Planaria EST Database

DrC_01115

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01115
         (1016 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26308|GBB1_DROME  Guanine nucleotide-binding protein bet...   190   5e-48
sp|O45040|GBB1_HOMAM  Guanine nucleotide-binding protein G(I...   188   2e-47
sp|Q9HAV0|GBB4_HUMAN  Guanine nucleotide-binding protein bet...   187   5e-47
sp|P17343|GBB1_CAEEL  Guanine nucleotide-binding protein bet...   186   1e-46
sp|P79959|GBB1_XENLA  Guanine nucleotide-binding protein G(I...   185   2e-46
sp|Q6PH57|GBB1_BRARE  Guanine nucleotide-binding protein G(I...   185   2e-46
sp|P54311|GBB1_RAT  Guanine nucleotide-binding protein G(I)/...   184   3e-46
sp|Q6TMK6|GBB1_CRIGR  Guanine nucleotide-binding protein G(I...   184   3e-46
sp|Q5R5W8|GBB1_PONPY  Guanine nucleotide-binding protein G(I...   184   3e-46
sp|O35353|GBB4_RAT  Guanine nucleotide-binding protein beta ...   183   6e-46

>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein beta subunit 1
          Length = 340

 Score =  190 bits (483), Expect = 5e-48
 Identities = 88/165 (53%), Positives = 115/165 (69%)
 Frame = +1

Query: 4   VAQFIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFF 183
           V  F+GH  DV A++L+  +   F S + D S ++WDIR   C Q F GH  D+N V FF
Sbjct: 177 VTSFLGHTGDVMALSLAP-QCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFF 235

Query: 184 PKDNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNC 363
           P +   F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSGRLL+AGYDD+NC
Sbjct: 236 P-NGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNC 294

Query: 364 HVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           +VWD ++ ER GI++ HD RVSC+ V+ NG+ +ATGSWDS   +W
Sbjct: 295 NVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVW 339


 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GH   ++   F   D+   VTSS D +C LWD     
Sbjct: 118 DNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFL--DDNQIVTSSGDMSCGLWDIETGL 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
            +  +     T    ++SL+   +  ++G  D +  +WD+           H+  ++ V+
Sbjct: 176 QVTSFLGH--TGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVT 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGQAFATGSDDATCRLFDIRADQ 259


 Score = 35.0 bits (79), Expect = 0.34
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
 Frame = +1

Query: 190 DNYGFVTSSDDGTCRLWDARAD---QSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYN 360
           D+   V++S DG   +WD+       +I + +   +TC     + + SG  +  G  D  
Sbjct: 66  DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC-----AYAPSGSYVACGGLDNM 120

Query: 361 CHVWDV-LREERVGI---MSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           C ++++  RE  V +   +  H G +SC     +   I T S D SC +W
Sbjct: 121 CSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDN-QIVTSSGDMSCGLW 169

>sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
          Length = 340

 Score =  188 bits (478), Expect = 2e-47
 Identities = 87/163 (53%), Positives = 114/163 (69%)
 Frame = +1

Query: 10  QFIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPK 189
           QF GH  DV +++LS      F S + D S ++WDIR   C Q F GH  D+N V FFP 
Sbjct: 179 QFTGHTGDVMSLSLSP-NMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVTFFP- 236

Query: 190 DNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHV 369
           + + F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSG+LL+AGYDD+NC+V
Sbjct: 237 NGHAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGKLLLAGYDDFNCNV 296

Query: 370 WDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           WD +R ER G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 297 WDSMRTERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIW 339


 Score = 62.0 bits (149), Expect = 3e-09
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I+ ++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFV--DDNQIVTSSGDMTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SLS + R   +G  D +  +WD+           H+  ++ V+
Sbjct: 176 QCTQFTGH--TGDVMSLSLSPNMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVT 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGHAFATGSDDATCRLFDIRADQ 259


 Score = 37.4 bits (85), Expect = 0.069
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 1/161 (0%)
 Frame = +1

Query: 19  GHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNY 198
           GH   + A+   S   ++  S S D    +WD  +          +  V    + P  +Y
Sbjct: 53  GHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSY 111

Query: 199 GFVTSSDDGTCRLWDARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWD 375
                  D  C ++  +  + ++ V  +     G  S         ++    D  C +WD
Sbjct: 112 -VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFVDDNQIVTSSGDMTCALWD 170

Query: 376 VLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           +   ++    + H G V  +S+SPN     +G+ D+S  +W
Sbjct: 171 IETGQQCTQFTGHTGDVMSLSLSPNMRTFTSGACDASAKLW 211

>sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
           chain 4)
          Length = 340

 Score =  187 bits (474), Expect = 5e-47
 Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDM--FASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFP 186
           F GH  DV +++LS    DM  F S + D S ++WDIR   C Q F GH  D+N V FFP
Sbjct: 180 FTGHSGDVMSLSLSP---DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFP 236

Query: 187 KDNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCH 366
            + Y F T SDD TCRL+D RADQ + +Y+ D I CG TSV+ SKSGRLL+AGYDD+NC+
Sbjct: 237 -NGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCN 295

Query: 367 VWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           VWD L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 296 VWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339


 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL--DDSQIVTSSGDTTCALWDIETAQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    +    S+SLS   R  ++G  D +  +WD+         + H   ++ VS
Sbjct: 176 QTTTFTGH--SGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVS 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGYAFATGSDDATCRLFDLRADQ 259


 Score = 39.7 bits (91), Expect = 0.014
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
 Frame = +1

Query: 64  SDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWD 243
           S +  S S D    IWD  +          +  V    + P  NY       D  C +++
Sbjct: 67  SRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNY-VACGGLDNICSIYN 125

Query: 244 ARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDG 420
            +  + ++ V  +     G  S         ++    D  C +WD+   ++    + H G
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSG 185

Query: 421 RVSCVSVSPNGVGIATGSWDSSCLIW 498
            V  +S+SP+     +G+ D+S  +W
Sbjct: 186 DVMSLSLSPDMRTFVSGACDASSKLW 211

>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein beta subunit 1
 sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein beta subunit 1
          Length = 340

 Score =  186 bits (471), Expect = 1e-46
 Identities = 87/162 (53%), Positives = 111/162 (68%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++LS      F S + D S ++WDIR   C Q F GH  D+N V FFP  
Sbjct: 180 FTGHTGDVMSLSLSPDFRT-FISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSGRLL AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D +R+ER G+++ HD RVSC+ V+ +G+ + TGSWDS   IW
Sbjct: 298 DSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339


 Score = 63.2 bits (152), Expect = 1e-09
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I+ ++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL--DDNQIVTSSGDMTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SLS   R  I+G  D +  +WD+           H+  ++ V+
Sbjct: 176 QCTAFTGH--TGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVA 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             P+G   ATGS D++C ++  +  Q
Sbjct: 234 FFPSGNAFATGSDDATCRLFDIRADQ 259


 Score = 35.0 bits (79), Expect = 0.34
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
 Frame = +1

Query: 148 GHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARAD---QSIAVYTDDYITCGSTSVSLS 318
           GH   +  + +   D+   V++S DG   +WD+       +I + +   +TC     + +
Sbjct: 53  GHLAKIYAMHW-ASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC-----AYA 106

Query: 319 KSGRLLIAGYDDYNCHVWDV-LREERVGI---MSAHDGRVSCVSVSPNGVGIATGSWDSS 486
            SG  +  G  D  C ++ +  RE  V +   +  H G +SC     +   I T S D +
Sbjct: 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMT 165

Query: 487 CLIWTSKPSQ 516
           C +W  +  Q
Sbjct: 166 CALWDIETGQ 175

>sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1) (XGbeta1)
          Length = 340

 Score =  185 bits (469), Expect = 2e-46
 Identities = 85/162 (52%), Positives = 112/162 (69%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++L+   S  F S + D S ++WD+R   C Q F GH  D+N + FFP  
Sbjct: 180 FTGHTGDVMSLSLAPD-SRCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ + VY+ D I CG TSV+ SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339


 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   +TSS D TC LWD    Q
Sbjct: 118 DNICPIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SL+   R  ++G  D +  +WDV         + H+  ++ + 
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDSRCFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259


 Score = 30.8 bits (68), Expect = 6.4
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
           RLL++   D    +WD     +V  +      V   + +P+G  +A G  D+ C I+  K
Sbjct: 68  RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICPIYNLK 127

>sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
          Length = 340

 Score =  185 bits (469), Expect = 2e-46
 Identities = 84/162 (51%), Positives = 113/162 (69%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++L+   + +F S + D S ++WD+R   C Q F GH  D+N + FFP  
Sbjct: 180 FAGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ + VY+ D I CG TSV+ SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339


 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +     T    S+SL+   RL ++G  D +  +WDV         + H+  ++ + 
Sbjct: 176 QTTTFAGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259


 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
           RLL++   D    +WD     +V  +      V   + +P+G  +A G  D+ C I+  K
Sbjct: 68  RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127

>sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
 sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
 sp|P62873|GBB1_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
 sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
 sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
          Length = 340

 Score =  184 bits (468), Expect = 3e-46
 Identities = 84/162 (51%), Positives = 112/162 (69%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++L+   + +F S + D S ++WD+R   C Q F GH  D+N + FFP  
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ +  Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339


 Score = 67.0 bits (162), Expect = 8e-11
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SL+   RL ++G  D +  +WDV         + H+  ++ + 
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259


 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
           RLL++   D    +WD     +V  +      V   + +P+G  +A G  D+ C I+  K
Sbjct: 68  RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127

>sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
          Length = 340

 Score =  184 bits (468), Expect = 3e-46
 Identities = 84/162 (51%), Positives = 112/162 (69%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++L+   + +F S + D S ++WD+R   C Q F GH  D+N + FFP  
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ +  Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339


 Score = 67.0 bits (162), Expect = 8e-11
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   DN   VTSS+D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL-NDNQ-IVTSSEDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SL+   RL ++G  D +  +WDV         + H+  ++ + 
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259


 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
           RLL++   D    +WD     +V  +      V   + +P+G  +A G  D+ C I+  K
Sbjct: 68  RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127

>sp|Q5R5W8|GBB1_PONPY Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
           (Transducin beta chain 1)
          Length = 340

 Score =  184 bits (467), Expect = 3e-46
 Identities = 84/162 (51%), Positives = 112/162 (69%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++L+   + +F S + D S ++WD+R   C Q F GH  D+N + FFP  
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
           N  F T SDD TCRL+D RADQ +  Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DALKADRAGVLAGHDDRVSCLGVTDDGMAVATGSWDSFLKIW 339


 Score = 67.0 bits (162), Expect = 8e-11
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   VTSS D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    T    S+SL+   RL ++G  D +  +WDV         + H+  ++ + 
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             PNG   ATGS D++C ++  +  Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259


 Score = 31.2 bits (69), Expect = 4.9
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
           RLL++   D    +WD     +V  +      V   + +P+G  +A G  D+ C I+  K
Sbjct: 68  RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127

>sp|O35353|GBB4_RAT Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
           chain 4)
          Length = 340

 Score =  183 bits (465), Expect = 6e-46
 Identities = 86/162 (53%), Positives = 109/162 (67%)
 Frame = +1

Query: 13  FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
           F GH  DV +++LS      F S + D S ++WDIR   C Q F GH  D+N V FFP  
Sbjct: 180 FTGHSGDVMSLSLSPDLKT-FVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPS- 237

Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
            Y F T SDD TCRL+D RADQ + +Y+ D I CG TSV+ SKSGRLL+AGYDD+NC VW
Sbjct: 238 GYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVW 297

Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
           D L+  R G+++ HD RVSC+ V+ +G+ +ATGSWDS   IW
Sbjct: 298 DALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339


 Score = 59.3 bits (142), Expect = 2e-08
 Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
 Frame = +1

Query: 91  DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
           D  C I++++++    +  +   GHT  ++   F   D+   +TSS D TC LWD    Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL--DDGQIITSSGDTTCALWDIETGQ 175

Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
               +T    +    S+SLS   +  ++G  D +  +WD+         + H   ++ VS
Sbjct: 176 QTTTFTGH--SGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVS 233

Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
             P+G   ATGS D++C ++  +  Q
Sbjct: 234 FFPSGYAFATGSDDATCRLFDLRADQ 259


 Score = 39.3 bits (90), Expect = 0.018
 Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
 Frame = +1

Query: 64  SDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWD 243
           S +  S S D    IWD  +          +  V    + P  NY       D  C +++
Sbjct: 67  SRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNY-VACGGLDNICSIYN 125

Query: 244 ARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDG 420
            +  + ++ V  +     G  S         +I    D  C +WD+   ++    + H G
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSG 185

Query: 421 RVSCVSVSPNGVGIATGSWDSSCLIW 498
            V  +S+SP+     +G+ D+S  +W
Sbjct: 186 DVMSLSLSPDLKTFVSGACDASSKLW 211

  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,611,817
Number of Sequences: 369166
Number of extensions: 2002412
Number of successful extensions: 7875
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6602
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10861812665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Cluster detail

DrC_01115

  1. Dr_sW_028_C04
  2. Dr_sW_002_C09
  3. Dr_sW_023_C22