Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_028_C04
(634 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26308|GBB1_DROME Guanine nucleotide-binding protein bet... 190 2e-48
sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I... 188 9e-48
sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein bet... 187 3e-47
sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein bet... 186 6e-47
sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I... 185 1e-46
sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I... 185 1e-46
sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/... 184 1e-46
sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I... 184 1e-46
sp|Q5R5W8|GBB1_PONPY Guanine nucleotide-binding protein G(I... 184 2e-46
sp|O35353|GBB4_RAT Guanine nucleotide-binding protein beta ... 183 3e-46
>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 190 bits (483), Expect = 2e-48
Identities = 88/165 (53%), Positives = 115/165 (69%)
Frame = +1
Query: 4 VAQFIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFF 183
V F+GH DV A++L+ + F S + D S ++WDIR C Q F GH D+N V FF
Sbjct: 177 VTSFLGHTGDVMALSLAP-QCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFF 235
Query: 184 PKDNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNC 363
P + F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSGRLL+AGYDD+NC
Sbjct: 236 P-NGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 364 HVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
+VWD ++ ER GI++ HD RVSC+ V+ NG+ +ATGSWDS +W
Sbjct: 295 NVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSFLRVW 339
Score = 54.3 bits (129), Expect = 3e-07
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GH ++ F D+ VTSS D +C LWD
Sbjct: 118 DNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFL--DDNQIVTSSGDMSCGLWDIETGL 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+ + T ++SL+ + ++G D + +WD+ H+ ++ V+
Sbjct: 176 QVTSFLGH--TGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVT 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGQAFATGSDDATCRLFDIRADQ 259
Score = 35.0 bits (79), Expect = 0.16
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = +1
Query: 190 DNYGFVTSSDDGTCRLWDARAD---QSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYN 360
D+ V++S DG +WD+ +I + + +TC + + SG + G D
Sbjct: 66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTC-----AYAPSGSYVACGGLDNM 120
Query: 361 CHVWDV-LREERVGI---MSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
C ++++ RE V + + H G +SC + I T S D SC +W
Sbjct: 121 CSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDN-QIVTSSGDMSCGLW 169
>sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 188 bits (478), Expect = 9e-48
Identities = 87/163 (53%), Positives = 114/163 (69%)
Frame = +1
Query: 10 QFIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPK 189
QF GH DV +++LS F S + D S ++WDIR C Q F GH D+N V FFP
Sbjct: 179 QFTGHTGDVMSLSLSP-NMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVTFFP- 236
Query: 190 DNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHV 369
+ + F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSG+LL+AGYDD+NC+V
Sbjct: 237 NGHAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGKLLLAGYDDFNCNV 296
Query: 370 WDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
WD +R ER G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 297 WDSMRTERAGVLAGHDNRVSCLGVTEDGMAVATGSWDSFLKIW 339
Score = 62.0 bits (149), Expect = 1e-09
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I+ ++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFV--DDNQIVTSSGDMTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SLS + R +G D + +WD+ H+ ++ V+
Sbjct: 176 QCTQFTGH--TGDVMSLSLSPNMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVT 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGHAFATGSDDATCRLFDIRADQ 259
Score = 37.4 bits (85), Expect = 0.032
Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 1/161 (0%)
Frame = +1
Query: 19 GHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNY 198
GH + A+ S ++ S S D +WD + + V + P +Y
Sbjct: 53 GHLAKIYAMHWGSDSRNL-VSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSY 111
Query: 199 GFVTSSDDGTCRLWDARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWD 375
D C ++ + + ++ V + G S ++ D C +WD
Sbjct: 112 -VACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFVDDNQIVTSSGDMTCALWD 170
Query: 376 VLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
+ ++ + H G V +S+SPN +G+ D+S +W
Sbjct: 171 IETGQQCTQFTGHTGDVMSLSLSPNMRTFTSGACDASAKLW 211
Score = 29.6 bits (65), Expect = 6.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
R L++ D VWD +V + V + +P+G +A G D+ C I++ K
Sbjct: 68 RNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLK 127
>sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
chain 4)
Length = 340
Score = 187 bits (474), Expect = 3e-47
Identities = 88/164 (53%), Positives = 114/164 (69%), Gaps = 2/164 (1%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDM--FASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFP 186
F GH DV +++LS DM F S + D S ++WDIR C Q F GH D+N V FFP
Sbjct: 180 FTGHSGDVMSLSLSP---DMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFP 236
Query: 187 KDNYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCH 366
+ Y F T SDD TCRL+D RADQ + +Y+ D I CG TSV+ SKSGRLL+AGYDD+NC+
Sbjct: 237 -NGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCN 295
Query: 367 VWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
VWD L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 296 VWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 63.2 bits (152), Expect = 5e-10
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL--DDSQIVTSSGDTTCALWDIETAQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T + S+SLS R ++G D + +WD+ + H ++ VS
Sbjct: 176 QTTTFTGH--SGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVS 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGYAFATGSDDATCRLFDLRADQ 259
Score = 39.7 bits (91), Expect = 0.006
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
Frame = +1
Query: 64 SDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWD 243
S + S S D IWD + + V + P NY D C +++
Sbjct: 67 SRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNY-VACGGLDNICSIYN 125
Query: 244 ARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDG 420
+ + ++ V + G S ++ D C +WD+ ++ + H G
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSG 185
Query: 421 RVSCVSVSPNGVGIATGSWDSSCLIW 498
V +S+SP+ +G+ D+S +W
Sbjct: 186 DVMSLSLSPDMRTFVSGACDASSKLW 211
Score = 30.0 bits (66), Expect = 5.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD ++ + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein beta subunit 1
sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 186 bits (471), Expect = 6e-47
Identities = 87/162 (53%), Positives = 111/162 (68%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++LS F S + D S ++WDIR C Q F GH D+N V FFP
Sbjct: 180 FTGHTGDVMSLSLSPDFRT-FISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ +A+Y+ D I CG TSV+ SKSGRLL AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D +R+ER G+++ HD RVSC+ V+ +G+ + TGSWDS IW
Sbjct: 298 DSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 63.2 bits (152), Expect = 5e-10
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I+ ++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL--DDNQIVTSSGDMTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SLS R I+G D + +WD+ H+ ++ V+
Sbjct: 176 QCTAFTGH--TGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVA 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
P+G ATGS D++C ++ + Q
Sbjct: 234 FFPSGNAFATGSDDATCRLFDIRADQ 259
Score = 35.0 bits (79), Expect = 0.16
Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = +1
Query: 148 GHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARAD---QSIAVYTDDYITCGSTSVSLS 318
GH + + + D+ V++S DG +WD+ +I + + +TC + +
Sbjct: 53 GHLAKIYAMHW-ASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTC-----AYA 106
Query: 319 KSGRLLIAGYDDYNCHVWDV-LREERVGI---MSAHDGRVSCVSVSPNGVGIATGSWDSS 486
SG + G D C ++ + RE V + + H G +SC + I T S D +
Sbjct: 107 PSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN-QIVTSSGDMT 165
Query: 487 CLIWTSKPSQ 516
C +W + Q
Sbjct: 166 CALWDIETGQ 175
>sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1) (XGbeta1)
Length = 340
Score = 185 bits (469), Expect = 1e-46
Identities = 85/162 (52%), Positives = 112/162 (69%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++L+ S F S + D S ++WD+R C Q F GH D+N + FFP
Sbjct: 180 FTGHTGDVMSLSLAPD-SRCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ + VY+ D I CG TSV+ SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 65.1 bits (157), Expect = 1e-10
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ +TSS D TC LWD Q
Sbjct: 118 DNICPIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIITSSGDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SL+ R ++G D + +WDV + H+ ++ +
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDSRCFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259
Score = 30.8 bits (68), Expect = 3.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD +V + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICPIYNLK 127
>sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 185 bits (469), Expect = 1e-46
Identities = 84/162 (51%), Positives = 113/162 (69%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++L+ + +F S + D S ++WD+R C Q F GH D+N + FFP
Sbjct: 180 FAGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ + VY+ D I CG TSV+ SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 65.1 bits (157), Expect = 1e-10
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+ T S+SL+ RL ++G D + +WDV + H+ ++ +
Sbjct: 176 QTTTFAGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD +V + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62873|GBB1_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 184 bits (468), Expect = 1e-46
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++L+ + +F S + D S ++WD+R C Q F GH D+N + FFP
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ + Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 67.0 bits (162), Expect = 4e-11
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SL+ RL ++G D + +WDV + H+ ++ +
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD +V + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 184 bits (468), Expect = 1e-46
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++L+ + +F S + D S ++WD+R C Q F GH D+N + FFP
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ + Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 67.0 bits (162), Expect = 4e-11
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F DN VTSS+D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL-NDNQ-IVTSSEDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SL+ RL ++G D + +WDV + H+ ++ +
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD +V + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>sp|Q5R5W8|GBB1_PONPY Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 184 bits (467), Expect = 2e-46
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++L+ + +F S + D S ++WD+R C Q F GH D+N + FFP
Sbjct: 180 FTGHTGDVMSLSLAPD-TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNG 238
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
N F T SDD TCRL+D RADQ + Y+ D I CG TSVS SKSGRLL+AGYDD+NC+VW
Sbjct: 239 N-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ +R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DALKADRAGVLAGHDDRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 67.0 bits (162), Expect = 4e-11
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ VTSS D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T T S+SL+ RL ++G D + +WDV + H+ ++ +
Sbjct: 176 QTTTFTGH--TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
PNG ATGS D++C ++ + Q
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQ 259
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD +V + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
>sp|O35353|GBB4_RAT Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
chain 4)
Length = 340
Score = 183 bits (465), Expect = 3e-46
Identities = 86/162 (53%), Positives = 109/162 (67%)
Frame = +1
Query: 13 FIGHQNDVTAIALSSARSDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKD 192
F GH DV +++LS F S + D S ++WDIR C Q F GH D+N V FFP
Sbjct: 180 FTGHSGDVMSLSLSPDLKT-FVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPS- 237
Query: 193 NYGFVTSSDDGTCRLWDARADQSIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVW 372
Y F T SDD TCRL+D RADQ + +Y+ D I CG TSV+ SKSGRLL+AGYDD+NC VW
Sbjct: 238 GYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVW 297
Query: 373 DVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIW 498
D L+ R G+++ HD RVSC+ V+ +G+ +ATGSWDS IW
Sbjct: 298 DALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 59.3 bits (142), Expect = 8e-09
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Frame = +1
Query: 91 DKSCRIWDIRSQ----KCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWDARADQ 258
D C I++++++ + + GHT ++ F D+ +TSS D TC LWD Q
Sbjct: 118 DNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFL--DDGQIITSSGDTTCALWDIETGQ 175
Query: 259 SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVS 438
+T + S+SLS + ++G D + +WD+ + H ++ VS
Sbjct: 176 QTTTFTGH--SGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVS 233
Query: 439 VSPNGVGIATGSWDSSCLIWTSKPSQ 516
P+G ATGS D++C ++ + Q
Sbjct: 234 FFPSGYAFATGSDDATCRLFDLRADQ 259
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
Frame = +1
Query: 64 SDMFASVSSDKSCRIWDIRSQKCCQIFEGHTEDVNGVEFFPKDNYGFVTSSDDGTCRLWD 243
S + S S D IWD + + V + P NY D C +++
Sbjct: 67 SRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNY-VACGGLDNICSIYN 125
Query: 244 ARADQ-SIAVYTDDYITCGSTSVSLSKSGRLLIAGYDDYNCHVWDVLREERVGIMSAHDG 420
+ + ++ V + G S +I D C +WD+ ++ + H G
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSG 185
Query: 421 RVSCVSVSPNGVGIATGSWDSSCLIW 498
V +S+SP+ +G+ D+S +W
Sbjct: 186 DVMSLSLSPDLKTFVSGACDASSKLW 211
Score = 30.0 bits (66), Expect = 5.1
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +1
Query: 328 RLLIAGYDDYNCHVWDVLREERVGIMSAHDGRVSCVSVSPNGVGIATGSWDSSCLIWTSK 507
RLL++ D +WD ++ + V + +P+G +A G D+ C I+ K
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,880,389
Number of Sequences: 369166
Number of extensions: 1344304
Number of successful extensions: 6304
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5032
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5072399280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)