e-30 Identities = 61/108 (56%), Positives = 85/108 (78%) Frame = +2 Query: 26 IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205 +GK F A+ +TV+ ADNF+Y+DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATI 514 Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 R+YIDSY K+A + +V L PL+ I L + Q+++ TGR APTVIT Sbjct: 515 RLYIDSYEKDAAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q9VUY9|PGM_DROME Phosphoglucomutase (Glucose phosphomutase) (PGM) Length = 560 Score = 130 bits (327), Expect = 2e-30 Identities = 63/114 (55%), Positives = 82/114 (71%) Frame = +2 Query: 8 ISGPGVIGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTG 187 I+ P +GK++ + G + VK ADNF YTDP+D S QG+R++F DGSR++ RLSGTG Sbjct: 449 ITAPEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGTG 508 Query: 188 SSGATIRIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 SSGAT+R+YIDSY K + S V LKPL++I L I Q+ + TGRNAPTVIT Sbjct: 509 SSGATVRLYIDSYEKENVLGQAS--VMLKPLIDIALEISQLPKFTGRNAPTVIT 560
>sp|Q7KHA1|PGM_DROSI Phosphoglucomutase (Glucose phosphomutase) (PGM) Length = 560 Score = 130 bits (327), Expect = 2e-30 Identities = 63/114 (55%), Positives = 82/114 (71%) Frame = +2 Query: 8 ISGPGVIGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTG 187 I+ P +GK++ + G + VK ADNF YTDP+D S QG+R++F DGSR++ RLSGTG Sbjct: 449 ITAPEFVGKSYSSGGKTYKVKEADNFSYTDPVDKSVATKQGLRIVFEDGSRIVVRLSGTG 508 Query: 188 SSGATIRIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 SSGAT+R+YIDSY K + S V LKPL++I L I Q+ + TGRNAPTVIT Sbjct: 509 SSGATVRLYIDSYEKENVLGQAS--VMLKPLIDIALEISQLPKFTGRNAPTVIT 560
>sp|Q9D0F9|PGM1_MOUSE Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1) Length = 562 Score = 129 bits (325), Expect = 3e-30 Identities = 60/108 (55%), Positives = 84/108 (77%) Frame = +2 Query: 26 IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205 +GK F A+ +TV+ ADNF+Y+DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISKNQGLRLIFADGSRIIFRLSGTGSAGATI 514 Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 R+YIDSY K+ + +V L PL+ I L + Q+++ TGR APTVIT Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q4R5E4|PGM1_MACFA Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1) Length = 562 Score = 129 bits (323), Expect = 5e-30 Identities = 59/108 (54%), Positives = 85/108 (78%) Frame = +2 Query: 26 IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205 +GK F A+ +TV+ ADNF+Y+DP+D S ++NQG+R++F+DGSR+I+RLSGTGS+GATI Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIIFRLSGTGSAGATI 514 Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 R+YIDSY K+ + +V L PL+ I L + Q+++ TGR+APTVIT Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRSAPTVIT 562
>sp|P36871|PGM1_HUMAN Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1) Length = 562 Score = 128 bits (321), Expect = 9e-30 Identities = 58/108 (53%), Positives = 84/108 (77%) Frame = +2 Query: 26 IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205 +GK F A+ +TV+ ADNF+Y+DP+D S ++NQG+R++F+DGSR+++RLSGTGS+GATI Sbjct: 455 VGKQFSANDKVYTVEKADNFEYSDPVDGSISRNQGLRLIFTDGSRIVFRLSGTGSAGATI 514 Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 R+YIDSY K+ + +V L PL+ I L + Q+++ TGR APTVIT Sbjct: 515 RLYIDSYEKDVAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|P00949|PGM1_RABIT Phosphoglucomutase-1 (Glucose phosphomutase 1) (PGM 1) Length = 562 Score = 127 bits (320), Expect = 1e-29 Identities = 60/108 (55%), Positives = 83/108 (76%) Frame = +2 Query: 26 IGKTFEADGHHFTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATI 205 +GK F A+ +TV+ ADNF+Y DP+D S +KNQG+R++F+DGSR+I+RLSGTGS+GATI Sbjct: 455 VGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGLRLIFADGSRIIFRLSGTGSAGATI 514 Query: 206 RIYIDSYHKNAEVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 R+YIDSY K+ + +V L PL+ I L + Q+++ TGR APTVIT Sbjct: 515 RLYIDSYEKDNAKINQDPQVMLAPLISIALKVSQLQERTGRTAPTVIT 562
>sp|Q9SNX2|PGMC_BROIN Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM) Length = 581 Score = 115 bits (288), Expect = 6e-26 Identities = 55/92 (59%), Positives = 72/92 (78%) Frame = +2 Query: 74 ADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNAEVAHI 253 AD F+YTDP+D S +K+QGIR LF DGSRL++RLSGTGS GATIRIYI+ Y K++ Sbjct: 490 ADEFEYTDPVDGSVSKHQGIRYLFGDGSRLVFRLSGTGSVGATIRIYIEQYEKDSSKTGR 549 Query: 254 SSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 S AL PLV++ L + +I+++TGR+APTVIT Sbjct: 550 ESSDALSPLVDVALKLSKIQELTGRSAPTVIT 581
>sp|O49299|PGMC1_ARATH Probable phosphoglucomutase, cytoplasmic 1 (Glucose phosphomutase 1) (PGM 1) Length = 582 Score = 114 bits (284), Expect = 2e-25 Identities = 54/96 (56%), Positives = 73/96 (76%) Frame = +2 Query: 62 TVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNAE 241 +V AD F+Y DP+D S +K+QGIR LF DGSRL++RLSGTGS GATIR+YI+ Y K+A Sbjct: 487 SVASADEFEYKDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDAS 546 Query: 242 VAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 S+ AL PLV++ L + ++++ TGR+APTVIT Sbjct: 547 KTGRESQEALSPLVDLALKLSKMEEFTGRSAPTVIT 582
>sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) Length = 626 Score = 113 bits (283), Expect = 2e-25 Identities = 48/97 (49%), Positives = 73/97 (75%) Frame = +2 Query: 59 FTVKVADNFQYTDPIDHSHTKNQGIRVLFSDGSRLIYRLSGTGSSGATIRIYIDSYHKNA 238 + ++ AD+F YTDP+D S QG+R +F+DGSR+IYRLSGTGS+GAT+R+YI+ + + Sbjct: 530 YVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDV 589 Query: 239 EVAHISSEVALKPLVEIGLSICQIKQITGRNAPTVIT 349 + +++ALKPL+++ LS+ ++K TGR PTVIT Sbjct: 590 SKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT 626
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,081,760
Number of Sequences: 369166
Number of extensions: 1155907
Number of successful extensions: 3172
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3255600150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Cluster detail
